BAC Information

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BAC

Clone NameB6Ng01-004A18
Chromosome18 (Build37)
Map Location 3,328,479 - 3,490,446
singlet/doubletdoublet
Overlap geneEG621440, Cul2, EG621501
Upstream geneLOC664794, Crem
Downstream geneBambi, LOC100039273, LOC435549, EG664867, LOC621666, Lyzl1, LOC383374, LOC664909, Map3k8, Papd1, EG664931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-004A18.bB6Ng01-004A18.g
ACCDH841566DH841567
length7571,072
definitionDH841566|Mus musculus domesticus DNA, BAC clone: B6Ng01-004A18, 5' end.DH841567|Mus musculus domesticus DNA, BAC clone: B6Ng01-004A18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(3,328,479 - 3,329,237)(3,489,409 - 3,490,446)
sequence
gaattcagggattagccatggacacactgctcccagaactccctcctaag
tgggccacaatttaaaactgcagacaaacaaacaagcttaccacacattg
gcacaccttcaatccctgaactcatgatgttgacttaggggaatcaggag
tcatccttggtcacccctggctacccatggagttcaaggccagcttgagc
tataagataccctgcattaaaagaagggaaggaggtagggtgcctttaat
tccagcacttggaaggctcaggcaggcagatctgtcactggaggcctatc
tggtctacaaagttccaggacagccagggctacacagagaaaccctattt
caaaaagaaaaaagaaagaaagaaagaaagaaagaaaaggaaaggaaagg
aaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaagg
aaaggaaaggaaaggaaaggagggggggctggtgagatggctcagtggtt
aagagcactgactgctcttccaaaagtcctgagttaaaatctcagcaacc
acatggtggctcacagccattcataaggaaatctgacgccctctttctgg
attgtctgaagacagctacagtgtacttacatataataaataaataaatt
ttaaagaacaaaaaaaaaaaaaaaagaggagggaagggagatggctcatc
agttaagctctccctataggatcttaggctggtttcctgcacctacacag
tggctaa

gaattccaagtagtctgctacaaggtctttctagggcgttggaaccctgg
cgaagactgactgtacgaatttaaaaggcactttattatgaataacagtg
atggagagtacattgattttcctccacattcttggatgacaggcagggaa
caaggaggagggggtgatgagcagctcagtagtacaaggccaattggctt
tttagagtgggaggctgtgaagggcttgcccttctaatggtacggtctcc
aacctctctgccagcagttcaggaaagctaagcttcttttgtacaacttc
attacactggatgggataagggctaagtgttaacataacacctttgtttc
taatccttgcagggactccaagacctagtccagagactctcatactttat
ctgcagagattattagagcagttaatggccctcatccctagagtttctga
tttggctggtctggaagaccatcttcaaacttgcattttgagtaagtttc
caggggctgctgctgaggggagaccacacttgggcatagacctatgtaga
ggcaaccaagagagaggttgtagacaagccaaactaactgtaacaggcag
acatctgatcctatccctgatgacaagctcttcatccaaagacctctcaa
aattctccatcagttagattccacagctgagacaaaatacctaggaaaca
attttaaggaggaaaagttttctttgggctcatagtgccagagcctttgg
ttcacagtcttcagctttgctgcccttgggccaagggtaaagctagctat
cacaatgaaagcttagggtagaatacagctgtcatgtcataagtagccag
gaagcgagcagacaagagggtcctagctagtgatagcctctttaaaagca
tgtctcactaacctaaatttcttccagctgtctcctaatgcatccctacc
tgaatctatcatcttcctgaatatctaccacatcctaatagtgacaccag
ctgaagacctagtcttcaatacagtgtgaagcatgcagaaagcacataac
acccattgagtgaccatatgcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_3328479_3329237
seq2: B6Ng01-004A18.b_47_803

seq1  GAATTCAGGGATTAGCCATGGACACACTGCTCCCAGAACTCCCTCCTAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGATTAGCCATGGACACACTGCTCCCAGAACTCCCTCCTAAG  50

seq1  TGGGCCACAATTTAAAACTGCAGACAAACAAACAAGCTTACCACACATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCACAATTTAAAACTGCAGACAAACAAACAAGCTTACCACACATTG  100

