TTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCATAAAATATGTCACACCATTGTCTTATATAGACTTTAGGTTG
AAAAAGAAAGTCCCTTCACAACGAAGGTCCAGAATGAGGAAGACCAACAC
CCAAGGAACTCTATGCCCTTTTCTTCCTTGACTTTGATAGCTGGGGGTTA
CGTACTGGACGATGCATCGTGTATAGGATGCGTTTCCAATGACAACATGA
AACAAGTGTGCTTTTCTCATAAAAAAATATGCTTCCCACTGGAAGCCAGT
TTGTTTTGTAAACTGCAACTGAAAGGCCTTCTGGGGTAATACTTAGGAAA
AGCAACCAAGAGAGAACTCACCGGGGCCAGCAGTGTTGCTCAGTGACAGA
CAGTGGGGTAACTAGGTATAGGCCCTGCCCTGCCCTGCCCTGCCCTGCCC
TGCCCTGCCCTGCCCTGCCCTGCCCTGCCCCTCANGACCATTTTTGCAAA
ATGTAAATTGATAAAGTCAAGCGCTCTGGTTTTCCTGGGTTCTCTGCCAC
ATTCTTTACATGCACACATGTCTGCATCTGTCACTTGGGCTCTCCTCATA
CACCAAGGTGGAAAGCGAATACAATAACTGGTGTCTTCCCCACTGGGCGG
GGAGATGGTTGGTCCAACTGTCTTACTCTGGGGGTGACTTCCTACATTGC
AGTTTAATAAAAGTGAGCTTGTGTGAAACAAGGTTCGGGAATGGGACTGT
ACGGAGCATCCAGGCTTATTCTGTATCCCTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXTGAAGGTAAACCCTCAGGAATGGTATAGCTGGATCATACAAATC
ATATGTGTTTTAGTTATTAGAGGATCTGCCATACTTCTTTCTACAATGGC
TAAAATAATTTTCCTTCCCAGCAACAGTGTTTAAGGGTTCCCATTTGTCT
ACATTCTTGTCTTTATTTATTATTTGTCTTGTTCAGGCCACTGTCATTCT
GACTAGAGAGAGATCAAATCTCACTGTACTAACCAGCCTTTTTCTCCTGG
TGAGATTGGATTTCTTTCTTTCATAAGATTATCCGTTATTTGTCTCTCAT
CTTTTGGGAACTCTGTTCATTTTGTTAGGCTTGTTTGGTTGCTTGCCTAG
TTTGTTTGTTTGAATTCTCTGTGTAGATGCTAATCCTCTGTCATGTGTAC
AGCTACCAAAGACTTTCTTCCATTCTCTAGATTCTACAGAAACTTTAATA
TCATGGGGTCCCAACTTGTCAGCTGTTAGCATTCTTTCCTAAACAACTGA
AGTTCTGCTGAGAAAGTCTTTGCCTATGTCAGGATCTTTAAGTATGCTCT
CTATTTTTACCTCCAACAATTCTGGAAACCAACTCTTACATTAACCTCTT
TGATCCATGGCAAGTTGATAAAATTTTTAATATTTGACTTTTTAGTAAAA
ATAAAATGACTACATTAAGTTGTAGCTGAGTTTTGCAGACAATTCATCCA
AGTCCTCCTTTTGT

Query= MSMg01no536_p12.b1 MSMg01no536_p12.b1 CHROMAT_FILE:
MSMg01no536_p12.b1 PHD_FILE: MSMg01no536_p12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:15:13 2005
         (617 letters)



>mm_chr17_64886422_64887438
          Length = 1017

 Score = 1038 bits (537), Expect = 0.0
 Identities = 596/618 (96%), Gaps = 5/618 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcataaaatatgtcacaccattgtcttatatagactttaggttgaaaaagaaagtc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gaattcataaaatatgtcacaccattgtcttatatagactttaggttgaaaaagaaagtc 259

                                                                       
Query: 65  ccttcacaacgaaggtccagaatgaggaagaccaacacccaaggaactctatgccctttt 124
           |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 260 ccttcacaacgaaggtccagaaggaggaagaccaacatccaaggaactctatgccctttt 319

                                                                       
Query: 125 cttccttgactttgatagctgggggttacgtactggacgatgcatcgtgtataggatgcg 184
           |||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||| 
Sbjct: 320 cttccttgaccttgatacctgggggttacgtactggacaatgcatcatgtataggatgca 379

                                                                       
Query: 185 tttccaatgacaacatgaaacaagtgtgcttttctcataaaaaaatatgcttcccactgg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tttccaatgacaacatgaaacaagtgtgcttttctcataaaaaaatatgcttcccactgg 439

                                                                       
Query: 245 aagccagtttgttttgtaaactgcaactgaaaggccttctggggtaatacttaggaaaag 304
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 440 aagccagtttgttttgtaaactgcaactgaaaggccttttggggtaatacttaggaaaag 499

                                                                       
Query: 305 caaccaagagagaactcaccggggccagcagtgttgctcagtgacagacagtggggtaac 364
           ||||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||||
Sbjct: 500 caaccaagagaaaactcaccagggccagcagtgttgatcagtgacagacagtgaggtaac 559

                                                                       
Query: 365 taggtatagg-cc----ctgccctgccctgccctgccctgccctgccctgccctgccctg 419
           |||||||||| ||    |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 taggtataggtcctgcactgccctgccctgccctgccctgccctgccctgccctgccctg 619

                                                                       
Query: 420 ccctgccctgcccctcangaccatttttgcaaaatgtaaattgataaagtcaagcgctct 479
           |||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 620 ccctgccccgcccctcaggaccatttttgcaaaatgtaaattgatgaagtcaagcgctct 679

                                                                       
Query: 480 ggttttcctgggttctctgccacattctttacatgcacacatgtctgcatctgtcacttg 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ggttttcctgggttctctgccacattctttacatgcacacatgtctgcatctgtcacttg 739

                                                                       
Query: 540 ggctctcctcatacaccaaggtggaaagcgaatacaataactggtgtcttccccactggg 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 740 ggctctcctcatacaccaaggtggaaagcgaatacaataactggtgtcttccccattggg 799

                             
Query: 600 cggggagatggttggtcc 617
           ||||||| ||||||||||
Sbjct: 800 cggggagttggttggtcc 817


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space:   611249
Effective search space used:   611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)