Query= MSMg01no525_c18.b1 MSMg01no525_c18.b1 CHROMAT_FILE:
MSMg01no525_c18.b1 PHD_FILE: MSMg01no525_c18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:41 2005
(649 letters)
>mm_chr17_31151896_31152944
Length = 1049
Score = 975 bits (504), Expect = 0.0
Identities = 535/550 (97%), Gaps = 8/550 (1%)
Strand = Plus / Minus
Query: 11 gaattcagagaggatcagggtgagaggagaagtagactgtgtctaagagatgccaggcta 70
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gaattcagagaggagcagggtgagaggagaagtagactgtgtctaagagatgccaggcta 483
Query: 71 atgagaaggaaaaggtgggctgatctgctggagccggggcagggcctgggagtctgctcc 130
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 482 atgagaaggaaaaggtgggctgatctgctggagccagggcagggcctgggagtctgctcc 423
Query: 131 tctggggaatgtgatgtgcaggctcaggacaagacagctcgctgcagccttgcagggagc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tctggggaatgtgatgtgcaggctcaggacaagacagctcgctgcagccttgcagggagc 363
Query: 191 gcagctgagtaccctgaaagatcaaccataattcagaagggaaaccagccctgagtcagg 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcagctgagtaccctgaaagatcaaccataattcagaagggaaaccagccctgagtcagg 303
Query: 251 ctgtggccatagagaacttgagaaacatctgccagggagtccaggaaccccaagccacac 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ctgtggccatagagaacttgagaaacatctgccagggagtccaggaaccccaagccacac 243
Query: 311 agtggactctgtgcttaaaatgtgatgtctgcagtagccaggtatagcagggctccccac 370
||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 242 agtggactctgtgtttaaaatgtgatgtctgc--------ggtatagcagggctccccac 191
Query: 371 tcacagtgcccatggctcctgctacctgttggttctagcctatcccagcctctcttcctt 430
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tcacagtgcccatggctcctgctacctgttggttctagcctatcccagcctctcttcctt 131
Query: 431 gtggcttagtcgtgcagagtcaaaggaagcaggaagtcaaaagcgggaaacacacatcga 490
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 130 gtggcttagtcgtgcagagtcaaaggaagcaggaagtcaaaagcgggaaacacatatcga 71
Query: 491 cagaactggggtttgtgccagcgcccgggagctacccatgcacagagcgaccggggctca 550
||||||||| || ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 70 cagaactggagtgtgtgccagcgcccgggagccacccatgcacagagcgaccggggctca 11
Query: 551 gacacttgtc 560
||||||||||
Sbjct: 10 gacacttgtc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no525_c18.g1 MSMg01no525_c18.g1 CHROMAT_FILE:
MSMg01no525_c18.g1 PHD_FILE: MSMg01no525_c18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:59:41 2005
(547 letters)
>mm_chr17_30994872_30995818
Length = 947
Score = 1006 bits (520), Expect = 0.0
Identities = 541/548 (98%), Gaps = 1/548 (0%)
Strand = Plus / Plus
Query: 1 ctaccttcacaagaacttacatgtggtagtagatccaggagatcggacgccccattctga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaccttcacaagaacttacatgtggtagtagatccaggagatcggacgccccattctga 260
Query: 61 catccacaggcaccgcgcgcatgcacacagaggtacacagaattaaaatataaaaataaa 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catccacaggcactgcgcgcatgcacacagaggtacacagaattaaaatataaaaataaa 320
Query: 121 tatcttaaagacttattttatatgcatgtgcatgggcatgagagtatgggtgtgtaccac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 tatcttaaagacttattttatatgcatgtgcatgggcatgagagtatgggtgtgcaccac 380
Query: 181 gtgtgtgcagacgcccggaagagtgttgggtcatctagagctggcattacaggcagttgg 240
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgtgtgcagatgctcggaagagtgttgggtcatctagagctggcattacaggcagttgg 440
Query: 241 gaaccaactagtgtaggcgctgttcaccacacctgggccttccacaggagcggcaagtgt 300
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 gaaccacctagtgtaggcgctgttcaccacacctgggccttccataggagcggcaagtgt 500
Query: 301 ggttgagcaccgagcaatctccacagtcgctaaattcttcttaaagatgtttgagttttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggttgagcaccgagcaatctccacagtcgctaaattcttcttaaagatgtttgagttttt 560
Query: 361 agatgtgcattttagtgctgcccaccagtaagacaaa-cccctttcacgttctttttcct 419
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 561 agatgtgcattttagtgctgcccaccagtaagacaaaacccctttcacgttctttttcct 620
Query: 420 tctacgtccatgcgacttttgtattttctctcagggctgcaccttagaaagtccacactg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctacgtccatgcgacttttgtattttctctcagggctgcaccttagaaagtccacactg 680
Query: 480 aattcaagccaacactaccctttctagacacgcacacccacacccttatctgtgattgat 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aattcaagccaacactaccctttctagacacgcacacccacacccttatctgtgattgat 740
Query: 540 ttctgctt 547
||||||||
Sbjct: 741 ttctgctt 748
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
