NNAAATTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCACTGATTTATCGAGTTCCCATCTGGAAACTCTTGCTTGCA
GGGCTCAAAACCCAGTGTTCCAGGTCCTATGTAGATAGTGTGAGTATCAG
GGAAGAGTCTCAGCAGGAAACATTCTCTTGTGTGTGTACACACACACACA
CACACACACACACACACACACACACACACACACACACTTTTGACTGGATA
GAATAAATGAAAAGTTCAACTTTAAGTAGCCAAGAAATCTGAAATACTCT
TTCAAGTGAATATGAAAATCAGCTTTGATCTAATGTGTAAAATCTAGCCA
CACTTAAGAATCTTACCAAATGTCATCATTTGAGGGAGGGAATTGTAAAC
GTTCCCCATGAAACAGTCAGACTGCAGAACCATCTAAGACCGGTTCACAC
CACAGAACGGTTCACACCACAGAACAGCCTGCCTGTTTCAATCCAGTCAC
TGTTTGAAGTGTCTAAAGGTGCAGATATCGTCATGTCATGAACTGTTTTC
AGTTCCTTCTTCAGCAGCTGGGACATGGCTCTGCCCACTAAGCCTTCCTG
GAACACTAGGGCCCTGGCTTTGAAGCCCCTGATACAAAGTCAAACACAGT
TTCCTCTTTCTCAGGGACAAATGAAACAGCATAACTTGGGGGGCTTCCCC
TGTGTCCATTCATCCTCTTTTCCCAAAAAAATTCTGCTGGGG

TTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXACTGTGGACAC
AGCTTCGTTTATTCTCTTTATACCCCAACCTTCTCGGAGGGATGTTCAGG
AACGCCTCCATCTCTCGTCAGCTTGTAACCTCCGTCCTGTTCCTTCAGCA
AAACTCGGCAAGCAGGTGCAAGCAGCTTCCCAGTGGGGTGGGTAGAAACA
GACAGAGAAGAAAATTCGAAGCCGTGAGACTGAATGTGACAGTGACATCA
GTCGGTCAGAGTCCCTATTCAGTTCCATCACTGTCAACTTGAAACAAGTC
GCTTACCTTGGAAGCCTAAGCTTCATCTCTGAGATAGGGACAATGACACA
CCCACATCATAGGGCCCCCACCCCAGTATGTGCTGCCCTGCAGTGAGACA
CATGGACCTTGGATTTGACGTTCCATTACTCTTCAATAACTCGGTTCATG
GTTTTTATAATGCCATCTGTAGAAAGGGGGACTTGATAAAATCAGCCTGA
CTGGCGGACTACAGAGAAAGCAGGATGAGCACTGAGGGTGAGATGCCAAA
GCTTTTTTTTTAAGATCTATTTATTTATTTTATGTATATGAGTACACTGT
AGCTGTACAGATGGTTGTGAGCCATCACATGGTTGCTGGGAATTGAACTC
AGGACCTTCAGAAGAGCAGTCAGTGGTCTTAACTGCN

Query= MSMg01no537_m14.g1 MSMg01no537_m14.g1 CHROMAT_FILE:
MSMg01no537_m14.g1 PHD_FILE: MSMg01no537_m14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:15 2005
         (603 letters)



>mm_chr17_13055633_13056635
          Length = 1003

 Score = 1133 bits (586), Expect = 0.0
 Identities = 600/606 (99%), Gaps = 3/606 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   actgtggacacagcttcgtttattctctttataccccaaccttctcggagggatgttcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtggacacagcttcgtttattctctttataccccaaccttctcggagggatgttcag 260

                                                                       
Query: 61  gaacgcctccatctctcgtcagcttgtaacctccgtcctgttccttcagcaaaactcggc 120
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaacgcctccatctctagtcagcttgtaacctccgtcctgttccttcagcaaaactcggc 320

                                                                       
Query: 121 aagcaggtgcaagcagcttcccagtggggtgggtagaaacagacagagaagaaaattcga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagcaggtgcaagcagcttcccagtggggtgggtagaaacagacagagaagaaaattcga 380

                                                                       
Query: 181 agccgtgagactgaatgtgacagtgacatcagtcggtcagagtccctattcagttccatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agccgtgagactgaatgtgacagtgacatcagtcggtcagagtccctattcagttccatc 440

                                                                       
Query: 241 actgtcaacttgaaacaagtcgcttaccttggaagcctaagcttcatctctgagataggg 300
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 actgtcaacttgaaacaagtcgcttaccttggaagcctcagcttcatctctgagataggg 500

                                                                       
Query: 301 acaatgacacacccacatcatagggcccccaccccagtatgtgctgccctgcagtgagac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaatgacacacccacatcatagggcccccaccccagtatgtgctgccctgcagtgagac 560

                                                                       
Query: 361 acatggaccttggatttgacgttccattactcttcaataactcggttcatggtttttata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acatggaccttggatttgacgttccattactcttcaataactcggttcatggtttttata 620

                                                                       
Query: 421 atgccatctgtagaaagggggacttgataaaatcagcctgactggcggactacagagaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgccatctgtagaaagggggacttgataaaatcagcctgactggcggactacagagaaa 680

                                                                       
Query: 481 gcaggatgagcactgagggtgagatgccaaagcttttttttt---aagatctatttattt 537
           ||||||||||||||||||||||||||||||||||||||||||   ||||| |||||||||
Sbjct: 681 gcaggatgagcactgagggtgagatgccaaagcttttttttttttaagatttatttattt 740

                                                                       
Query: 538 attttatgtatatgagtacactgtagctgtacagatggttgtgagccatcacatggttgc 597
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 attttatgtatatgagtacactgtagctgtacagatggttgtgagccatcacatggttgc 800

                 
Query: 598 tgggaa 603
           ||||||
Sbjct: 801 tgggaa 806


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space:   588849
Effective search space used:   588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)