BAC Information

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BAC

Clone NameB6Ng01-011I03
Chromosome18 (Build37)
Map Location 23,196,267 - 23,242,227
singlet/doubletdoublet
Overlap geneNol4, LOC100040579
Upstream gene4921528I01Rik, LOC546708, LOC100040547, Asxl3
Downstream geneLOC665797, Dtna, Mapre2, EG665813, LOC100040623, Zfp397, C230097I24Rik, Zfp35, Zfp191
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011I03.bB6Ng01-011I03.g
ACCDH846871DH846872
length9611,185
definitionDH846871|Mus musculus domesticus DNA, BAC clone: B6Ng01-011I03, 5' end.DH846872|Mus musculus domesticus DNA, BAC clone: B6Ng01-011I03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,196,267 - 23,197,227)(23,241,034 - 23,242,227)
sequence
gaattctctaacagccccacatttttgggggttttttatttttttatttt
tctgacgtgaaaatatgggtgtcacagcatgtgaatgctggtttgaataa
ctcacacccacgattgtcttgatgcctctacaacctttatagaatgtatg
ctatttgtaattttaattagtcttcaaagggacacatagtctaacacata
taatggctgtaatcaaatcaatacaaacatgaactattgaaccaaaacag
agcatctaaatttaacacaaaaagaacaaaaaaactgaaaaactttctag
ctagcaatgatatataataattatatatgaccatagttaaagagtacttt
aaaataggttaacattttactcagaattctaattcactttgtttaacgga
attttattttcttgtctagttcttgataatagactttatttaagtgaatc
aaagcaattccttttttgcaacacacttctggctcgtgcagatgtaaata
aaccagactctaactgatgccaacctagtctttcatccagcaagacaaac
aaacacctcaccattgtctttagcagggttctgggatacaggagaaagca
aaagcatcctttgtatctacctcctgcaaacctttcaaaaactgcatgtc
aagaagaaaaaggaaacgaaacttttctgtgttcccagttcacctttgtt
tccatattttccatataaaccaccccccaccatccatccttctagcaacc
attcccagttaatcgtgggagacccaaagctgctttccaaacctgagaga
gtcctccagatggtgcttggaagagcctttcatgcatatatctccaatat
catgcaccttagagagagcatagccttctcctccagaaaccttctttcta
acatcctcaggggctgtgcactgggaaacactcgccagtaaaagtggggg
ggggggaattg
gaattccatatattacgcacaaagtatgatcatatttaacccctatttcc
ccctccaactactacagtatctctaccaataaattcacatcctcctcatt
acactccctgcttttttataatccagtaagccccatcctaacttgggagt
tactgacaatttatgatttctggaggaggaggaataattcttctttgaga
gtactgctattggtagattcacatgctccatggatgcccacacccataca
catataggcaatattgaatttgctaattttaatcttattgctgagctgag
aatatgcatgaggctaaggtattgatactgaaaaatctacttccaaatat
atgtacatttatcatttttcttaatactagcttcttcaaagttatttaaa
acaccaacttcttcttattaagagttttgtatttggaaacaattatgtat
atgcttaggaactttttactttatactttgaaatttttatatctcatcac
atcatgattttcataattccaatttcatcatgtagtttttaaataagaat
ctctgtaaaggaatagccatgtaaaattgcattttcgttttaaccaaggt
tctgtttgaggttctttgactaggctttctcctaagacatcccggataag
tagtcggctgtgtcagtgacagatggtagctcttcttcctctccctgcat
ctgtggaatggaataatttgccatcctacatatgtagaaatggtgctgtt
tctggatactcaaagtatttatgtcttttaaaattcttgtttgttttgtt
tgtaccagtttttatattatatatgatggtcaagtacatctcattaggtg
acaatatgagggttcccataaaaacatacactacttttggaatagactat
ggtagttgttccagtgacagagcatagtcttaatgttcttttttaataag
atggaaacattttgttcctttggaagctattttttaggacaagccatgta
gataaatcttccactaaaaaaattgtgtctccatgaataataagttacag
cttttccttgaagttttgaaatacttgtgctgtctcaatgaaaccaagaa
acttgcctacacagtgtctaataaacaaaacttcaaggcagtcaattaag
cttcagaaggagtatgctgaatgtgctcttgtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_23196267_23197227
seq2: B6Ng01-011I03.b_45_1005

seq1  GAATTCTCTAACAGCCCCACATTTTTGGGGGTTTTTTATTTTTTTATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAACAGCCCCACATTTTTGGGGGTTTTTTATTTTTTTATTTT  50

seq1  TCTGACGTGAAAATATGGGTGTCACAGCATGTGAATGCTGGTTTGAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACGTGAAAATATGGGTGTCACAGCATGTGAATGCTGGTTTGAATAA  100

seq1  CTCACACCCACGATTGTCTTGATGCCTCTACAACCTTTATAGAATGTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACCCACGATTGTCTTGATGCCTCTACAACCTTTATAGAATGTATG  150

