Query= MSMg01no524_c10.b1 MSMg01no524_c10.b1 CHROMAT_FILE:
MSMg01no524_c10.b1 PHD_FILE: MSMg01no524_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:20 2005
(665 letters)
>mm_chr17_59611121_59612185
Length = 1065
Score = 1220 bits (631), Expect = 0.0
Identities = 652/659 (98%)
Strand = Plus / Minus
Query: 7 gaattctcattttattaataccacttacagacacctagaatgcaaaaatatagaatggtt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1038 gaattctcattttattaataccacttacagacacctagaatgcaaaaatatagaatggtt 979
Query: 67 ttaataatgcacagaaaagcatgtttcaaaggtctgcctcttgttagacaaatgtgtaat 126
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 978 ttaataatgcacagaaaagcatgttttaaaggtctgcctcttgttagacaaatgtgtaat 919
Query: 127 gatttgggcttaaaaaaatgagtcactcaaccataaataaataaaaaaaaatagaacaac 186
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 gatttgggcttaaaaaattgagtcactcaaccataaataaataaaaaaaaatagaacaac 859
Query: 187 ccatatttggagggtaagaaggaaaatgcaatggtgtttcagcaagcaactgttcatttc 246
|||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 858 ccatatttggagagtaagaaggaaaatgccatggtgtttcagcaagcaactgttcatttc 799
Query: 247 taccatttactctgcatgtgtaagaaaaaatgtggtctgagaataagctcttggatttaa 306
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 798 taccatttactctgcatgtgtaaggaaaaatgtggtctgagaataagctcttggatttaa 739
Query: 307 gtaacactgagtcataattagacagtatatacagatgaagtttacatgtactttgtcctg 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 gtaacactgagtcataattagacagtatatacagatgaagtttacatgtactttgtcctg 679
Query: 367 caacctagaatgttaagattcaataactatttgagatgctttaaacagcagtgacataga 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 caacctagaatgttaagattcaataactatttgagatgctttaaacagcagtgacataga 619
Query: 427 gtttaaagctaacatattttattgtagagtttattatactttacaagttaaaccttgact 486
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gtttaaagctgacatattttattgtagagtttattatactttacaagttaaaccttgact 559
Query: 487 ttgaagagtatttcaccccaagagtagaattacataagaaagaaggacttaattttacta 546
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 558 ttgaagagtatttcaccccaagagtagaattacataagaaagaaggacttaactttacta 499
Query: 547 cttttagaaagagctgtgtagctgagatagtctctaaaacacttgtattcttttcatcac 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 cttttagaaagagctgtgtagctgagatagtctctaaaacacttgtattcttttcatcac 439
Query: 607 tgaagatgaaatcactctaatgtttatgtagggtcaatgctatgactcagtatgtgaag 665
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgaagatgaaatcactctaatgtttatgtagggtcaatgctatgactcagtatgtgaag 380
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no524_c10.g1 MSMg01no524_c10.g1 CHROMAT_FILE:
MSMg01no524_c10.g1 PHD_FILE: MSMg01no524_c10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:58:20 2005
(665 letters)
>mm_chr17_59486816_59487880
Length = 1065
Score = 1255 bits (649), Expect = 0.0
Identities = 662/667 (99%), Gaps = 3/667 (0%)
Strand = Plus / Plus
Query: 1 atctcagatacataaggacttagatgtagacagtcatttcagattaaaaggaattttaag 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atctcagatacgtaaggacttagatgtagacagtcatttcagattaaaaggaattttaag 260
Query: 61 agagagcttatggtgagtaagagccaaagttcaatgctttaaatatgtttttccttaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagagcttatggtgagtaagagccaaagttcaatgctttaaatatgtttttccttaata 320
Query: 121 tattagataatataatctttcataatttttaattttactacaaaggcaattatgtatagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tattagataatataatctttcataatttttaattttactacaaaggcaattatgtatagt 380
Query: 181 caatccccagaattcttgaggaaaaggagattcataaaaggatcatactttattttttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatccccagaattcttgaggaaaaggagattcataaaaggatcatactttattttttac 440
Query: 241 attcagaaacattttatttattattcaaacatacagtgaagtacagagcacacatagatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcagaaacattttatttattattcaaacatacagtgaagtacagagcacacatagatt 500
Query: 301 ctaaggagtgaattagaaagtccttttttattttactcctctccccaaacaggaaagtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctaaggagtgaattagaaagtccttttttattttactcctctccccaaacaggaaagtaa 560
Query: 361 ccatctcctccaccttggccaaaatcatagctatgactgcattgtaacttctatttcttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccatctcctccaccttggccaaaatcatagctatgactgcattgtaacttctatttcttg 620
Query: 421 ctgatttgtaatactgattatcttttaaattttattactccgaattgcccatttctatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgatttgtaatactgattatcttttaaattttattactccgaattgcccatttctatgt 680
Query: 481 tttgaatgttcttagatttctattcttttttttttgttttt--gttttggtttttttggt 538
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||
Sbjct: 681 tttgaatgttcttagatttctattcttttttttttttttttttgttttggtttttt-ggt 739
Query: 539 tttttggtttgacagggtttctctgtgtagccctggctgtcctggaactcactttgtaga 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tttttggtttgacagggtttctctgtgtagccctggctgtcctggaactcactttgtaga 799
Query: 599 tcaggctggcctcgaactcagaaatcagcctgcctctgcctcccaagtgctgggattaaa 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tcaggctggcctcgaactcagaaatcagcctgcctctgcctcccaagtgctgggattaaa 859
Query: 659 ggcgtgc 665
|||||||
Sbjct: 860 ggcgtgc 866
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