seq1  GCACACCTTCAATCCCTGAACTCATGATGTTGACTTAGGGGAATCAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACACCTTCAATCCCTGAACTCATGATGTTGACTTAGGGGAATCAGGAG  150

seq1  TCATCCTTGGTCACCCCTGGCTACCCATGGAGTTCAAGGCCAGCTTGAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTTGGTCACCCCTGGCTACCCATGGAGTTCAAGGCCAGCTTGAGC  200

seq1  TATAAGATACCCTGCATTAAAAGAAGGGAAGGAGGTAGGGTGCCTTTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGATACCCTGCATTAAAAGAAGGGAAGGAGGTAGGGTGCCTTTAAT  250

seq1  TCCAGCACTTGGAAGGCTCAGGCAGGCAGATCTGTCACTGGAGGCCTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCACTTGGAAGGCTCAGGCAGGCAGATCTGTCACTGGAGGCCTATC  300

seq1  TGGTCTACAAAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTACAAAGTTCCAGGACAGCCAGGGCTACACAGAGAAACCCTATTT  350

seq1  CAAAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAAGGAAAGGAAAGG  400
      |||||||||||||||||||||||||||||||||||     ||||||||||
seq2  CAAAAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGA-----AAAGGAAAGG  395

seq1  AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG  445

seq1  AAAGGAAAGGAAAGGAAAGGAAAGGAGGGGGGGCTGGTGAGATGGCTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAGGAAAGGAAAGGAAAGGAGGGGGGGCTGGTGAGATGGCTCAG  495

seq1  TGGTTAAGAGCACTGACTGCTCTTCCAAAAGTCCTGAGTTAAAATCTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAAGAGCACTGACTGCTCTTCCAAAAGTCCTGAGTTAAAATCTCAG  545

seq1  CAACCACATGGTGGCTCACAGCCATTCATAAGGAAATCTGACGCCCTC-T  599
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CAACCACATGGTGGCTCACAGCCATTCATAAGGAAATCTGACGCCCTCTT  595

seq1  TCTGGATTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATTGTCTGAAGACAGCTACAGTGTACTTACATATAATAAATAAAT  645

seq1  AAA-TTTAAAGAACAAAAAAAAAAAAAAAAGAGGAGGGAAGGGAGATGGC  698
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTAAAGAACAAAAAAAAAAAAAAAAGAGGAGGGAAGGGAGATGGC  695

seq1  TCATCAGTTAAGCTCT-CCTAAAGGA-CCTAGGCTTGGTTTCCAGCACCT  746
      |||||||||||||||| |||| |||| | ||||| |||||||| ||||||
seq2  TCATCAGTTAAGCTCTCCCTATAGGATCTTAGGC-TGGTTTCCTGCACCT  744

seq1  ACACAGTGGCTAA  759
      |||||||||||||
seq2  ACACAGTGGCTAA  757


seq1: chr18_3489409_3490446
seq2: B6Ng01-004A18.g_99_1135 (reverse)

seq1  GGCATATGGTCTACTTCAT-GGTGTTATGTGCTGTCTGCCATGCCTTCAC  49
      ||||||||||| |||  || ||||||||||||| |||| |||| ||||||
seq2  GGCATATGGTC-ACTCAATGGGTGTTATGTGCTTTCTG-CATG-CTTCAC  47

seq1  ACTTGTATTGAAGACTAGGTCTTCAGCCTGTGTCACTATTAGGATGTGGT  99
      || ||||||||||||||||||||||||  |||||||||||||||||||||
seq2  AC-TGTATTGAAGACTAGGTCTTCAGCTGGTGTCACTATTAGGATGTGGT  96

seq1  AGAATATTCAGG-AGATGATAGATTCAGGTAGGGATGCATTAGGAGACAG  148
      || ||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AG-ATATTCAGGAAGATGATAGATTCAGGTAGGGATGCATTAGGAGACAG  145

seq1  CTGGAAGAAA-TTAGGTTAGTGAGACATGCTTTTAAAGAGGCTATCACTA  197
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAAATTTAGGTTAGTGAGACATGCTTTTAAAGAGGCTATCACTA  195

