BAC Information

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BAC

Clone NameB6Ng01-006B02
Chromosome18 (Build37)
Map Location 65,040,205 - 65,086,808
singlet/doubletdoublet
Overlap genenone
Upstream geneWdr7, LOC629436, LOC667773, St8sia3, LOC433193, Onecut2, LOC667783, LOC100043304, Fech, Nars, Atp8b1, LOC629480
Downstream geneNedd4l, Alpk2, LOC667816, Malt1, LOC638570, LOC100042820, Zfp532, 5330437I02Rik, Sec11c, Grp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-006B02.bB6Ng01-006B02.g
ACCDH843029DH843030
length896603
definitionDH843029|Mus musculus domesticus DNA, BAC clone: B6Ng01-006B02, 5' end.DH843030|Mus musculus domesticus DNA, BAC clone: B6Ng01-006B02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,040,205 - 65,041,100)(65,086,206 - 65,086,808)
sequence
gaattcatttgaaatttagcaaagataaggagctggagtatgtgaaggta
gctgagagacggggaagggaaccgacagatgcaattagctgagttccaga
agaacagaaccaagggaatgagcaagaggtctaaatgaagacataagagc
caagcgttctctgggggttatgaaagatttaaatccacggaaatgtaaag
ggtatgaggcaaagaaaagccaagtcccaggtgtagaaataatagagagt
ttggaacaccgagatcctgaaagtagatacggcaacatagttagaccaag
agctgagcatttcatcttcaacaaccggagcttgacttgagagtcgtagc
tccaacctgctgagactgaggcacattccacaaaggcttggcatcttgca
tcatctcatcctctgtcaaggaagggctaagggtagatgttttcagatga
atgaagctcggggtttaatctctcttgactctttacaaagtaatttagaa
ggacaaacttctggaaaagatgaccctagaggaacatataaaatgcaata
aggagcctaaacgcagaaaagcactggcaactgtattggcaaagctttca
acattgtgtaataatagcatccgatgctgtagttagagagggtgggtcag
tgaggaggagggaagcagggctggggggtgtagctctcttgccttttctc
ttggtgtggctccaggtttaattattcaccatcacaaaatgtaattcaga
atgaaacttaatggtaatgccgtataaggaatttttaaatattaaacaaa
gcacacccaacaacagtgttctacctagacatgggtggctcatggcattt
gatccatcactcatgggcaatggagggatctctgtgagttctgggg
gaattccaacaccacccacagtcgtgagaagccatctccttcccctttcc
caccagtgcctgaaattgccttccatacctgttcacttcccagttccctc
accattctagactgctagaatcccaagctgtctgacgatcaagagaggaa
ggagcaagattccagctgcaataaagcagaggttgagggtgtatgaatga
gaggagtctcgtacataggatctgtgtgcataataaggaagagcaagcca
ggtgcaggggtggggtgcatgcgcaagggtgagccagccatgcacagaga
gatgcacgatgctagtaacttcagtgccgggctagccactgtccacactg
ttctagatgtgtccaacctatggcccaaaggctaaacgcatctcaaagta
gctattcatgttgataaacacatgacatttacatttatagatgtcatgtg
tttgtgttggctgaagagaactggtgcacaggcaggtgaaaatggtcaca
acttccaggagaaaagggccattgcttcaggccatcaaattcctagaaca
gagagcaaaggacctccagagtaaacggaggcttcactgggggtgggggg
ggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_65040205_65041100
seq2: B6Ng01-006B02.b_42_937

seq1  GAATTCATTTGAAATTTAGCAAAGATAAGGAGCTGGAGTATGTGAAGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGAAATTTAGCAAAGATAAGGAGCTGGAGTATGTGAAGGTA  50

seq1  GCTGAGAGACGGGGAAGGGAACCGACAGATGCAATTAGCTGAGTTCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGAGACGGGGAAGGGAACCGACAGATGCAATTAGCTGAGTTCCAGA  100

seq1  AGAACAGAACCAAGGGAATGAGCAAGAGGTCTAAATGAAGACATAAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGAACCAAGGGAATGAGCAAGAGGTCTAAATGAAGACATAAGAGC  150

seq1  CAAGCGTTCTCTGGGGGTTATGAAAGATTTAAATCCACGGAAATGTAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCGTTCTCTGGGGGTTATGAAAGATTTAAATCCACGGAAATGTAAAG  200

seq1  GGTATGAGGCAAAGAAAAGCCAAGTCCCAGGTGTAGAAATAATAGAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGAGGCAAAGAAAAGCCAAGTCCCAGGTGTAGAAATAATAGAGAGT  250

seq1  TTGGAACACCGAGATCCTGAAAGTAGATACGGCAACATAGTTAGACCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACACCGAGATCCTGAAAGTAGATACGGCAACATAGTTAGACCAAG  300

seq1  AGCTGAGCATTTCATCTTCAACAACCGGAGCTTGACTTGAGAGTCGTAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGCATTTCATCTTCAACAACCGGAGCTTGACTTGAGAGTCGTAGC  350

seq1  TCCAACCTGCTGAGACTGAGGCACATTCCACAAAGGCTTGGCATCTTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACCTGCTGAGACTGAGGCACATTCCACAAAGGCTTGGCATCTTGCA  400

seq1  TCATCTCATCCTCTGTCAAGGAAGGGCTAAGGGTAGATGTTTTCAGATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCATCCTCTGTCAAGGAAGGGCTAAGGGTAGATGTTTTCAGATGA  450

