BAC Information

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BAC

Clone NameB6Ng01-002G22
Chromosome18 (Build37)
Map Location 18,316,426 - 18,316,958
singlet/doubletsinglet
Overlap genenone
Upstream gene4921533I20Rik, LOC100040647
Downstream geneLOC100040658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002G22.bB6Ng01-002G22.g
ACCDH840458DH840459
length9451,198
definitionDH840458|Mus musculus domesticus DNA, BAC clone: B6Ng01-002G22, 5' end.DH840459|Mus musculus domesticus DNA, BAC clone: B6Ng01-002G22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaaattgaatagtgtaacaaaccagatgaagaagaaatcaaag
caggttaatgaacacagagaccttagcaatcttaaagacagtcttttgga
tacacttcattttaatatttaacataaataagtaaaaatagataatctat
gaaaatgtataattcaatgaaactgtcattttctaaatattttataacta
caaatatacaaaatgaagaaattgtatcaaaaaataaaagaaggcagaaa
aataaacttttgacttcattaaactataaaaagactagagtgcaatatat
agtaaaacaatttaaagtaaatatcttttgactaagagattctatatcct
gaaaattcagatttttatatgttcatttaatatttatcatttttagctaa
gcactggaaaaattctcagactgaaaacaaaagatcggtttattggtatt
atttgtattattgacaacaatgcaagctcacaaaaaacaggaaatactag
tatcagtaaatatgtagtcaattataaaaatgttgtatttgtatattctt
ctcatttcctctcctaaaatattttattttatttttaaaaatttttatta
gatattttctttatttacatttcaaatgctatcccaaaagtcccctatac
cctccccctgccctgcttccctatccaaccactcccacttcttggccctg
atgtccccctatactgggaacatcaagtctgcaagaccaagggccctctc
ttcctaatgatgcctgactacatcatcttctgctacatatgcagctagag
atatgagctctgggggtactggtaagtacatattgttgttcctcctatag
ggatgcagactccttcagctccttgggtactatctctagctccaccattg
ggggccatgttttctatccatagatgattgtgagcatctacttct
gaattcttatcctagaaaatagacttatagagatgagataaattttaatg
aagcattaaaatttgcaccgtcatgcattcatatgtataaattggctgcc
aaacttcgtaacagtaaagtgatgtttctggtattaatttttaagataat
aaattgtttaaaattgggttttgctcaccaaaagttataaatagattcta
acttgcataaaaaggcttaataattatggttaaaattgccaatgttccat
tgactgcagcttgtaagtttgattgcaaatttaagatctttaattcacct
atatattgtaattaggataattgcaagattaatcatcttatgagagtgct
aatacagctctctgaggccatacagccatacaaagctcagagcagcctca
acagggcttgtgtggttttcttttgttttgcaaacagtgcctagggaagt
tcttgcctgccttcagaggaatttctttttagctaaaagagcattgttgc
agatctatccagatgttgttctaaataaagtttaaattcagaatttataa
aagatctatcaggctgtagaatttatcaagacattacaatctggcttacc
tacgtcatataaagttattatacatttaaaagtttgttttttcttttgca
tcctgataattgtaaagggtttgcttctagtgaactggtgattacaggaa
aattttgcctctaagtatggctaatatagctttacattatgttagaaaaa
tttttattgtctctgctttaatacaagaagctaagagtttgaatctctca
gtgtggaaagtattttattagctaatgcctttaaagggaagcttacttca
aatctttgctctcacacaacgagctttaaagttctggggagtagctgttg
ctccagaaaagattcagaggcatatctttataatatttaaagttttagtt
atactagaaaattgaggcaaagaaatctaagaaagaaaatatatttgctt
catttttttttctttttttccatttttattagtatttagctcattacatt
tcatgctatacagaaagtccccaataccacccacctcggttcctaaccat
ccaccatctcgtttgctgcgttcctaactgggccatagtgcgtgtatact
ctcttccagaaggccgcacaagcgccactcattaactacatggcagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_18316426_18316958
seq2: B6Ng01-002G22.b_43_575 (reverse)

seq1  ACATTTTTATAATTGACTACATATTTACTGATACTAGTATTTCCTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTTATAATTGACTACATATTTACTGATACTAGTATTTCCTGTTTT  50

seq1  TTGTGAGCTTGCATTGTTGTCAATAATACAAATAATACCAATAAACCGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGCTTGCATTGTTGTCAATAATACAAATAATACCAATAAACCGAT  100

seq1  CTTTTGTTTTCAGTCTGAGAATTTTTCCAGTGCTTAGCTAAAAATGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTTTCAGTCTGAGAATTTTTCCAGTGCTTAGCTAAAAATGATAA  150

seq1  ATATTAAATGAACATATAAAAATCTGAATTTTCAGGATATAGAATCTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAATGAACATATAAAAATCTGAATTTTCAGGATATAGAATCTCTT  200

seq1  AGTCAAAAGATATTTACTTTAAATTGTTTTACTATATATTGCACTCTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAAAGATATTTACTTTAAATTGTTTTACTATATATTGCACTCTAGT  250

seq1  CTTTTTATAGTTTAATGAAGTCAAAAGTTTATTTTTCTGCCTTCTTTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTATAGTTTAATGAAGTCAAAAGTTTATTTTTCTGCCTTCTTTTAT  300

seq1  TTTTTGATACAATTTCTTCATTTTGTATATTTGTAGTTATAAAATATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGATACAATTTCTTCATTTTGTATATTTGTAGTTATAAAATATTTA  350

seq1  GAAAATGACAGTTTCATTGAATTATACATTTTCATAGATTATCTATTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGACAGTTTCATTGAATTATACATTTTCATAGATTATCTATTTTT  400

seq1  ACTTATTTATGTTAAATATTAAAATGAAGTGTATCCAAAAGACTGTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTTATGTTAAATATTAAAATGAAGTGTATCCAAAAGACTGTCTTT  450

seq1  AAGATTGCTAAGGTCTCTGTGTTCATTAACCTGCTTTGATTTCTTCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGCTAAGGTCTCTGTGTTCATTAACCTGCTTTGATTTCTTCTTCA  500

seq1  TCTGGTTTGTTACACTATTCAATTTTAGAATTC  533
      |||||||||||||||||||||||||||||||||
seq2  TCTGGTTTGTTACACTATTCAATTTTAGAATTC  533