BAC Information

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BAC

Clone NameB6Ng01-012K14
Chromosome18 (Build37)
Map Location 24,065,051 - 24,101,397
singlet/doubletdoublet
Overlap genenone
Upstream geneNol4, LOC100040579, LOC665797, Dtna, Mapre2
Downstream geneEG665813, LOC100040623, Zfp397, C230097I24Rik, Zfp35, Zfp191, D030070L09Rik, Galnt1, LOC665586, 2700062C07Rik, BC021395, Slc39a6, Epl2, Mocos, Fhod3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012K14.bB6Ng01-012K14.g
ACCDH847694DH847695
length1,0631,006
definitionDH847694|Mus musculus domesticus DNA, BAC clone: B6Ng01-012K14, 5' end.DH847695|Mus musculus domesticus DNA, BAC clone: B6Ng01-012K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(24,100,333 - 24,101,397)(24,065,051 - 24,066,052)
sequence
gaattctttggcaaaaatgtaagatttatatagccacagaatcagtaagt
tcaccaacttatatatatttgttggtttttgtagctgtttgattttattt
agtagttatctatgttagtaggtaaagggttagccttgaagtatacctca
tgctaatcatgtataagtgggttgaaaggtcattaaatgtgtagatgtaa
agtgatccaggttttttgagcatctcccccatccccaccctcacccccag
gtcctcttgttctttcctctctttctcctcccctccctgcccagagtgag
gatgttgctggatcattctttatgaattagcaaacataattggtagcagt
ggatccagctgttgattggttggatccaattcccatctctgctgctttga
aaacagtctgctggagccagctctttgtttaccacactttacagagacag
ggagttaaggggcctttctgaaaacggtgaaggcggagcacagccatctg
gtgacattctctggagcacgctgccacctcctggccacacatagcaggcc
tcttcagaagacgctggtagagcctatagtgtatgtagtttatcatagcc
actaacagagaacaccttgtcaacacagaaatttaaaattttttttatgc
ctacaggtgtcacacaattgtcaaaccacaaagaaaaaacgtgtaacatt
cgaaggaaacaaatcatctgcataatttctataatgaatgcagagatgat
agaaaaaaattacctcttgcacaaaactagccttggagaatttcactatg
atgttacagtgacactcttttcttaattttttattaaaaatagatttccc
ctaatataattctaattataaactaaatatatcttagattcttttcccat
gaaccctctccttttctgtctctcatcaaaaaacaaatagtcatccatct
aagggataattagtgaaataaaatatagttaagataaaaacaaaccaatc
taacagaataatataaaacaaacaacaaacagaatgaaaagaagctaaga
aaagcaccgaagc
gaattctctacagaggaatctttaatggctgagaagcacttaaatgttaa
acagccttaatcctcagggaaatgcaagtcaaactgaccctgagattcca
cttcacaccaatcagaatgactaagatcaaaaattcaagctacagtacat
tcgggtgaggatgtggagaaagagaaacactcctccattgctggtgggag
tgcaaaccggtacaaccaccggtacaatcagtctggtggttcctcagaaa
actggaaatagttctacctgaagacccagttatatcactcctaggcatat
acccagaagagacattttgggagcaaggaagaatagtgcaagagaaactc
cataaagtctacaccagtgaagactcctagtaatgggggacaaggagcca
gagtcagccatcctctgtatcctgtcaaggcctcaagtggagggaatggg
acaccaacccagccaccaaacccccgacctacagtttgtcatgtctgcct
gacgtgctgtgaccagagtctaaaataatcatcatcatcagagagaccag
agaggcttcatccagcaactgatagaagcagatacagagccccacagcca
aacattaggttgttcttggggagtcctgcagagggtaggaaaggatcgga
gaagccagagggatcgaggacaccacaagagcaaggctcacagaatcaac
tgaccaggactcaagtgggctcacagagatcatggagcctgtgtgggtct
gaccaagtcctctgcatatacattatgatcatgaagctaggtgttcttat
gggattcctaacagtggcagttggggctctctggctcttttgtctgcctt
ttggacatttttctctactaggtgcctcctccagacttgacttgagatag
atggctggtctatgtagcctgttatgctgtgtttggttatgtctggaggt
ctgctttttttctgagggtagtgaaaggggatgaatctggagtaaggggg
ttgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_24100333_24101397
seq2: B6Ng01-012K14.b_45_1107 (reverse)

