Query= MSMg01no546_p08.b1 MSMg01no546_p08.b1 CHROMAT_FILE:
MSMg01no546_p08.b1 PHD_FILE: MSMg01no546_p08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:26 2005
(699 letters)
>mm_chr17_4673055_4674153
Length = 1099
Score = 1321 bits (683), Expect = 0.0
Identities = 692/695 (99%)
Strand = Plus / Plus
Query: 5 gaattcaccctccccattctgaacacccatactatttttgatgctgtactttaaaaaaaa 64
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 205 gaattcaccctccccattctgaacacccatactatttttgatgctgtacttttaaaaaaa 264
Query: 65 attaattcagacataaatgaacaaaagctgtacctgcaggaagttacattctaatgaaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attaattcagacataaatgaacaaaagctgtacctgcaggaagttacattctaatgaaac 324
Query: 125 aaggctgacctccatgacaaattgatgagggcacagtcaactctcaattattcatgtgag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaggctgacctccatgacaaattgatgagggcacagtcaactctcaattattcatgtgag 384
Query: 185 gattatccgtgacacactctgagatcacccatcacgatttctgaaatcccaggctccttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gattatccgtgacacactctgagatcacccatcacgatttctgaaatcccaggctccttg 444
Query: 245 gcttctccactatactgactggggtttggggaaaggcaatctgaaatgcatccctgtgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcttctccactatactgactggggtttggggaaaggcaatctgaaatgcatccctgtgat 504
Query: 305 atagctttagtgacagagtcaagcaagccagctagcccagacacctgtggattgccaccc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atagctttagtgacagagtcaagcaagccagctagcccagacacctgtggattgccaccc 564
Query: 365 tccttcagtaagcagatatagagcactcagggtcaggtcctctcctgagcactataaaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tccttcagtaagcagatatagagcactcagggtcaggtcctctcctgagcactataaaaa 624
Query: 425 caaatgaggtaagtgtagacagagcatgctggatgcatacagaaagcaatgcctaattct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caaatgaggtaagtgtagacagagcatgctggatgcatacagaaagcaatgcctaattct 684
Query: 485 gctaggtgaaagagacaagaaagcttaaaatgggaagatgaccactgatcattgatataa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gctaggtgaaagagacaagaaagcttaaaatgggaagatgaccactgatcattgatataa 744
Query: 545 atattcagcttgagtgggagtcaagcagcagttgaggtgagaggcatgcaatttggattg 604
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 745 atattcagcttgagtgggagtcaagcagcagttgaggtgagaggcgtgcaatttggattg 804
Query: 605 cctgatcgccttgttttccaaggtggtatacttctgcttcccttcggaagatctagacat 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 cctgatcgccttgttttccaaggtggtatacttctgcttcccttcggaagatctagacat 864
Query: 665 tatagaagatgtgtattatgagacactttctgaat 699
|||||||||||||| ||||||||||||||||||||
Sbjct: 865 tatagaagatgtgtgttatgagacactttctgaat 899
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space: 750321
Effective search space used: 750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no546_p08.g1 MSMg01no546_p08.g1 CHROMAT_FILE:
MSMg01no546_p08.g1 PHD_FILE: MSMg01no546_p08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:26 2005
(646 letters)
>mm_chr17_4836545_4837590
Length = 1046
Score = 1226 bits (634), Expect = 0.0
Identities = 643/646 (99%)
Strand = Plus / Minus
Query: 1 tctgtctctagttggtggtactggttttggaggttgtggatcttctgggggtgtggggac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 846 tctgtctctagttggtggtactggttttggaggttgtggatcttctgggggtgtggggac 787
Query: 61 ataaggttgctgggctagagggtagagctaactgtttctagccagaggcctctgcttctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ataaggttgctgggctagagggtagagctaactgtttctagccagaggcctctgcttctg 727
Query: 121 ggtaagctaccatgtgagggagctgccccatgattctacagctaagaaccgaagtcactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 ggtaagctaccatgtgagggagctgccccatgattctacagctaagaaccgaagtcactt 667
Query: 181 gcctcctgaagcaaggccatgctgtctctgctgtgaagctgtccagggctgagcactgct 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 666 gcctcctgaagcaaggccatgctgtctctgctgtgaagatgtccagggctgagcactgct 607
Query: 241 cattaacttgtttctctaaggtattatcctagtgatgagaagagtactaatattcctttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 cattaacttgtttctctaaggtattatcctagtgatgagaagagtactaatattcctttc 547
Query: 301 atacatgatacagccagtccataggcatttatcctaaaagacaattcatatccatgagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 atacatgatacagccagtccataggcatttatcctaaaagacaattcatatccatgagaa 487
Query: 361 tgtttacaaaatcagttcatggtatctttaattacagttgcctgaatatctaacaactgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tgtttacaaaatcagttcatggtatctttaattacagttgcctgaatatctaacaactgg 427
Query: 421 taaacaggtaggaaatgcatggatttacctcttaaatattataaatatgcaacatttttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 taaacaggtaggaaatgcatggatttacctcttaaatattataaatatgcaacatttttc 367
Query: 481 ccagtgtattttgaaagaacttaaaggaataacttttaaaacagagaatgctgtgactaa 540
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 366 ccagtgtattttgaaagaacttaaaggaataactttttaaacagagaatgctgtgactaa 307
Query: 541 caaagaattccctaaattcaaacaaatttcatttatgaaagtgtggagcttttctagatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 caaagaattccctaaattcaaacaaatttcatttatgaaagtgtggagcttttctagatc 247
Query: 601 tatccgatctagaattgctcaacaataaaagaacacgaagagtgta 646
|||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tatcggatctagaattgctcaacaataaaagaacacgaagagtgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
