BAC Information

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BAC

Clone NameB6Ng01-010G17
Chromosome18 (Build37)
Map Location 64,023,712 - 64,024,920
singlet/doubletsinglet
Overlap geneWdr7
Upstream geneApcdd1, Napg, 9430028L06Rik, 9030411M15Rik, LOC627792, Txnl1
Downstream geneLOC629436, LOC667773, St8sia3, LOC433193, Onecut2, LOC667783, LOC100043304, Fech, Nars, Atp8b1, LOC629480
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-010G17.bB6Ng01-010G17.g
ACCDH846092DH846093
length1,183229
definitionDH846092|Mus musculus domesticus DNA, BAC clone: B6Ng01-010G17, 5' end.DH846093|Mus musculus domesticus DNA, BAC clone: B6Ng01-010G17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagttgagaaaatgccattataaaaagtgtatgtgttgagaaga
acattctagattatgcacttcagaatgaatagttattttcagaaatggcc
ctgggacaccagggtgggacaagaatatgtcactgattcacacagatgga
acaccttgttaatagctctcaagtcaagtacagaaagctccaaatcttta
gaggtttattctttatactaactccttataaattttacttttttcccctt
ttaataccatgcacaatcttacgtgttcatttcagatcacatgtcagctg
ttttgaccatgaagcccctctagtgttacaaaatgactttgtaacttcta
aggccatgaaaaaaaaaaatcacatctcatttcttacatctcctataaaa
ctgtagtcctagatttttaaaaatattttatactaggaaaaattttcaat
caatattataacattacctattcccacttcacagaaaattttgtttgcaa
agacaaaagaaatatttattaaaaatattaacaagtattaaagtaggagg
aaagaaagatcaggagtcacttgctctgtttaaagggaccttaattctag
acaaagtcatatttgacagtgtgatggcctcaatctctgcagtcactgaa
acccagccttatttacgtacttagcaggcacagagagttagagcacacag
caactgccactagagtcatcttctggggcactgtctgcttttactcttta
cacagtgttctggaaataggaagcaacccgctcccctcccccacgtctca
gcaggagcgcgctccacaacaatagttcaaaggaaagctctattctgcag
tcgcgctgattgttctgtcagctgacctctgcagaagggaattgctaact
gctgccttgctccttagctgacaaatgaatgatcgcagctccatctattt
tcactatggctgcctctagcccagtgctcagacagagagccgtttgacat
cttagatcagatgattgcacaaactcctgatccaagaattgttttatacc
atttaattagtttcttcctgcttgatgacacagcctggctatggattcta
ttctatgtactgagcaggccctgaagaagcgatgaagcacctgctaagca
gactgcagatctgatcataggcaagcatgaccc
ctacatggtttgtgttggctagttttatatcaacttggtgcaagctagag
ctatattaaaggagggaatttcaattgagaaaatatctcttaagttcagt
ggtagggcttttgtgtgtgtgtgtgtgtgtgtatgtgctggggggggggg
caggcccaagcttctttaacaatttagtgaaacttcttgaaacttctttt
atgttttcgatgtaaatgtctttaggtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_64023712_64024920
seq2: B6Ng01-010G17.b_44_1226 (reverse)

seq1  GGGTCAATGCCTTGCCTATTGATCAGTATCCCTGCAGTCCCTTGCTCTAG  50
      ||||| ||| |||||||| ||||||| ||  ||||||||   |||| |||
seq2  GGGTC-ATG-CTTGCCTA-TGATCAG-AT--CTGCAGTC---TGCT-TAG  40

seq1  CAGCTGCTTCATCGGCTTCTTTCAGGGCCTGCTTCAGTACATTAGAATAG  100
      ||| ||||||||| ||||| |||||||||||| |||||||| ||||||||
seq2  CAGGTGCTTCATC-GCTTC-TTCAGGGCCTGC-TCAGTACA-TAGAATAG  86

seq1  AAATCCATAGCCAGGGCTGTGCTCATCCAAGCAGGGGAAGAAACTAAATT  150
       |||||||||||| ||||||| |||| ||||||  |||||||||| ||||
seq2  -AATCCATAGCCA-GGCTGTG-TCAT-CAAGCA--GGAAGAAACT-AATT  129

seq1  AAATGGTATAAAACAA-TCTTGGATCAGGAGTTTGTGCCAATTCATCTTG  199
      |||||||||||||||| |||||||||||||||||||||  | ||||| ||
seq2  AAATGGTATAAAACAATTCTTGGATCAGGAGTTTGTGC--AATCATC-TG  176