seq1  CTATTTGTAATTTTAATTAGTCTTCAAAGGGACACATAGTCTAACACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGTAATTTTAATTAGTCTTCAAAGGGACACATAGTCTAACACATA  200

seq1  TAATGGCTGTAATCAAATCAATACAAACATGAACTATTGAACCAAAACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGCTGTAATCAAATCAATACAAACATGAACTATTGAACCAAAACAG  250

seq1  AGCATCTAAATTTAACACAAAAAGAACAAAAAAACTGAAAAACTTTCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTAAATTTAACACAAAAAGAACAAAAAAACTGAAAAACTTTCTAG  300

seq1  CTAGCAATGATATATAATAATTATATATGACCATAGTTAAAGAGTACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAATGATATATAATAATTATATATGACCATAGTTAAAGAGTACTTT  350

seq1  AAAATAGGTTAACATTTTACTCAGAATTCTAATTCACTTTGTTTAACGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGGTTAACATTTTACTCAGAATTCTAATTCACTTTGTTTAACGGA  400

seq1  ATTTTATTTTCTTGTCTAGTTCTTGATAATAGACTTTATTTAAGTGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTTTCTTGTCTAGTTCTTGATAATAGACTTTATTTAAGTGAATC  450

seq1  AAAGCAATTCCTTTTTTGCAACACACTTCTGGCTCGTGCAGATGTAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATTCCTTTTTTGCAACACACTTCTGGCTCGTGCAGATGTAAATA  500

seq1  AACCAGACTCTAACTGATGCCAACCTAGTCTTTCATCCAGCAAGACAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGACTCTAACTGATGCCAACCTAGTCTTTCATCCAGCAAGACAAAC  550

seq1  AAACACCTCACCATTGTCTTTAGCAGGGTTCTGGGATACAGGAGAAAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCTCACCATTGTCTTTAGCAGGGTTCTGGGATACAGGAGAAAGCA  600

seq1  AAAGCATCCTTTGTATCTACCTCCTGCAAACCTTTCAAAAACTGCATGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATCCTTTGTATCTACCTCCTGCAAACCTTTCAAAAACTGCATGTC  650

seq1  AAGAAGAAAAAGGAAACGAAACTTTTCTGTGTTCCCAGTTCACCTTTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAAAAGGAAACGAAACTTTTCTGTGTTCCCAGTTCACCTTTGTT  700

seq1  TCCATATTTTCCATATAAACCACCCCCCACCATCCATCCTTCTAGCAACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATTTTCCATATAAACCACCCCCCACCATCCATCCTTCTAGCAACC  750

seq1  ATTCCCAGTTAATCGTGGGAGACCCAAAGCTGCTTTCCAAACCTGAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGTTAATCGTGGGAGACCCAAAGCTGCTTTCCAAACCTGAGAGA  800

seq1  GTCCTCCAGATGGTGCTTGGAAGAGCCTTTCATGCATATATCTCCAATAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCAGATGGTGCTTGGAAGAGCCTTTCATGCATATATCTCCAATAT  850

seq1  CATGCACCTTAGAGAGAGCATAGCCTTCTCCTCCAGAAACCTTCTTTCTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACCTTAGAGAGAGCATAGCCTTCTCCTCCAGAAACCTTCTTTCTA  900

seq1  ACATCCTCAGGGGGCTGTGCACTGGGAAACACTCGCCAGTAAAAGT-GGG  949
      ||||||||| |||||||||||||||||||||||||||||||||||| |||
seq2  ACATCCTCA-GGGGCTGTGCACTGGGAAACACTCGCCAGTAAAAGTGGGG  949

seq1  GGGGGGGAATTG  961
      ||||||||||||
seq2  GGGGGGGAATTG  961

seq1: chr18_23241034_23242227
seq2: B6Ng01-011I03.g_67_1251 (reverse)

seq1  AAAACAAAGTGCACATTCAGCTATCATCCTTCTTTGGAAAGCTTTAATTT  50
      ||||| ||| ||||||||||| ||  |||||||     |||| |||||| 
seq2  AAAAC-AAGAGCACATTCAGC-ATACTCCTTCT----GAAGC-TTAATTG  43

seq1  AGCTGCCCTGGATGTTTTTTTGTTTATTAG-CACTGTGTTTAGACTAG-T  98
      | ||||| || |     ||||||||||||| |||||||  ||| | || |
seq2  A-CTGCCTTGAA----GTTTTGTTTATTAGACACTGTG--TAGGCAAGTT  86

seq1  TCTTGTGTTTACATTGAGTACAGCACAAAATTATTTCAAAACT--CATGA  146
      ||||| |||| ||||||| |||||||  || ||||||||||||   | ||
seq2  TCTTG-GTTT-CATTGAG-ACAGCAC--AAGTATTTCAAAACTTCAAGGA  131

seq1  AAAGCTGTTAACTATTAATCATGGAGACACATTTTTTTTAAGTGAAGATT  196
      |||||||| |  ||||| ||||||||||||| ||||||||   ||||| |
seq2  AAAGCTGTAACTTATTATTCATGGAGACACAATTTTTTTAGTGGAAGA-T  180

