NNNCCCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCTTGTGAGTGCGTAATACAATCCATGTTCAAGGTGCCCT
ATTAGTTAAAAGCTGGTATATAAGAGAATTGACTTCATAAGTAAATGAAA
GAGTATAAATCTAAGAGCATAAAGCCATGCACAGTTTAGACACATAAGGA
TCAGAGAAACTGAGACAGACAAGGACTCAAATTCTGGCAGTTGCTTTAAT
TAACAGTATAAACCTGTAGTTCCTTGGTTGTCAAATGGGTAGGAATGATA
ATTCAGAAAGAAGCCTATCTTTAATTAGGTCATCAAGGTGAGGTATGTAA
GTGGGTTATTTAATGGCTGGTAAAAACTGAACACATGACAACAATTTAAA
TAATTCAGAGTGAAAAATCTGACCAATGAGAACTGAAATTACATTAAGTC
AAGTTTTCCGTAGACATATTAACCACAGGGAAATTGTCTACTGCCACCAG
AAGGAATATAGGTACAAAGTTTTCTGCTGATGCTAGTACACCTACAGTGT
AATTAAGAATAAACTCAAGTTATCCTAAGGATAAGGACATAGGAAGGGGA
AGCTTTGGGTATTAGAGAGTTACAACCTTTATTCCTAAATGCATATGAAA
ATTCACAAAGGGAACTTCCATATATCAAAATGATCATCTCTCATGCATGC
ATTTTCATAAAAGACAATGATACAGAGTTACATTACATTACTCTTCATTT
CTTA

NNGGACGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGCATCTCTTGGATACCC
TGATGAACTGTGAGCATTATTCATTGCCCAGGACATCAAAAGGGAAGAGA
CTCAGTGGCTTGAGGCAATAACCAGGTATATCAAGTGGCTCAAGAAATGG
CTAAGCAAGAGCCTATCCCGGTTATGGATCTACAAGAAATACTCGCTGGG
AAATGGGACCAGACTAAGGGATGGCCTCACTTAGAATATACTGAAGAAGA
AAGAACTCAGATTGCTAGCTACCCTATCAACTACTACTTAGAGAAAGAAG
GGCAGTGGCACACACAAGAAGGAAAAACTATACTCCCTAGAAATCAAGCA
AAAGACATACTAGGTCAAATGCACAGGGGATTAAAAAATAAATAAAAAGT
TTGTCCAAGCAGTTAAGGAATCAAAAGTACATATAATGGACCTTAGGTTT
TGGGCCAGAGAGACAGTAGAACATTGTAATGTATGCAAGCAAGTGAATGC
TTATACAGCCAAGAGTAATCAGGGCAAAACACCTAGGGGAGAATGGCCTG
GAGTTTACTGGGAAGTCAATTTTAGAGAAGTTAAGCCAGGAAAATATGGT
TACAAATACCTTCTAGTGTATGTGGATACTTTCTCTGGATGGGTTGAAGC
TTTCCCCTCCATACAGGAAACAGCCACTGTGGTAGCCAAGAAGATATCAG
GAN

Query= MSMg01no544_l01.b1 MSMg01no544_l01.b1 CHROMAT_FILE:
MSMg01no544_l01.b1 PHD_FILE: MSMg01no544_l01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:26 2005
         (595 letters)



>mm_chr17_77854269_77855263
          Length = 995

 Score =  980 bits (507), Expect = 0.0
 Identities = 572/595 (96%), Gaps = 8/595 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccttgtgagtgcg--taatacaatcca-tgttcaaggtgccctattagttaaaag 61
           |||||||||||||  |||  ||| |||||||| || |||||||||||||| |||||||||
Sbjct: 205 gaattccttgtga--gcgtttaaaacaatccattg-tcaaggtgccctatcagttaaaag 261

                                                                       
Query: 62  ctggtatataagagaattgacttcataagtaaatgaaagagtataaatctaagagcataa 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctggtatataagagaattgacttcataagtaaatgaaagagtataaatctaagagcataa 321

                                                                       
Query: 122 agccatgcacagtttagacacataaggatcagagaaactgagacagacaaggactcaaat 181
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 322 agccatgcacagtttagacacacaaggatcagagaaactgagacagacaaggactcaaat 381

                                                                       
Query: 182 tctggcagttgctttaattaacagtataaacctgtagttccttggttgtcaaatgggtag 241
           ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||
Sbjct: 382 tctggcagttgctttaattaacagtataaatatgtagttccttggttgtcaaatgggtag 441

                                                                       
Query: 242 gaatgataattcagaaagaagcctatctttaattaggtcatcaaggtgaggtatgtaagt 301
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 442 gaatgataattcagaaagaagcctatcattaattaggtcatcaaggtgaggtatgtaagt 501

                                                                       
Query: 302 gggttatttaatggctggtaaaaactgaacacatgacaacaatttaaataattcagagtg 361
           |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct: 502 gggttatttaatggctggtaaaaactgaacacataacaataatttaaataattcagagtg 561

                                                                       
Query: 362 aaaaatctgaccaatgagaactgaaattacattaagtcaagttttccgtagacatattaa 421
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aaaaatctgaccaatgagaactgaaattacattaagtcaagttttccgtagacatattaa 621

                                                                       
Query: 422 ccacagggaaattgtctactgccaccagaaggaatataggtacaaagttttctgctgatg 481
           ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 622 ccacagggaaaatgtctactgccaccagaagcaatataggtacaaagttttctgctgatg 681

                                                                       
Query: 482 ctagtacacctacagtgtaattaagaataaactcaagtta-tcctaaggataaggacata 540
           |||||| ||||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct: 682 ctagtatacctacagtgtaattaagaataaactcaagttaatc-taaggataaggccata 740

                                                                  
Query: 541 ggaaggggaagctttgggtattagagagttacaacctttattcctaaatgcatat 595
           ||||||||||||||||||||||||||||||| |  ||||||||||||||||||||
Sbjct: 741 ggaaggggaagctttgggtattagagagttatagtctttattcctaaatgcatat 795


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space:   576225
Effective search space used:   576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)