seq1  ATCTAAGATGTCACACCGGGCTCTCTGTCTGAGCACCTGGGCTAGAGGCA  249
      ||||||||||||| ||  ||||||||||||||||| ||||||||||||||
seq2  ATCTAAGATGTCAAAC--GGCTCTCTGTCTGAGCA-CTGGGCTAGAGGCA  223

seq1  GCCATAGTGAAAATAGATGGAGCTGCGATCATTCATTTGTCAGCTAAGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATAGTGAAAATAGATGGAGCTGCGATCATTCATTTGTCAGCTAAGGA  273

seq1  GCAAGGCAGCAGTTAGCAATTCCCTTCTGCAGAGGTCAGCTGACAGAACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGGCAGCAGTTAGCAATTCCCTTCTGCAGAGGTCAGCTGACAGAACA  323

seq1  ATCAGCGCGACTGCAGAATAGAGCTTTCCTTTGAACTATTGTTGTGGAGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCGCGACTGCAGAATAGAGCTTTCCTTTGAACTATTGTTGTGGAGC  373

seq1  GCGCTCCTGCTGAGACGTGGGGGAGGGGAGCGGGTTGCTTCCTATTTCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTCCTGCTGAGACGTGGGGGAGGGGAGCGGGTTGCTTCCTATTTCCA  423

seq1  GAACACTGTGTAAAGAGTAAAAGCAGACAGTGCCCCAGAAGATGACTCTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACTGTGTAAAGAGTAAAAGCAGACAGTGCCCCAGAAGATGACTCTA  473

seq1  GTGGCAGTTGCTGTGTGCTCTAACTCTCTGTGCCTGCTAAGTACGTAAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGTTGCTGTGTGCTCTAACTCTCTGTGCCTGCTAAGTACGTAAAT  523

seq1  AAGGCTGGGTTTCAGTGACTGCAGAGATTGAGGCCATCACACTGTCAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGGGTTTCAGTGACTGCAGAGATTGAGGCCATCACACTGTCAAAT  573

seq1  ATGACTTTGTCTAGAATTAAGGTCCCTTTAAACAGAGCAAGTGACTCCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTTGTCTAGAATTAAGGTCCCTTTAAACAGAGCAAGTGACTCCTG  623

seq1  ATCTTTCTTTCCTCCTACTTTAATACTTGTTAATATTTTTAATAAATATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTTTCCTCCTACTTTAATACTTGTTAATATTTTTAATAAATATT  673

seq1  TCTTTTGTCTTTGCAAACAAAATTTTCTGTGAAGTGGGAATAGGTAATGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTCTTTGCAAACAAAATTTTCTGTGAAGTGGGAATAGGTAATGT  723

seq1  TATAATATTGATTGAAAATTTTTCCTAGTATAAAATATTTTTAAAAATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATTGATTGAAAATTTTTCCTAGTATAAAATATTTTTAAAAATCT  773

seq1  AGGACTACAGTTTTATAGGAGATGTAAGAAATGAGATGTGATTTTTTTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTACAGTTTTATAGGAGATGTAAGAAATGAGATGTGATTTTTTTTT  823

seq1  TTCATGGCCTTAGAAGTTACAAAGTCATTTTGTAACACTAGAGGGGCTTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGGCCTTAGAAGTTACAAAGTCATTTTGTAACACTAGAGGGGCTTC  873

seq1  ATGGTCAAAACAGCTGACATGTGATCTGAAATGAACACGTAAGATTGTGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCAAAACAGCTGACATGTGATCTGAAATGAACACGTAAGATTGTGC  923

seq1  ATGGTATTAAAAGGGGAAAAAAGTAAAATTTATAAGGAGTTAGTATAAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATTAAAAGGGGAAAAAAGTAAAATTTATAAGGAGTTAGTATAAAG  973

seq1  AATAAACCTCTAAAGATTTGGAGCTTTCTGTACTTGACTTGAGAGCTATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACCTCTAAAGATTTGGAGCTTTCTGTACTTGACTTGAGAGCTATT  1023

seq1  AACAAGGTGTTCCATCTGTGTGAATCAGTGACATATTCTTGTCCCACCCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGTGTTCCATCTGTGTGAATCAGTGACATATTCTTGTCCCACCCT  1073

seq1  GGTGTCCCAGGGCCATTTCTGAAAATAACTATTCATTCTGAAGTGCATAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCCAGGGCCATTTCTGAAAATAACTATTCATTCTGAAGTGCATAA  1123

seq1  TCTAGAATGTTCTTCTCAACACATACACTTTTTATAATGGCATTTTCTCA  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAATGTTCTTCTCAACACATACACTTTTTATAATGGCATTTTCTCA  1173

seq1  ACTTGAATTC  1209
      ||||||||||
seq2  ACTTGAATTC  1183