Query= MSMg01no529_e08.b1 MSMg01no529_e08.b1 CHROMAT_FILE:
MSMg01no529_e08.b1 PHD_FILE: MSMg01no529_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:10 2005
(665 letters)
>mm_chr17_36153472_36154536
Length = 1065
Score = 1241 bits (642), Expect = 0.0
Identities = 657/662 (99%)
Strand = Plus / Plus
Query: 4 ggaattcactatgtttccccctaactggccttgactttgaggcaaccctcctgcctcagc 63
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactatgtgtagccctaactggccttgactttgaggcaaccctcctgcctcagc 263
Query: 64 cttcccagtgctgggaggaattacagtgtgaatcactgtgcctgtcttctgtattcctca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cttcccagtgctgggaggaattacagtgtgaatcactgtgcctgtcttctgtattcctca 323
Query: 124 tagatgcatatcagtttcatctcagttttgaaacttgctgacattgggtgtctcctgcgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tagatgcatatcagtttcatctcagttttgaaacttgctgacattgggtgtctcctgcgt 383
Query: 184 gcttcagtcagggaaggtaaatgtttgtgcgtctcatttgggtttcaaagaggcgctggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcttcagtcagggaaggtaaatgtttgtgcgtctcatttgggtttcaaagaggcgctggc 443
Query: 244 ctcagggtcacaagggtcttcagacattagagtgccttcccatagaagttgaaagcactt 303
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 444 ctcagggtcacaagggtcttcagacattagagtgccttcccatagaagttgtaagcactt 503
Query: 304 tgaaggcaaagggttacttatgatgcagcctctgaaaaaatgcacactgtgtgtacatct 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgaaggcaaagggttacttatgatgcagcctctgaaaaaatgcacactgtgtgtacatct 563
Query: 364 gcgactcatttgacaggtaaatgtcaaatagactctgagctctgggagcagatgtggcca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gcgactcatttgacaggtaaatgtcaaatagactctgagctctgggagcagatgtggcca 623
Query: 424 gcctgttctcaagggacagtctgctgtcagggcactgagggactaggtgaggcagctaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gcctgttctcaagggacagtctgctgtcagggcactgagggactaggtgaggcagctaag 683
Query: 484 ttgtttcctgcctccaatccctggcacatacctgcttgctggcggaagccatctgctctc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttgtttcctgcctccaatccctggcacatacctgcttgctggcggaagccatctgctctc 743
Query: 544 tgactctgggtaccagagctgttgtagtattgctgaatgtttctcaggctcaactggaaa 603
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 744 tgactctgggtaccagagctgttgtagtattgccgaatgtttctcaggctcaactggaaa 803
Query: 604 atcttcatccgattggtgaaaacctcagtctcatgagtgaagtactgtgcattttccctc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 atcttcatccgattggtgaaaacctcagtctcatgagtgaagtactgtgcattttccctc 863
Query: 664 ag 665
||
Sbjct: 864 ag 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no529_e08.g1 MSMg01no529_e08.g1 CHROMAT_FILE:
MSMg01no529_e08.g1 PHD_FILE: MSMg01no529_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:10 2005
(469 letters)
>mm_chr17_36350746_36351614
Length = 869
Score = 692 bits (358), Expect = 0.0
Identities = 415/434 (95%), Gaps = 5/434 (1%)
Strand = Plus / Minus
Query: 1 tttacccattaccagagattggctcagccttctctcaggacagctcacagagggtcttag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tttacccattaccagagattggctcagccttctctcaggacagctcacagagggtcttag 374
Query: 61 gagggaaaataaccaaggcagttaaccttccacctgcagtcctcatgaggctgaggtaca 120
|||||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 373 gagggaaaataaccaaagcagttaaccttccacctacagtccttgtgaggctgaggtaca 314
Query: 121 agtgctatgtgcatatgaggggctgcctgagcccctcaccctaagatggggtaagggaag 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 agtgctatgtgcatatgaggggctgcctgagcccctcaccctaagatggggtaagggaaa 254
Query: 181 gctggagccttctgcagacctgtggggagaaacaaggatgatggctgtggtcacatcccc 240
|||||||||||||||| ||||||| ||||||| |||||||||||||||||| |||| |
Sbjct: 253 gctggagccttctgcaaacctgtgacaagaaacagggatgatggctgtggtcatatcctc 194
Query: 241 tcaccttcccttcctttcagct-ccttccctttccctttctttccctttcccttccccct 299
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 193 tcaccttcccttcctttcagcttccttccctttccctttctttccctttcccttccccct 134
Query: 300 cctcctttcctttcccttccccc-ct-ccttctcttctccttccccttcctccttccctt 357
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 133 cctcctttcctttcccttccccctcttccttctcttctccttccccttcctccttccctt 74
Query: 358 ttccttccccttcctacttc-cactctatttccccttcctccttcctttctacttcccct 416
|||||||||||||||| || | |||||||||||||||||||||||||||||||||||||
Sbjct: 73 ctccttccccttcctacctctc-ctctatttccccttcctccttcctttctacttcccct 15
Query: 417 ctccccttccctcc 430
||||||||||||||
Sbjct: 14 ctccccttccctcc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