seq1  GCTAGGACCCTCTTGTCTGCTCGCTTCCTGGCTAC-TATGACATGAACAG  246
      ||||||||||||||||||||||||||||||||||| ||||||||| ||||
seq2  GCTAGGACCCTCTTGTCTGCTCGCTTCCTGGCTACTTATGACATG-ACAG  244

seq1  CTGTATTCTACCCTAAGCTTTCATTGTGATAGCTAGCTTTACCCTTGGCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTCTACCCTAAGCTTTCATTGTGATAGCTAGCTTTACCCTTGGCC  294

seq1  CAAGGGCAGCAAAGCTGAAGACTGTGAACCAAAGGCTCTGGCACTATGAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGCAGCAAAGCTGAAGACTGTGAACCAAAGGCTCTGGCACTATGAG  344

seq1  CCC-AAGAAAACTTTTCCTCCTTAAAATTGTTTCCTAGGTATTTTGTCTC  395
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGAAAACTTTTCCTCCTTAAAATTGTTTCCTAGGTATTTTGTCTC  394

seq1  AGCTGTGGAATCTAACTGATGGAGAATTTTGAGAGGTCTTTGGATGAAGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGGAATCTAACTGATGGAGAATTTTGAGAGGTCTTTGGATGAAGA  444

seq1  GCTTGTCATCAGGGATAGGATCAGATGTCTGCCTGTTACAGTTAGTTTGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTCATCAGGGATAGGATCAGATGTCTGCCTGTTACAGTTAGTTTGG  494

seq1  CTTGTCTACAACCTCTCTCTTGGTTGCCTCTACATAGGTCTATGCCCAAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTACAACCTCTCTCTTGGTTGCCTCTACATAGGTCTATGCCCAAG  544

seq1  TGTGGTCTCCCCTCAGCAGCAGCCCCTGGAAACTTACTCAAAATGCAAGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTCTCCCCTCAGCAGCAGCCCCTGGAAACTTACTCAAAATGCAAGT  594

seq1  TTGAAGATGGTCTTCCAGACCAGCCAAATCAGAAACTCTAGGGATGAGGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGATGGTCTTCCAGACCAGCCAAATCAGAAACTCTAGGGATGAGGG  644

seq1  CCATTAACTGCTCTAATAATCTCTGCAGATAAAGTATGAGAGTCTCTGGA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAACTGCTCTAATAATCTCTGCAGATAAAGTATGAGAGTCTCTGGA  694

seq1  CTAGGTCTTGGAGTCCCTGCAAGGATTAGAAACAAAGGTGTTATGTTAAC  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTCTTGGAGTCCCTGCAAGGATTAGAAACAAAGGTGTTATGTTAAC  744

seq1  ACTTAGCCCTTATCCCATCCAGTGTAATGAAGTTGTACAAAAGAAGCTTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGCCCTTATCCCATCCAGTGTAATGAAGTTGTACAAAAGAAGCTTA  794

seq1  GCTTTCCTGAACTGCTGGCAGAGAGGTTGGAGACCGTACCATTAGAAGGG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCCTGAACTGCTGGCAGAGAGGTTGGAGACCGTACCATTAGAAGGG  844

seq1  CAAGCCCTTCACAGCCTCCCACTCTAAAAAGCCAATTGGCCTTGTACTAC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCCTTCACAGCCTCCCACTCTAAAAAGCCAATTGGCCTTGTACTAC  894

seq1  TGAGCTGCTCATCACCCCCTCCTCCTTGTTCCCTGCCTGTCATCCAAGAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGCTCATCACCCCCTCCTCCTTGTTCCCTGCCTGTCATCCAAGAA  944

seq1  TGTGGAGGAAAATCAATGTACTCTCCATCACTGTTATTCATAATAAAGTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGGAAAATCAATGTACTCTCCATCACTGTTATTCATAATAAAGTG  994

seq1  CCTTTTAAATTCGTACAGTCAGTCTTCGCCAGGGTTCCAACGC  1038
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAAATTCGTACAGTCAGTCTTCGCCAGGGTTCCAACGC  1037


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