Query= MSMg01no536_o15.b1 MSMg01no536_o15.b1 CHROMAT_FILE:
MSMg01no536_o15.b1 PHD_FILE: MSMg01no536_o15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:09 2005
(631 letters)
>mm_chr17_80130838_80131868
Length = 1031
Score = 1098 bits (568), Expect = 0.0
Identities = 616/636 (96%), Gaps = 11/636 (1%)
Strand = Plus / Plus
Query: 4 gaattctgcctgctct-cctgcaaaaaaa-------aa-aa-aatgctaccacccatggt 53
|||||||||||||| | | |||||||||| || || ||||||||||||||||||
Sbjct: 195 gaattctgcctgct-tacatgcaaaaaaataataataataataatgctaccacccatggt 253
Query: 54 tcctttggagacaacgaggacttggaaagggaatgaatgatttcatttctgtcggctgaa 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tcctttggagacaacgaggacttggaaagggaatgaatgatttcatttctgtcggctgaa 313
Query: 114 agcaactccagaccggctcgcacatcgccaccttattttgatttgaaagcaaggttacgg 173
||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 314 agcaactccagaccggctctcacatcgccgccttattttgatttgaaagcaaggttatgg 373
Query: 174 ggacattcgagtgtacagaaagaaccctctcagaagcacaattccctaatgtatcacacc 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggacattcgagtgtacagaaagaaccctctcagaagcacaattccctaatgtatcacacg 433
Query: 234 atgcatggtatagacactggactagccatggtattaagtcgggtagtgtcttcactctga 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gtgcatggtatagacactggactagccatggtattaagtcgggtagtgtcttcactctga 493
Query: 294 tggaagtcttcattcatagtagggggatctcttacatttcagccattattagcagcaaaa 353
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tggaagtcttcattcatggtagggggatctcttacatttcagccattattagcagcaaaa 553
Query: 354 tgtgaaaggaaaacaggtgggtgtattgaccttgtggaagcagtaacagtttctaacctt 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tgtgaaaggaaaacaggtgggtgtattgaccttgtggaagcagtaacagtttctaacctt 613
Query: 414 gtggaagcagtaacagtttctaaccttgtggaagcagtaacagttcctattttgcacctt 473
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 614 gtggaagcaggaacagtttctaaccttgtggaagcagtaacagtttctattttgcacctt 673
Query: 474 tcctctgtggcatgtgatacatttcacacactcactaaaaactgagaaaataagccgttc 533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 tcctctgtggcatgtgatacatttcacacactcactaaaaactgagaaaataagccgttc 733
Query: 534 cttaagtaacacaaaacagctcatttatgaatctaagaggattaaggaatatggttttac 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 cttaagtaacacaaaacagctcatttatgaatctaagaggattaaggaatatggttttac 793
Query: 594 tgtgtttgtttagagcctgtgccaaccttttttttt 629
||||||||||||||||||||||||||||||||||||
Sbjct: 794 tgtgtttgtttagagcctgtgccaaccttttttttt 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1031
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1021
Effective search space: 634041
Effective search space used: 634041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no536_o15.g1 MSMg01no536_o15.g1 CHROMAT_FILE:
MSMg01no536_o15.g1 PHD_FILE: MSMg01no536_o15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:09 2005
(469 letters)
>mm_chr17_80291120_80291988
Length = 869
Score = 845 bits (437), Expect = 0.0
Identities = 461/469 (98%)
Strand = Plus / Minus
Query: 1 atttctgaagctttgtttcatctcctattctcttttgccaccgagataggaacctgaacg 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 atttctgaagttttgtttcatctcctattctcttttgccaccgagataggaacctgaacg 610
Query: 61 ctgggtgacaggtcctatttgttgcttaacaaaatactttaaaaaccctgcattttattt 120
||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||
Sbjct: 609 ctgggtgacaggtcctatttgttacttaacaaaatactttaaaacccctgcattttattt 550
Query: 121 cttaaagcccgctcttctggggagggagttcagtgctgttcccactggagggcgtgtgtg 180
|||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 549 cttaaagctcgctcttctggggagggagttcagtgctgttcccactggagggcgagtgtg 490
Query: 181 ctgtctctccagttactgaagcttctcggtacttactccatttctcaccaggtttagagg 240
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 489 ctgtctctccagttactgaagcttctcagtacttgctccatttctcaccaggtttagagg 430
Query: 241 aggtgagggccattcggtggattgccacatatgattgattagatatggctgactgctgag 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 429 aggtgagggccattcggtggattgccacatatgattgattagatatggctgactgctgtg 370
Query: 301 ggagtgaagtcagtgggctgggctttcttgtttgctttccgtgtcgcgcttaagattgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ggagtgaagtcagtgggctgggctttcttgtttgctttccgtgtcgcgcttaagattgac 310
Query: 361 ccatgcccttgcctgcagagccaaccacagagctgtagtagccatacttcccttgaaatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ccatgcccttgcctgcagagccaaccacagagctgtagtagccatacttcccttgaaatg 250
Query: 421 aaaagtaggcaggccaaggtggggtctgtgcaaagagaaggcagtgaag 469
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aaaagtaggcaggccaaggtggggtctgtgcaaagagaaggcagtgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