seq1  TTATCTACATGGCTTTGTCTTAAAAATAGCTTTCCAAAGGA--CAAATGT  244
      |||||||||||||||   || ||||||||| ||||||||||   ||||||
seq2  TTATCTACATGGCTTGTCCTAAAAAATAGC-TTCCAAAGGAACAAAATGT  229

seq1  TT-CATC-TACTAAAAAAGAACATTAAGACTATGCTCTGTCACTGG-ACA  291
      || |||| || ||||||||||||||||||||||||||||||||||| |||
seq2  TTCCATCTTATTAAAAAAGAACATTAAGACTATGCTCTGTCACTGGAACA  279

seq1  ACTACCATAGTCTATTCC-AAAGTAGTGCTATGTTTTTATGTGGACCCTC  340
      |||||||||||||||||| ||||||||| |||||||||||| | ||||||
seq2  ACTACCATAGTCTATTCCAAAAGTAGTG-TATGTTTTTATGGGAACCCTC  328

seq1  ATATTGTCACCTAATGAGATGTACTTGACCATCATATATAATATAAAAAC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTCACCTAATGAGATGTACTTGACCATCATATATAATATAAAAAC  378

seq1  TGGTACAAAC-AAACAAACAAGAA-TTTGAAAGACATAAATACTTTGAGT  438
      |||||||||| ||||||||||||| ||| |||||||||||||||||||||
seq2  TGGTACAAACAAAACAAACAAGAATTTTAAAAGACATAAATACTTTGAGT  428

seq1  ATCCAG-AACAGCACCATTTCTACATATGTAGGATGGCAAATTATTCCAT  487
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGAAACAGCACCATTTCTACATATGTAGGATGGCAAATTATTCCAT  478

seq1  TCCACAGATGCAGGGAGAGGAAGAAGAGCTACCATCTGTCACTGACACAG  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGATGCAGGGAGAGGAAGAAGAGCTACCATCTGTCACTGACACAG  528

seq1  CCGACTACTTATCCGGGATGTCTTAGGAGAAAGCCTAGTCAAAGAACCTC  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGACTACTTATCCGGGATGTCTTAGGAGAAAGCCTAGTCAAAGAACCTC  578

seq1  AAACAGAACCTTGGTTAAAACGAAAATGCAATTTTACATGGCTATTCCTT  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAACCTTGGTTAAAACGAAAATGCAATTTTACATGGCTATTCCTT  628

seq1  TACAGAGATTCTTATTTAAAAACTACATGATGAAATTGGAATTATGAAAA  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGATTCTTATTTAAAAACTACATGATGAAATTGGAATTATGAAAA  678

seq1  TCATGATGTGATGAGATATAAAAATTTCAAAGTATAAAGTAAAAAGTTCC  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATGTGATGAGATATAAAAATTTCAAAGTATAAAGTAAAAAGTTCC  728

seq1  TAAGCATATACATAATTGTTTCCAAATACAAAACTCTTAATAAGAAGAAG  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATATACATAATTGTTTCCAAATACAAAACTCTTAATAAGAAGAAG  778

seq1  TTGGTGTTTTAAATAACTTTGAAGAAGCTAGTATTAAGAAAAATGATAAA  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTTTTAAATAACTTTGAAGAAGCTAGTATTAAGAAAAATGATAAA  828

seq1  TGTACATATATTTGGAAGTAGATTTTTCAGTATCAATACCTTAGCCTCAT  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATATATTTGGAAGTAGATTTTTCAGTATCAATACCTTAGCCTCAT  878

seq1  GCATATTCTCAGCTCAGCAATAAGATTAAAATTAGCAAATTCAATATTGC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTCTCAGCTCAGCAATAAGATTAAAATTAGCAAATTCAATATTGC  928

seq1  CTATATGTGTATGGGTGTGGGCATCCATGGAGCATGTGAATCTACCAATA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGTGTATGGGTGTGGGCATCCATGGAGCATGTGAATCTACCAATA  978

seq1  GCAGTACTCTCAAAGAAGAATTATTCCTCCTCCTCCAGAAATCATAAATT  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTACTCTCAAAGAAGAATTATTCCTCCTCCTCCAGAAATCATAAATT  1028

seq1  GTCAGTAACTCCCAAGTTAGGATGGGGCTTACTGGATTATAAAAAAGCAG  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTAACTCCCAAGTTAGGATGGGGCTTACTGGATTATAAAAAAGCAG  1078

seq1  GGAGTGTAATGAGGAGGATGTGAATTTATTGGTAGAGATACTGTAGTAGT  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGTAATGAGGAGGATGTGAATTTATTGGTAGAGATACTGTAGTAGT  1128

seq1  TGGAGGGGGAAATAGGGGTTAAATATGATCATACTTTGTGCGTAATATAT  1187
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGGGAAATAGGGGTTAAATATGATCATACTTTGTGCGTAATATAT  1178

seq1  GGAATTC  1194
      |||||||
seq2  GGAATTC  1185