NXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAATAAACA
TTCCTGAAAAAAGTATGATTTCCATCATAAATAAAAAAGTGTTGTCTAAC
AGGAAAATATTACTAAATACCTATATTTCCATTACCCACACAGTGAGAAA
TAGACTTATTTCCTTAATAAAATTTTTATATTTTCATATAATTGCATTTC
CTATTCTTTCAATTACTTGTACAAACCAAATATTTTGTTTATTTGTGTTT
GTTTGTTTGTTTTCTAAGCATAATCATGTTCATTGGTATAAAGAAAGTGC
AAATCCAAATGGAAATAAGTGACAGTGTTGAAGGAGACATATAAAATATG
AATATTATTCAATGTAAAGTACTCACAATGCACACTGAAGATCAACACAC
ACCACATATTGAACTTGAACTATGTATTGATTTTTTTCAATGACTCTATA
TTGCTTGCCATATTTCAAGAACCATAAAAACCCGTTGAGTATATAGAAAG
AAATAAAAGGGTATATCACATTAACCAAATTAAACATGAAAAGGAAGGGC
ATTTAAAAACATTTGGACACAGGCTGCCCTCAAGCAACAAGTCTCCAGTG
CAGTAAAAACAAAATAAAAAAGTGGGAAGTTTGCAAATTCTCTGAGAAGA
CAGGAAGTTCTGACAATCAAGTTTGTGGTTGTCAAGATAAAACCTTGGCA
CTAAAATATCCTGANCAGGAATAAAAATAAGATAACTGTAAGTTTAACAA
AGCTTCTGACATGGAAGT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXCATGAAAACACTAAATTTGAAGCCACAACCACAATACAT
ACACAGAAGATCTGGTTTGGATCTATGCAGGCCCTGTGCATAGTGCTTCA
ATATTTATGATTTCATATGAGCTTTCCTCATGTTGATTTAGAGGACTGTT
TTCTTGGTGTCTTCTATCACCTCTGGCTCTTACATTTTATTCTGTTTCCT
CTTTTTCAGAGTTACCTGAGCTCTGATAGGAGGGATTTGATGGAGATATC
CCATTTAGAGCTGATTTTCTCAAGGTCTCTCACTCTCTTCTTAATATTTG
GGCTTCATACCTATGCACATACAGGCAGCACTGATTGTATTCATTGGTTA
CAAAAAGAAGGTATGAAATTCCATAGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTATGTGTGTGTATGNATGNNNNNNNNNNNN
NNNTNNNTNTTNTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTNTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTNTTT
TTTTTTTTTTTTTGTTTTTTTTTNNTTTTTTTTTTTTT

Query= MSMg01no547_c10.b1 MSMg01no547_c10.b1 CHROMAT_FILE:
MSMg01no547_c10.b1 PHD_FILE: MSMg01no547_c10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:28:42 2005
         (656 letters)



>mm_chr17_58624674_58625728
          Length = 1055

 Score = 1139 bits (589), Expect = 0.0
 Identities = 637/653 (97%), Gaps = 3/653 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaataaacattcctgaaaaaagtatgatttcca-tcataaataaaaaagtgttgt 63
           |||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 205 gaattcaataaacattcctg-aaaaagtatgattt-cagtcataaataaaaaagtgttgt 262

                                                                       
Query: 64  ctaacaggaaaatattactaaatacctatatttccattacccacacagtgagaaatagac 123
           | ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 263 ccaacaggaaaatattactaaatacctatatttccatcacccacacagtgagaaatagac 322

                                                                       
Query: 124 ttatttccttaataaaatttttatattttcatataattgcatttcctattctttcaatta 183
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 323 ttatttccttaataagatttttatattttcatataattgcatttcctattctttcaacta 382

                                                                       
Query: 184 cttgtacaaaccaaatattttgtttatttgtgtttgtttgtttgttttctaagcataatc 243
           ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||
Sbjct: 383 cttgtacaaaccagatattttgtttatttgtgtttgtttgtttgctttctaagcatagtc 442

                                                                       
Query: 244 atgttcattggtataaagaaagtgcaaatccaaatggaaataagtgacagtgttgaagga 303
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atgttcattggtataaaggaagtgcaaatccaaatggaaataagtgacagtgttgaagga 502

                                                                       
Query: 304 gacatataaaatatgaatattattcaatgtaaagtactcacaatgcacactgaagatcaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gacatataaaatatgaatattattcaatgtaaagtactcacaatgcacactgaagatcaa 562

                                                                       
Query: 364 cacacaccacatattgaacttgaactatgtattgatttttttcaatgactctatattgct 423
           || ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 563 catacaccacatattgaacttgaactatgtattgatttttttcaatgactatatattgct 622

                                                                       
Query: 424 tgccatatttcaagaaccataaaaacccgttgagtatatagaaagaaataaaagggtata 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 tgccatatttcaagaaccataaaaacccgttgagtatatagaaagaaataaaagggtata 682

                                                                       
Query: 484 tcacattaaccaaattaaacatgaaaaggaagggcatttaaaaacatttggacacaggct 543
           |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 683 tcacattaactaaattaaacatgaaaaggaagggcatttaaaaacatatggacacaggct 742

                                                                       
Query: 544 gccctcaagcaacaagtctccagtgcagtaaaaacaaaataaaaaagtgggaagtttgca 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gccctcaagcaacaagtctccagtgcagtaaaaacaaaataaaaaagtgggaagtttgca 802

                                                                
Query: 604 aattctctgagaagacaggaagttctgacaatcaagtttgtggttgtcaagat 656
           |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 aattctttgagaagacaggaagttctgacaatcaagtttgtggttgtcaagat 855


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1055
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1045
Effective search space:   675070
Effective search space used:   675070
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)