Query= MSMg01no525_a22.b1 MSMg01no525_a22.b1 CHROMAT_FILE:
MSMg01no525_a22.b1 PHD_FILE: MSMg01no525_a22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:31 2005
(572 letters)
>mm_chr17_25755391_25756362
Length = 972
Score = 1073 bits (555), Expect = 0.0
Identities = 565/569 (99%), Gaps = 2/569 (0%)
Strand = Plus / Plus
Query: 4 ggaattctcaggcctgcgcattacccagggggagagagaccccttgcttttcatattgac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcaggcctgcgcattacccagggggagagagaccccttgcttttcatattgac 263
Query: 64 ccctagaatgtgggggtgctgagcacctgcttctctgcacacctcccccctccagcctca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccctagaatgtgggggtgctgagcacctgcttctctgcacacctcccccctccagcctca 323
Query: 124 cggcctccattcggaggagcatgtgtgggtggcagtcccttctccacgtgctccacacgc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cggcctccattcggaggagcatgtgtgggtggcagtcccttctccacgtgctccacacgc 383
Query: 184 ctctcttcctggagagccagccctgctgtgagctttacctgttgaagtgctgcgggccca 243
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 384 ctctcttcctggagagccagccctgctgtgagctttacctgtagaagtgctgcgggccca 443
Query: 244 tgagggtagagacgagacagagagcgtaactctggtaaatagcaagtgaaaggagacatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 444 tgagggtagagacgagacagagagcgtaactctggtaaatagcaagtgaaaggagccatc 503
Query: 304 aggtcggggcggaggggctgtccttacccctggccttgcttctgggctgcgtctctgcag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aggtcggggcggaggggctgtccttacccctggccttgcttctgggctgcgtctctgcag 563
Query: 364 tgtgtcctgagttggcaccagtctctactcagttcctgtctctctgctgttcttaaacac 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtgtcctgagttggcaccagtctctactcagttcctgtctctctgctgttcttaaacac 623
Query: 424 tttgtgctgccaggtttttatttatatatatatatgtaattttaaaattagcatatattt 483
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 624 tttgtgctgccaggtttttatttatatatatat--gtaattttaaaattagcatatattt 681
Query: 484 gccgtataatagaacaggtcccatcgtgacatttccatttaggcacataacatgctagtt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gccgtataatagaacaggtcccatcgtgacatttccatttaggcacataacatgctagtt 741
Query: 544 ctgatactatttgctttatgtttgcttca 572
|||||||||||||||||||||||||||||
Sbjct: 742 ctgatactatttgctttatgtttgcttca 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 572
Length of database: 972
Length adjustment: 10
Effective length of query: 562
Effective length of database: 962
Effective search space: 540644
Effective search space used: 540644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_a22.g1 MSMg01no525_a22.g1 CHROMAT_FILE:
MSMg01no525_a22.g1 PHD_FILE: MSMg01no525_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:32 2005
(472 letters)
>mm_chr17_25929616_25930487
Length = 872
Score = 897 bits (464), Expect = 0.0
Identities = 470/472 (99%)
Strand = Plus / Minus
Query: 1 agtgtgtgggagggctctggtataaatcttccggtggccaggttctgagctggatggagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 agtgtgtgggagggctctggtataaatcttccggtggccaggttctgagctggatggagc 613
Query: 61 agagcctctctgcagaatacatgtacacagaatacatgctgtcttgcgacacctgtcctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 agagcctctctgcagaatacatgtacacagaatacatgctgtcttgcgacacctgtcctg 553
Query: 121 cagatggttttggagggtaacactctgtgcctgggcgatagggtggtggtattgggcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cagatggttttggagggtaacactctgtgcctgggcgatagggtggtggtattgggcatg 493
Query: 181 ttcagtttggaagccatcaccgtctatgctagggatagccgaagaggccatgagtgagca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttcagtttggaagccatcaccgtctatgctagggatagccgaagaggccatgagtgagca 433
Query: 241 tagtcagggaagatctaccattctcagacagttagccttgatgtgggtggtcggggtcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tagtcagggaagatctaccattctcagacagttagccttgatgtgggtggtcggggtcca 373
Query: 301 gcagcttgactcaaggctctatctatttccatgcagggccttactaggagtcactcaacc 360
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 372 gcagcttgactcaaggctctatctgtttccatgcagggccttactaagagtcactcaacc 313
Query: 361 ctttatttttgaaagaaggagatcttccggactcctgggctgtcttccaccctaggctgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctttatttttgaaagaaggagatcttccggactcctgggctgtcttccaccctaggctgg 253
Query: 421 gccctttgccagcacccagtcgctcacatccggccccctccctccgtactca 472
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gccctttgccagcacccagtcgctcacatccggccccctccctccgtactca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 472
Length of database: 872
Length adjustment: 10
Effective length of query: 462
Effective length of database: 862
Effective search space: 398244
Effective search space used: 398244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
