BAC Information

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BAC

Clone NameB6Ng01-011L07
Chromosome18 (Build37)
Map Location 46,268,919 - 46,269,764
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC225457, LOC100042900, Kcnn2
Downstream geneTrim36, LOC100042905, Pggt1b, Ccdc112, EG225468, LOC100042916, Mospd4, LOC100042204, Fem1c, Ticam2, Eif1a, LOC100042226, Cdo1, Atg12, Ap3s1, LOC100042950, 4833403I15Rik, LOC666798, Gm949, LOC100042241, Commd10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011L07.bB6Ng01-011L07.g
ACCDH847015DH847016
length756847
definitionDH847015|Mus musculus domesticus DNA, BAC clone: B6Ng01-011L07, 5' end.DH847016|Mus musculus domesticus DNA, BAC clone: B6Ng01-011L07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaggaatctctaatggctgaaacacacttaaagaaatg
atcagcatccttagccatcaggaaaatgcaaatcaaaacagctctgagat
tttatcttatacctgtcagaatggctaagatcaaagatacaagagacatc
tcatgctggtaaagatatggagcaaggagaacatccatccattgctggtc
tgagtgcaaacttgtacagccaatttggaaatcaatttgacagtttctca
gaagactgggactagtactatcccacaacccatctataccattcatgggc
atatacccccaaaatgctctaccatatcacaaggacacttgctcaattat
gttcaattatattcctaatagccagaaactggaaacaacttagatggccc
ttaactgaagaatagacaaagaaaatatagtacatctatacaatggagta
ttacttagctgttaagacaaacaaacaaaaacaacaacatcatcatcatg
aaatttgcaagcaaatgggtggaacgaggaaaaaactatcctgactgtaa
cccagtctgaggtaatccagacacagaaagagaaacgtgggatgtacgca
cttacaagcggatcttcgctgtaaaggatctccatgctacaataaacaga
cccagtaaagctaagaaacaaggaggactcaagggaggacacatgaatct
ctctgggaaatagactagatttcaagggtagactgggggtgggtagggat
agagca
gaattcctcccccacccagtgtccatgttgtctaacttggtctttctggt
gagagatgcaatgaatagagacccgttctctgtgtggagagggtgaaggg
tatgcatgtgtgcatgtcaccagctgtcagtgtctctgtggcgggatcaa
agtgtgcactcaggcaagggctgtagagactcaggccaccacacttccca
tttcttttgtgctcatggattgttctctcacctgtaagctgtcaaggtct
ctgattctatcctcctgagtgttcacacttacggtcttttcctcatttgt
gacgggagtttattttcttccaagacttctaagcctgggactgtaacccg
tgcccttgttgtggatagcaatgcggtgacttcattaccaaaccagccat
gcatgcagacccatcactcagcatcaccgagtggccctgcctgacactta
gtcgacagccatcgcctgtggtcagagcacagcttgggcctcatttcaaa
ggtgactcatttgcagtccctgcacgtcctcctgggctagctagtgtgtt
tgtttttctgacagataacctaagccagggaaacctcggaataaatatgt
attaattctcgagtacaaaggcactgtgcgctcattatacaaattcagat
gccccagatacttgtgatggaggagtttctcacactgtcccatgcacccc
acagtagaggtctcagtagttctcagtgtgctgaaggagcagacatattg
gcctttctccattcacacagtcctaaaagttctcaacctcagcatgagaa
atgttagtgtgacacaggagaggtgaatttaggtggtgggggaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_46268919_46269764
seq2: B6Ng01-011L07.g_67_913 (reverse)

seq1  CACCT-CCCCACCACCTAAATTCACCTCTCCTGTGTCACACTAACATTTC  49
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCCCCACCACCTAAATTCACCTCTCCTGTGTCACACTAACATTTC  50

seq1  TCATGCTGAGGTTGAGAACTTTTAGGACTGTGTGAATGGAGAAAGGCCAA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTGAGGTTGAGAACTTTTAGGACTGTGTGAATGGAGAAAGGCCAA  100

seq1  TATGTCTGCTCCTTCAGCACACTGAGAACTACTGAGACCTCTACTGTGGG  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTGCTCCTTCAGCACACTGAGAACTACTGAGACCTCTACTGTGGG  150

seq1  GTGCATGGGACAGTGTGAGAAACTCCTCCATCACAAGTATCTGGGGCATC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGGGACAGTGTGAGAAACTCCTCCATCACAAGTATCTGGGGCATC  200

seq1  TGAATTTGTATAATGAGCGCACAGTGCCTTTGTACTCGAGAATTAATACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGTATAATGAGCGCACAGTGCCTTTGTACTCGAGAATTAATACA  250

seq1  TATTTATTCCGAGGTTTCCCTGGCTTAGGTTATCTGTCAGAAAAACAAAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTCCGAGGTTTCCCTGGCTTAGGTTATCTGTCAGAAAAACAAAC  300

seq1  ACACTAGCTAGCCCAGGAGGACGTGCAGGGACTGCAAATGAGTCACCTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGCTAGCCCAGGAGGACGTGCAGGGACTGCAAATGAGTCACCTTT  350

seq1  GAAATGAGGCCCAAGCTGTGCTCTGACCACAGGCGATGGCTGTCGACTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAGGCCCAAGCTGTGCTCTGACCACAGGCGATGGCTGTCGACTAA  400

seq1  GTGTCAGGCAGGGCCACTCGGTGATGCTGAGTGATGGGTCTGCATGCATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGGCAGGGCCACTCGGTGATGCTGAGTGATGGGTCTGCATGCATG  450

seq1  GCTGGTTTGGTAATGAAGTCACCGCATTGCTATCCACAACAAGGGCACGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTTGGTAATGAAGTCACCGCATTGCTATCCACAACAAGGGCACGG  500

seq1  GTTACAGTCCCAGGCTTAGAAGTCTTGGAAGAAAATAAACTCCCGTCACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGTCCCAGGCTTAGAAGTCTTGGAAGAAAATAAACTCCCGTCACA  550

seq1  AATGAGGAAAAGACCGTAAGTGTGAACACTCAGGAGGATAGAATCAGAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGAAAAGACCGTAAGTGTGAACACTCAGGAGGATAGAATCAGAGA  600

seq1  CCTTGACAGCTTACAGGTGAGAGAACAATCCATGAGCACAAAAGAAATGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGACAGCTTACAGGTGAGAGAACAATCCATGAGCACAAAAGAAATGG  650

seq1  GAAGTGTGGTGGCCTGAGTCTCTACAGCCCTTGCCTGAGTGCACACTTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTGGTGGCCTGAGTCTCTACAGCCCTTGCCTGAGTGCACACTTTG  700

seq1  ATCCCGCCACAGAGACACTGACAGCTGGTGACATGCACACATGCATACCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCGCCACAGAGACACTGACAGCTGGTGACATGCACACATGCATACCC  750

seq1  TTCACCCTCTCCACACAGAGAACGGGTCTCTATTCATTGCATCTCTCACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCTCTCCACACAGAGAACGGGTCTCTATTCATTGCATCTCTCACC  800

seq1  AGAAAGACCAAGTTAGACAACATGGACACTGGGTGGGGGAGGAATTC  846
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACCAAGTTAGACAACATGGACACTGGGTGGGGGAGGAATTC  847