seq1  ATGAAGCTCGGGGTTTAATCTCTCTTGACTCTTTACAAAGTAATTTAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCTCGGGGTTTAATCTCTCTTGACTCTTTACAAAGTAATTTAGAA  500

seq1  GGACAAACTTCTGGAAAAGATGACCCTAGAGGAACATATAAAATGCAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAACTTCTGGAAAAGATGACCCTAGAGGAACATATAAAATGCAATA  550

seq1  AGGAGCCTAAACGCAGAAAAGCACTGGCAACTGTATTGGCAAAGCTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCTAAACGCAGAAAAGCACTGGCAACTGTATTGGCAAAGCTTTCA  600

seq1  ACATTGTGTAATAATAGCATCCGATGCTGTAGTTAGAGAGGGTGGGTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTGTAATAATAGCATCCGATGCTGTAGTTAGAGAGGGTGGGTCAG  650

seq1  TGAGGAGGAGGGAAGCAGGGCTGGGGGGTGTAGCTCTCTTGCC-TTTCTC  699
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGAGGAGGAGGGAAGCAGGGCTGGGGGGTGTAGCTCTCTTGCCTTTTCTC  700

seq1  TT-GTGTGGCTCCAGGTTTAATTATTCACCATCAC-AAATGTAATTCAGA  747
      || |||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTGGTGTGGCTCCAGGTTTAATTATTCACCATCACAAAATGTAATTCAGA  750

seq1  ATGAAACTTAATGGTAATGCCGTATAAGGAATTTTTTAAAAATTAAAACA  797
      ||||||||||||||||||||||||||||||| |||||||| ||| |||||
seq2  ATGAAACTTAATGGTAATGCCGTATAAGGAA-TTTTTAAATATT-AAACA  798

seq1  AAGCACAACCCAACAACAGTGTTCTACCTAGACAT-GGTGGCACAT-GCA  845
      |||||| |||||||||||||||||||||||||||| |||||| ||| |||
seq2  AAGCAC-ACCCAACAACAGTGTTCTACCTAGACATGGGTGGCTCATGGCA  847

seq1  TTTGATCCCAGCACTCAGGGGCAATGGCAGGGATCTCTGTGAGTTCAGGG  895
      |||||| ||| |||||| ||||||||| |||||||||||||||||| |||
seq2  TTTGAT-CCATCACTCATGGGCAATGG-AGGGATCTCTGTGAGTTCTGGG  895

seq1  G  896
      |
seq2  G  896

seq1: chr18_65086206_65086808
seq2: B6Ng01-006B02.g_65_667 (reverse)

seq1  CCCCCCCCCACCCCCAGTGAAGCCTCCGTTTACTCTGGAGGTCCTTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCACCCCCAGTGAAGCCTCCGTTTACTCTGGAGGTCCTTTGCT  50

seq1  CTCTGTTCTAGGAATTTGATGGCCTGAAGCAATGGCCCTTTTCTCCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTCTAGGAATTTGATGGCCTGAAGCAATGGCCCTTTTCTCCTGGA  100

seq1  AGTTGTGACCATTTTCACCTGCCTGTGCACCAGTTCTCTTCAGCCAACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGACCATTTTCACCTGCCTGTGCACCAGTTCTCTTCAGCCAACAC  150

seq1  AAACACATGACATCTATAAATGTAAATGTCATGTGTTTATCAACATGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACATGACATCTATAAATGTAAATGTCATGTGTTTATCAACATGAAT  200

seq1  AGCTACTTTGAGATGCGTTTAGCCTTTGGGCCATAGGTTGGACACATCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACTTTGAGATGCGTTTAGCCTTTGGGCCATAGGTTGGACACATCTA  250

seq1  GAACAGTGTGGACAGTGGCTAGCCCGGCACTGAAGTTACTAGCATCGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTGTGGACAGTGGCTAGCCCGGCACTGAAGTTACTAGCATCGTGC  300

seq1  ATCTCTCTGTGCATGGCTGGCTCACCCTTGCGCATGCACCCCACCCCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCTGTGCATGGCTGGCTCACCCTTGCGCATGCACCCCACCCCTGC  350

seq1  ACCTGGCTTGCTCTTCCTTATTATGCACACAGATCCTATGTACGAGACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGCTTGCTCTTCCTTATTATGCACACAGATCCTATGTACGAGACTC  400

seq1  CTCTCATTCATACACCCTCAACCTCTGCTTTATTGCAGCTGGAATCTTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATTCATACACCCTCAACCTCTGCTTTATTGCAGCTGGAATCTTGC  450

seq1  TCCTTCCTCTCTTGATCGTCAGACAGCTTGGGATTCTAGCAGTCTAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTCTCTTGATCGTCAGACAGCTTGGGATTCTAGCAGTCTAGAAT  500

seq1  GGTGAGGGAACTGGGAAGTGAACAGGTATGGAAGGCAATTTCAGGCACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGGGAACTGGGAAGTGAACAGGTATGGAAGGCAATTTCAGGCACTG  550

seq1  GTGGGAAAGGGGAAGGAGATGGCTTCTCACGACTGTGGGTGGTGTTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAAAGGGGAAGGAGATGGCTTCTCACGACTGTGGGTGGTGTTGGAA  600

seq1  TTC  603
      |||
seq2  TTC  603