Query= MSMg01no544_n06.b1 MSMg01no544_n06.b1 CHROMAT_FILE:
MSMg01no544_n06.b1 PHD_FILE: MSMg01no544_n06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:37 2005
(634 letters)
>mm_chr17_74256155_74257190
Length = 1036
Score = 1180 bits (610), Expect = 0.0
Identities = 626/632 (99%), Gaps = 2/632 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggcaactcggatatttccttttttaccagaaggggaggataacagcatgcatt 64
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 205 gaattcaggcaactcggatatttccttttttaccagaagggcaagataacagcatgcatt 264
Query: 65 cagggtgaaaaaaaaaa--tcatctcacttggcaaggacttctaggtcagaatggtaaga 122
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagggtgaaaaaaaaaaaatcatctcacttggcaaggacttctaggtcagaatggtaaga 324
Query: 123 gtagataccaaaaatcctggcaaccaatatcatgtaccagttagtacatgtacatacacc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtagataccaaaaatcctggcaaccaatatcatgtaccagttagtacatgtacatacacc 384
Query: 183 tagtattgtattgtattgatagtgcatgtgcaatatcatatacagatagctgtatctgct 242
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 385 tagtattgtattgtattgatagtgcatgtgcaatatcatatacagacagctgtatctgct 444
Query: 243 aagttaatggtccttatggttatcacatggtcccatacttgattttaaacaatgagatat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aagttaatggtccttatggttatcacatggtcccatacttgattttaaacaatgagatat 504
Query: 303 ttgggcaggatatgccttggtatgtgctggccacatagcctcagaattataaaagtgaag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgggcaggatatgccttggtatgtgctggccacatagcctcagaattataaaagtgaag 564
Query: 363 actccctaggttctagtgcaagttctaaaatgtatctgattgatgaaatgatgctagcaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 565 actccctaggttctagtgcaagttctaaaatgtatctgattgatgaaatgacgctagcaa 624
Query: 423 gccccaccttactagttaatgttaaatggcaagttcaatgtccctggtggtgaacaggct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gccccaccttactagttaatgttaaatggcaagttcaatgtccctggtggtgaacaggct 684
Query: 483 ctgattccaagactaatactcatgtccctcttaggatctatatctagtatctacttcttc 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctgattccaagactaatactcatgtccctcttaggatctatatctagtatctacttcttc 744
Query: 543 ctgtttcctattctgcccgacctggtccactaggagttctcctgtcactgccttgagctg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctgtttcctattctgcccgacctggtccactaggagttctcctgtcactgccttgagctg 804
Query: 603 acctgggttttcatggtgttctgtgtgctcac 634
||||||||||||||||||||||||||||||||
Sbjct: 805 acctgggttttcatggtgttctgtgtgctcac 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1036
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1026
Effective search space: 640224
Effective search space used: 640224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no544_n06.g1 MSMg01no544_n06.g1 CHROMAT_FILE:
MSMg01no544_n06.g1 PHD_FILE: MSMg01no544_n06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:25:37 2005
(415 letters)
>mm_chr17_74419637_74420451
Length = 815
Score = 629 bits (325), Expect = 0.0
Identities = 343/349 (98%)
Strand = Plus / Minus
Query: 64 ggctcttacagtttttctgcctcatctgccatgattatccccgaggctctgggaggaggg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ggctcttacagtttttctgcctcatctgccatgattatccccgaggctctgggaggaggg 756
Query: 124 agcgtgatacagatgtgccacatacagctggggactccatagtctcttattgtccgatgt 183
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 agtgtgatacagatgtgccacatacagctggggactccatagtctcttattgtccgatgt 696
Query: 184 tgagctgctatgagtttctgcctattaccatctctgcagagagaagtttcgttgatgcag 243
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tgaggtgctatgagtttctgcctattaccatctctgcagagagaagtttcgttgatgcag 636
Query: 244 gttgagaaacacactgattcatgcacagattgtgcttcacctgcaggatcacacctgctg 303
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 635 tttgagaaacacactgattcgtgcacagattgtgcttcacctgcaggatcacacctgctg 576
Query: 304 taggaacacggagcagtgtggacagatgacagtgagcagtgttgaggtcactagagcctt 363
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 575 taggaacacggagcagtgtggacagatgacagtgagcagtgttgaggtcacgagagcctt 516
Query: 364 tgggagagaaatggagctaggatgggaagtgttctggtagcatctcgta 412
|||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 515 tgggagagaaatggagctaggatgggaagtgttctggtagcacctcgta 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
