Query= MSMg01no543_b20.b1 MSMg01no543_b20.b1 CHROMAT_FILE:
MSMg01no543_b20.b1 PHD_FILE: MSMg01no543_b20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:22 2005
(693 letters)
>mm_chr17_65625694_65626786
Length = 1093
Score = 1319 bits (682), Expect = 0.0
Identities = 688/690 (99%)
Strand = Plus / Minus
Query: 4 ggaattctcatgagccctttgaatctctttagggctgagattctcacaagcctccctcca 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 ggaattctcatgagccccttgaatctctttagggctgagattctcacaagcctccctcca 834
Query: 64 catgtacagccctgaggagttagtaggccttacctcatgaatgtcccatgagaccatgtc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 catgtacagccctgaggagttagtaggccttacctcatgaatgtcccatgagaccatgtc 774
Query: 124 catggtcatgtaaaacagaggaaatagcttatgagaattaggatgtgacattcctcatag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 catggtcatgtaaaacagaggaaatagcttatgagaattaggatgtgacattcctcatag 714
Query: 184 ctattgtttctggacctcagaaatgtcagcaatgataattcttactccgtattcaaacta 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ctattgtttctggacctcagaaatgtcagcaatgataattcttactccgtattcaaacta 654
Query: 244 gggccttttcaatctccccagctccgccaggttttttctttttctcctcaacggactctt 303
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gggccttttcaatctctccagctccgccaggttttttctttttctcctcaacggactctt 594
Query: 304 attagcgataagtattctttctaggatatgccataatcactacccctcaattttcttcta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 attagcgataagtattctttctaggatatgccataatcactacccctcaattttcttcta 534
Query: 364 tttgcttttttaattactctgtatcttgtagagtctaattataaatataagagatgcaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tttgcttttttaattactctgtatcttgtagagtctaattataaatataagagatgcaat 474
Query: 424 acagggagggtgcctccattgtcttaaaaccaattggttatgcctggttttagatactgg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 acagggagggtgcctccattgtcttaaaaccaattggttatgcctggttttagatactgg 414
Query: 484 aatctgaaaagcagtttctttacttctacttaaatggctttcactttaaactatagcccc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aatctgaaaagcagtttctttacttctacttaaatggctttcactttaaactatagcccc 354
Query: 544 agtgacttcaagctcattgtattgccccacagaaagtatagcttccagttgcaactctgc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agtgacttcaagctcattgtattgccccacagaaagtatagcttccagttgcaactctgc 294
Query: 604 taagcagagtatccaagagcaaagctgtaatgaacaagagcgagaagccaagtccagcgc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 taagcagagtatccaagagcaaagctgtaatgaacaagagcgagaagccaagtccagcgc 234
Query: 664 attctactttaaaataataatttggaacca 693
||||||||||||||||||||||||||||||
Sbjct: 233 attctactttaaaataataatttggaacca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 693
Length of database: 1093
Length adjustment: 10
Effective length of query: 683
Effective length of database: 1083
Effective search space: 739689
Effective search space used: 739689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no543_b20.g1 MSMg01no543_b20.g1 CHROMAT_FILE:
MSMg01no543_b20.g1 PHD_FILE: MSMg01no543_b20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:23:22 2005
(634 letters)
>mm_chr17_65499073_65500106
Length = 1034
Score = 1158 bits (599), Expect = 0.0
Identities = 626/635 (98%), Gaps = 1/635 (0%)
Strand = Plus / Plus
Query: 1 ctagcttcaagtaaaaaggagattacaaattaccagaggctatgagatagagaaaacagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctagcttcaagtaaaaaggagattacaaattaccagaggctatgagatagagaaaacagt 260
Query: 61 aaaaagatgaaaacatatagttgtgagtgcctgcattaagaaaatcagtgttcgatcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaagatgaaaacatatagttgtgagtgcctgcattaagaaaatcagtgttcgatcttg 320
Query: 121 gctctgtgactccgcagaaagttgtctgcacaggtgagagtgtggaccacagaagctaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctctgtgactccgcagaaagttgtctgcacaggtgagagtgtggaccacagaagctaac 380
Query: 181 agcttctgagacaggtgagagccacagagcttctgaggcagcatcgtttttgggctccag 240
|||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 agcttctgggacaggtgagagccacagagcttctgaggcagcaccgtttttgggctccag 440
Query: 241 acatctgccaccttcccagccagaggaaaggggtccgcccagcccgggaggctaggattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatctgccaccttcccagccagaggaaaggggtccgcccagcccgggaggctaggattt 500
Query: 301 tgactcaggattggcgggagccaccttggttcccagactcggcagaaagcagcctgcgca 360
||||||||||| |||||||| ||||||||||||| |||| ||||||||||||||||| ||
Sbjct: 501 tgactcaggatcggcgggaggcaccttggttcccggacttggcagaaagcagcctgcaca 560
Query: 361 ggtgagagtgtgaactacagaagctaacagcttctgggacaggcgagagccacagagctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtgagagtgtgaactacagaagctaacagcttctgggacaggcgagagccacagagctt 620
Query: 421 ctgaggcagcgacgttttcaggttccagacatctagccaccttcccgggcagagcacagg 480
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgaggcagcgacgttttcgggttccagacatctagccaccttcccgggcagagcacagg 680
Query: 481 tgtccacccagctggggaggctctagcctcaggatccgcaggagccattttggttccagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtccacccagctggggaggctctagcctcaggatccgcaggagccattttggttccagg 740
Query: 541 actctgcagaaagtagtctgcacaggtgagagtatggactactgaaattaacagcttctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 actctgcagaaagtagtctgcacaggtgagagtatggactactgaaattaacagcttctg 800
Query: 601 ggacaggc-aaagcaacacagcttctgggaaaggt 634
|||||||| ||||||||||||||||||||||||||
Sbjct: 801 ggacaggccaaagcaacacagcttctgggaaaggt 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 52
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
