NAACTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGCGC
GGAATTCAAGGCTATCCCAAGACACATGAGACCTCATCTTATTGAAATTA
AAATCTAATCTTCCCTTCTCTTCCCTTCCCCCTTCCCCCTTACCCCTTAG
CCCTGGAGGAGGATCGGGGGGAGGGGGGGGGGGGAGTGGCTGGGGAGAGA
GGAGGGGTAGAGAGGTGGGAGGGAAGAGGTTGGGCGGGGGTGGCGGAAGA
GGAGTGAGGTGGGGATAGCGCCAGGTGTGGAAGGGAGGGAGGAAGGGGGG
TGGGAGGAGGGAGGATGGAGGGGTTGTTTTGTAGCTGAGAGGAGGGGAAG
GAGAGTTGGAAGGTGTGAGGAGAGAGGGGAGGGTAAAGTTGAGTTTGGGG
GAAAGGATTTTCGTGGAGAAGACAGGGGAGGATTTGGAGTTGTGGAGGGG
GGAGGGGAGCGAGCGGGGTGGGGGGGGAAAGATGGAGGGGTTTTTTTTGG
GAGGGGAGAGTGTGTGGGATTGGAGGAGAGGGTGAGGATGGGGGCGGGTA
GGGGTGGTGGATAGGTGTTAGTAGGAGTAAGGAGTGAGGTTTGGGAGATA
GAGGGAAGGGTGGGGGGAGGGGGAGGGGTATGATGGTGGGTTTTGGTGAT
GGGATGATTATAAACGGGGAGTGGGGGAGTGGTTGGAGAGATTTGTACAT
AAGAATGGAGGAAGGGGGGGAGAGGGGGGGTGGGTGTAGGTGGGGGGGGG
GGGGAAGGGTGGGTGAGGGTATGGGCTGGAAGAAAAATGATTGGTGG

CACCATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXACACTTTTAATTTTCCATTACA
GAAATTTCCAATTCGACTTCTTCATTTTCTATCTGATAAAAATTAACTCC
TTCCTGCCAGAGTCATCATCAGAGACACCAAAAGAAATAGCTTGCCAAAT
AATATTGTCAAACCTTTTTGAAAGACTATCTTCTTCTGTGGCTCCGGAAG
ATCAGCTATTCAGGAATATCTTCATTTCTACAAAAGAAAGACCATACTAT
TTAGAAACACAGAGACATAAACACATATTTATTACACCAGAGACAGAACA
GCACAATTGGACACTTTAATTACAGATTGGATCTTTTGTTGATTTTGTTA
GAAAGAACTATCACTGATAAGACACCAGACAATTCTCAGTTATTTAGGGT
GCCGCTCATCATCTGGCTAGTCACTCAATCTCAATGTTCCCCCCTTTGCT
CAAAACATTTTTCCATTGCAAAACCAGCAGACACAGGCACGGGACGTATG
TGTTTAGTGTATTTATATTTCCAAAGCCTTTTAGAACTAAACACACATAA
GCACACAGGGTTGGCTTTCCACTGTCTTGTTCCTTATTCGCTATACTGCT
AATGTGAGTGCGGTATTGTTTATCCTTTGCCTAAGAATCTATTAGTATCT
TTTTTTCTGCCTTCAGGTAGAAGCACAGCAAGAACGCTGGAGAAATTAT

Query= MSMg01no529_k11.g1 MSMg01no529_k11.g1 CHROMAT_FILE:
MSMg01no529_k11.g1 PHD_FILE: MSMg01no529_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:05:43 2005
         (671 letters)



>mm_chr17_3582897_3583967
          Length = 1071

 Score = 1243 bits (643), Expect = 0.0
 Identities = 664/671 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   acacttttaattttccattacagaaatttccaattcgacttcttcattttctatctgata 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 acacttttaattttccattacagaaatttccaattcgacttcttcattttctatctgata 812

                                                                       
Query: 61  aaaattaactccttcctgccagagtcatcatcagagacaccaaaagaaatagcttgccaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 aaaattaactccttcctgccagagtcatcatcagagacaccaaaagaaatagcttgccaa 752

                                                                       
Query: 121 ataatattgtcaaacctttttgaaagactatcttcttctgtggctccggaagatcagcta 180
           |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 751 ataatattgtcaaacctttttgaaagactatctttttctgtggctcgggaagatcagcta 692

                                                                       
Query: 181 ttcaggaatatcttcatttctacaaaagaaagaccatactatttagaaacacagagacat 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 691 ttcaggaatatcttcatttctacaaaagaaagaccatactatttagaaacacagggacat 632

                                                                       
Query: 241 aaacacatatttattacaccagagacagaacagcacaattggacactttaattacagatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 aaacacatatttattacaccagagacagaacagcacaattggacactttaattacagatt 572

                                                                       
Query: 301 ggatcttttgttgattttgttagaaagaactatcactgataagacaccagacaattctca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggatcttttgttgattttgttagaaagaactatcactgataagacaccagacaattctca 512

                                                                       
Query: 361 gttatttagggtgccgctcatcatctggctagtcactcaatctcaatgttcccccctttg 420
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 511 gttatttagggtgccgctcatcatctggctggtcactcaatctcaatgttcccccctttg 452

                                                                       
Query: 421 ctcaaaacatttttccattgcaaaaccagcagacacaggcacgggacgtatgtgtttagt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ctcaaaacatttttccattgcaaaaccagcagacacaggcacgggacgtatgtgtttagt 392

                                                                       
Query: 481 gtatttatatttccaaagccttttagaactaaacacacataagcacacagggttggcttt 540
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 391 gtatttatatttccaaagccttttagaactaaacacacatacgcacacagggttggcttt 332

                                                                       
Query: 541 ccactgtcttgttccttattcgctatactgctaatgtgagtgcggtattgtttatccttt 600
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 331 ccactgtcttgttccttattcgctatactgctaacgtgagtgcggtattgtttatccttt 272

                                                                       
Query: 601 gcctaagaatctattagtatctttttttctgccttcaggtagaagcacagcaagaacgct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 271 gcctaagaatctattagtatctttttttctgccttcaggtagaagcacagcaagaacact 212

                      
Query: 661 ggagaaattat 671
           |||||||||||
Sbjct: 211 ggagaaattat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space:   701321
Effective search space used:   701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)