Query= MSMg01no531_b01.b1 MSMg01no531_b01.b1 CHROMAT_FILE:
MSMg01no531_b01.b1 PHD_FILE: MSMg01no531_b01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:35 2005
(689 letters)
>mm_chr17_63185243_63186331
Length = 1089
Score = 1278 bits (661), Expect = 0.0
Identities = 679/685 (99%)
Strand = Plus / Plus
Query: 5 gaattctcttatattggtgcaactaactttaaaacaataatagcacttaccaattgttga 64
||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcttagaatggtgcaactaactttaaaacaataatagcacttaccaattgttga 264
Query: 65 ctatttccattataccactatggtggctgagatctttgcaacttatgacttcgttctcta 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctatttccattataccactatggtggctgagatctttgcaacttatgacttcgttctcta 324
Query: 125 actgaatccttctaacaaagtgccatgtcattattatgcttttgtttttatgtcttaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 325 actgaatccttctaacaaagtgccatgtcattattatgcttttgtttttatgtcttagaa 384
Query: 185 aaccgaggtggactaaacttcatccgtggagctggggtattccaattaggcttcaagccc 244
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aacagaggtggactaaacttcatccgtggagctggggtattccaattaggcttcaagccc 444
Query: 245 agacttagagaataccaaagcagttctcctcaccatgacagagcatctcctcttcagctg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agacttagagaataccaaagcagttctcctcaccatgacagagcatctcctcttcagctg 504
Query: 305 ggccttatggctttcattttatgtaggcatgccaccatgaaggtgctaatgaacagaaag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggccttatggctttcattttatgtaggcatgccaccatgaaggtgctaatgaacagaaag 564
Query: 365 ctggggcaacagagagacagaagcgctcactgctaatgttttccttgacactcagagtag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctggggcaacagagagacagaagcgctcactgctaatgttttccttgacactcagagtag 624
Query: 425 cctccagtcaacttcactttttagggcctagtgtttcctctcccaacaatgtacctaaga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cctccagtcaacttcactttttagggcctagtgtttcctctcccaacaatgtacctaaga 684
Query: 485 ggaagtcaccttctcatgttcaccttgacgagccaacttcacacagtctccccttgtttt 544
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gggagtcaccttctcatgttcaccttgacgagccaacttcacacagtctccccttgtttt 744
Query: 545 catgcaatgttctctctgcccttccttaagggagcaagttcagatcaacatgagaagtgt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 catgcaatgttctctctgcccttccttaagggagcaagttcagatcaacatgagaagtgt 804
Query: 605 gtgcggagtgccagacccttacctattttcagcctcctagtttagaagccgaaaataaat 664
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gtgcagagtgccagacccttacctattttcagcctcctagtttagaagccgaaaataaat 864
Query: 665 caagtgagatgcatagaaaaactct 689
|||||||||||||||||||||||||
Sbjct: 865 caagtgagatgcatagaaaaactct 889
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space: 732641
Effective search space used: 732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no531_b01.g1 MSMg01no531_b01.g1 CHROMAT_FILE:
MSMg01no531_b01.g1 PHD_FILE: MSMg01no531_b01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:07:35 2005
(519 letters)
>mm_chr17_63361442_63362360
Length = 919
Score = 797 bits (412), Expect = 0.0
Identities = 457/494 (92%), Gaps = 34/494 (6%)
Strand = Plus / Minus
Query: 60 ttctctcttttgtgtattgttcttatccagaaccccatccttattttagctctgaacata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 919 ttctctcttttgtgtattgttcttatccagaaccccatccttattttagctctgaacata 860
Query: 120 ttcttggtattttgtaaaagttaataataatgcatttccattacatgtatttgccccata 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 859 ttcttggtattttgtaaaagttaataataatgcatttccattacatgtatttgccccaca 800
Query: 180 actatccccagatatataaat----------------------------------gagag 205
||||||||||||||||||||| |||||
Sbjct: 799 actatccccagatatataaatctgagagagagagagagagagagagagagagagagagag 740
Query: 206 agagagagagagagagagatatgccatggatatttataatattcgactcactccagaatg 265
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 agagagagagagagagagagatgccatggatatttataatattcgactcactccagaatg 680
Query: 266 attctgagattctgttgggtcagccatctggcccctgtactacaggctgtcttgtgtctg 325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 attctgagattctgttgggtcagccatctggcccctgtactacaggctgtcttgtgtctg 620
Query: 326 actgcagtgtctcccaaccttctatctccttatttaattgggtgacagctttgctttggt 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 actgcagtgtctcccaaccttctatctccttatttaattgggtgacagctttgctttggt 560
Query: 386 ggtcaaatccagcccccaacctgcttgacctttttctctcgtggagagccaatcctgaaa 445
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 559 ggtcaaatccagcccccaacctgcttgacctttttctctcatggagagccaatcctgaaa 500
Query: 446 cggttacattgagcaccgtcaagggggtggttgcatgccagaggtggaggatggagagtg 505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cggttacattgagcaccgtcaagggggtggttgcatgccagaggtggaggatggagagtg 440
Query: 506 ggaaagggaggaga 519
||||||||||||||
Sbjct: 439 ggaaagggaggaga 426
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|