Query= MSMg01no542_c07.b1 MSMg01no542_c07.b1 CHROMAT_FILE:
MSMg01no542_c07.b1 PHD_FILE: MSMg01no542_c07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:04 2005
(713 letters)
>mm_chr17_77026774_77027886
Length = 1113
Score = 1317 bits (681), Expect = 0.0
Identities = 702/709 (99%)
Strand = Plus / Plus
Query: 5 gaattcatttaatttctgactcagaagctgtcaaacctaccatgaattttaactgagtga 64
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatttaatttctgaatcagaagctgtcaaacctaccatgaattttaactgagtga 264
Query: 65 aggaagtattctgatgtgggaattttaaacaccacagatctacacgtacagtgatgctac 124
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 265 aggaagtattctgatgtgggaattttaaacaccacagatctacacatgcagtgatgctac 324
Query: 125 aatagaaattagttacctggcagtaataaaaaattatgcctaaatcacgatgactgtcaa 184
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 325 aatagaaattagttacctggcagtaataaaaaattatgcctaaatcatgatgactgtcaa 384
Query: 185 atggaacattttgatgtattcaataacaatgtctattgttttagaaacctgtttaagcta 244
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 385 atggaacattttgatgtattcaataacaacgtctattgttttagaaacctgtttaagcta 444
Query: 245 gataacatctagaaaaactctttctggcttttattccatttagtttacttaacttttgat 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tataacatctagaaaaactctttctggcttttattccatttagtttacttaacttttgat 504
Query: 305 gatgctaacaagcaagtgctttcattacaagtttaaaatctgttggatttttacaaatta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gatgctaacaagcaagtgctttcattacaagtttaaaatctgttggatttttacaaatta 564
Query: 365 cacaacttttttggcaaacaattcttggaattttaatgaaaacattgcaagtattctaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cacaacttttttggcaaacaattcttggaattttaatgaaaacattgcaagtattctaaa 624
Query: 425 cacccctctgtgcctcttttatagttctctctgtcccatactaatgacttctctgcctgc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cacccctctgtgcctcttttatagttctctctgtcccatactaatgacttctctgcctgc 684
Query: 485 taattacttatatattacttaacctgtttttgtgctttctcaaaatggaacagcaaaaat 544
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ttattacttatatattacttaacctgtttttgtgctttctcaaaatggaacagcaaaaat 744
Query: 545 aatatgggcattttataacagaccatattaaattatctatgctattggtaaaagttatta 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aatatgggcattttataacagaccatattaaattatctatgctattggtaaaagttatta 804
Query: 605 atttttatcaaggaataatatttcattaattaaccaatctatgatgtatatctactatta 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 atttttatcaaggaataatatttcattaattaaccaatctatgatgtatatctactatta 864
Query: 665 ttgataatttgaggaatttcaatttggtgatagtatgaataacattgtc 713
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 ttgataatttgaggaatttcaatttggtgatagtatgaataacattgtc 913
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 713
Length of database: 1113
Length adjustment: 10
Effective length of query: 703
Effective length of database: 1103
Effective search space: 775409
Effective search space used: 775409
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no542_c07.g1 MSMg01no542_c07.g1 CHROMAT_FILE:
MSMg01no542_c07.g1 PHD_FILE: MSMg01no542_c07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:04 2005
(676 letters)
>mm_chr17_77188519_77189594
Length = 1076
Score = 890 bits (460), Expect = 0.0
Identities = 478/490 (97%), Gaps = 10/490 (2%)
Strand = Plus / Minus
Query: 1 taggttttgttggacatgatcttaaaaggagagagggactttaacctagctaccaaggta 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 480 taggttttgttggacatgatcttataaggagagagggactttaacctagctaccaaggta 421
Query: 61 catgacctcctctagtgaggcaaaggtcagacacatgtttatatgctctgagtcatgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 catgacctcctctagtgaggcaaaggtcagacacatgtttatatgctctgagtcatgcaa 361
Query: 121 gcctgagtcagtgaggaagaagtccttctcctgatggtcacagcatgcaaattctagggt 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 gcctgagtcagtgagtaagaagtccttctcctgatggtcacagcatgcaaattctagggt 301
Query: 181 taggacatgccttgataccaatcttgttccaggcctgttccctggcccatatgcatatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 taggacatgccttgataccaatcttgttccaggcctgttccctggcccatatgcatatga 241
Query: 241 acataggtagatatagttataaattatacatattgatctatgtgtgtgtgtgtgtgtgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 acataggtagatatagttataaattatacatattgatctatgtgtgtgtgtgtgtgtgtg 181
Query: 301 tgtgtgtgtgtgtgtgtgtctgtgtgtgcgtgcattacaacagttaaagaaaagatgtaa 360
||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 tgtgtgtgt----------ctgtgtgtgcgtgcattacaacagttaaagaaaagatgtaa 131
Query: 361 tgaattgaaggagggattggcatgaaagccggagataactgaagggggaaatcatataat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tgaattgaaggagggattggcatgaaagccggagataactgaagggggaaatcatataat 71
Query: 421 tatattttaatttcaaaattaaaataattcaaagcatgggaaaaattagtctaggtaaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tatattttaatttcaaaattaaaataattcaaagcatgggaaaaattagtctaggtaaac 11
Query: 481 atctcttgtc 490
||||||||||
Sbjct: 10 atctcttgtc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
