Query= MSMg01no527_c20.b1 MSMg01no527_c20.b1 CHROMAT_FILE:
MSMg01no527_c20.b1 PHD_FILE: MSMg01no527_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:20 2005
(715 letters)
>mm_chr17_46523268_46524382
Length = 1115
Score = 1359 bits (703), Expect = 0.0
Identities = 709/711 (99%)
Strand = Plus / Plus
Query: 5 gaattctaggattgccagggctatacagaaactgtctcaagagatttttttcctcttaag 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaggacagccagggctatacagaaactgtctcaagagatttttttcctcttaag 264
Query: 65 gaaacttctaaattcttttttattgtagaatggtcccttaccgtgatagacaacaatttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaacttctaaattcttttttattgtagaatggtcccttaccgtgatagacaacaatttt 324
Query: 125 ataagtaaggagaacattttgggcatagagatgtgttcatgttttcacttttgttttaac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ataagtaaggagaacattttgggcatagagatgtgttcatgttttcacttttgttttaac 384
Query: 185 tttttgtagagacgttctcctggtctgtgttctgattcttctttggaggagagtttaagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttttgtagagacgttctcctggtctgtgttctgattcttctttggaggagagtttaagg 444
Query: 245 atcacagttggcaatgaccacttctgtgttagcacaccagagcggcggcggctcagtgac 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atcacagttggcaatgaccacttctgtgttagcacaccagagcggcggcggctcagtgac 504
Query: 305 cggctgggatctccagtggatggtctgcaggacatggacaggtaggcttcagctatggca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cggctgggatctccagtggatggtctgcaggacatggacaggtaggcttcagctatggca 564
Query: 365 ggtgcaccatacttgctctggaaggcagaatattgttgttttctgagtgatgtatctgaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ggtgcaccatacttgctctggaaggcagaatattgttgttttctgagtgatgtatctgaa 624
Query: 425 agttggtgccagcactgaagtcaaacagtatctgtgtccagtggaagatagaacactgga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 agttggtgccagcactgaagtcaaacagtatctgtgtccagtggaagatagaacactgga 684
Query: 485 aaaggctttctgagtgggaagagtatgttgatatagattctgtttctgaatataatgtat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaaggctttctgagtgggaagagtatgttgatatagattctgtttctgaatataatgtat 744
Query: 545 gctagaaaaagaacatcatggtacaagtagaaagagaagctaagggaacataaatcaaat 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gctagaaaaagaacatcatggtacaagtagaaagagaagctaagggaacataaatcaaat 804
Query: 605 attggattaaaatctaaaaagatccccttatacaatgaaggttttggacaaaatggaaag 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 attggattaaaatctaaaaagatccccttatacaatgaaggttttggacaaaatggaaag 864
Query: 665 tctcttttttttccctcctcctcttcctcttcttcttcctctccctcctcc 715
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tctcttttttttccctcctcctcttcctcttcttcttcctctccctcctcc 915
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 715
Length of database: 1115
Length adjustment: 10
Effective length of query: 705
Effective length of database: 1105
Effective search space: 779025
Effective search space used: 779025
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no527_c20.g1 MSMg01no527_c20.g1 CHROMAT_FILE:
MSMg01no527_c20.g1 PHD_FILE: MSMg01no527_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:20 2005
(588 letters)
>mm_chr17_46695901_46696888
Length = 988
Score = 557 bits (288), Expect = e-163
Identities = 320/334 (95%), Gaps = 10/334 (2%)
Strand = Plus / Minus
Query: 3 tgccagcctgtgatcatcgagactttgatactggatacttaacttggtgttttgttcttg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tgccagcctgtgatcatcgagactttgatactggatacttaacttggtgttttgttcttg 267
Query: 63 gctacacgggtaagtgcggcagccacaggatagccttgactgtcattcctcagcgcctgt 122
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gctacacgggtaagtgtggcagccacaggatagccttgactgtcattcctcagcgcctgt 207
Query: 123 ccacttctttctttctttacttctttctttctttttttttttaaagatttatttattata 182
||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||
Sbjct: 206 ccacttctttctttctt--c--ctttctt--tttttttttttaaagatttatttattata 153
Query: 183 tgtaagtacactgtagctgtcttcaggcacaccagaagaag--atgtcagatctcattac 240
||||||||||||| |||||||||||| |||||||||||| | | ||||||||||||||
Sbjct: 152 tgtaagtacactgcagctgtcttcagacacaccagaagagggca--tcagatctcattac 95
Query: 241 gagtggttgtgagccaccatgtggttgctgggatttgaactcaggaccttcggaagagca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 gagtggttgtgagccaccatgtggttgctgggatttgaactcaggaccttcggaagagca 35
Query: 301 gtcagtgctcttacccgctgagccatttcgccag 334
||||||||||||||||||||||||||||||||||
Sbjct: 34 gtcagtgctcttacccgctgagccatttcgccag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