seq1  GCTTCTGGTGCTTTTTCTTTGGCTCTTTTCATTCTGTTTGTTTGTTTGTT  50
      ||||| ||||| ||||||| |  ||||||||||||||||| |||||||||
seq2  GCTTC-GGTGC-TTTTCTTAGCTTCTTTTCATTCTGTTTG-TTGTTTGTT  47

seq1  TTATACTATTCTGTTAGATTGGTTTTTGTTTTTATCTT-ACTATATTTTA  99
      ||||| ||||||||||||||||  |||||||||||||| |||||||||||
seq2  TTATATTATTCTGTTAGATTGG--TTTGTTTTTATCTTAACTATATTTTA  95

seq1  TTTCACT-ATTATCCCTTAGATGGATGACTATTTGTTTTTTGATGAGAGA  148
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTAATTATCCCTTAGATGGATGACTATTTGTTTTTTGATGAGAGA  145

seq1  CAGAAAAGGAGAGGGTTCATGGGAAAGGAATCTAAGATATATTTAGTTTA  198
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAGAAAAGGAGAGGGTTCATGGGAAAAGAATCTAAGATATATTTAGTTTA  195

seq1  TAATTAGAA-TATATTAGGGGAAATCTATTTTTAATAAAAAATTTAAGAA  247
      ||||||||| |||||||||||||||||||||||||||||||||| |  ||
seq2  TAATTAGAATTATATTAGGGGAAATCTATTTTTAATAAAAAATTAAGAAA  245

seq1  AGAGTGTCACTGTAACATCATAGTGAAATTCTCCAAGGCTAGTTTTGTGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTCACTGTAACATCATAGTGAAATTCTCCAAGGCTAGTTTTGTGC  295

seq1  AAGAGGTAATTTTTTTCTATCATCTCTGCATTCATTATAGAAATTATGCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGTAATTTTTTTCTATCATCTCTGCATTCATTATAGAAATTATGCA  345

seq1  GATGATTTGTTTCCTTCGAATGTTACACGTTTTTTCTTTGTGGTTTGACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTTGTTTCCTTCGAATGTTACACGTTTTTTCTTTGTGGTTTGACA  395

seq1  ATTGTGTGACACCTGTAGGCATAAAAAAAATTTTAAATTTCTGTGTTGAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGTGACACCTGTAGGCATAAAAAAAATTTTAAATTTCTGTGTTGAC  445

seq1  AAGGTGTTCTCTGTTAGTGGCTATGATAAACTACATACACTATAGGCTCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTTCTCTGTTAGTGGCTATGATAAACTACATACACTATAGGCTCT  495

seq1  ACCAGCGTCTTCTGAAGAGGCCTGCTATGTGTGGCCAGGAGGTGGCAGCG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCGTCTTCTGAAGAGGCCTGCTATGTGTGGCCAGGAGGTGGCAGCG  545

seq1  TGCTCCAGAGAATGTCACCAGATGGCTGTGCTCCGCCTTCACCGTTTTCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCAGAGAATGTCACCAGATGGCTGTGCTCCGCCTTCACCGTTTTCA  595

seq1  GAAAGGCCCCTTAACTCCCTGTCTCTGTAAAGTGTGGTAAACAAAGAGCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGCCCCTTAACTCCCTGTCTCTGTAAAGTGTGGTAAACAAAGAGCT  645

seq1  GGCTCCAGCAGACTGTTTTCAAAGCAGCAGAGATGGGAATTGGATCCAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAGCAGACTGTTTTCAAAGCAGCAGAGATGGGAATTGGATCCAAC  695

seq1  CAATCAACAGCTGGATCCACTGCTACCAATTATGTTTGCTAATTCATAAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAACAGCTGGATCCACTGCTACCAATTATGTTTGCTAATTCATAAA  745

seq1  GAATGATCCAGCAACATCCTCACTCTGGGCAGGGAGGGGAGGAGAAAGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATCCAGCAACATCCTCACTCTGGGCAGGGAGGGGAGGAGAAAGAG  795

seq1  AGGAAAGAACAAGAGGACCTGGGGGTGAGGGTGGGGATGGGGGAGATGCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAACAAGAGGACCTGGGGGTGAGGGTGGGGATGGGGGAGATGCT  845

seq1  CAAAAAACCTGGATCACTTTACATCTACACATTTAATGACCTTTCAACCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACCTGGATCACTTTACATCTACACATTTAATGACCTTTCAACCC  895

seq1  ACTTATACATGATTAGCATGAGGTATACTTCAAGGCTAACCCTTTACCTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATACATGATTAGCATGAGGTATACTTCAAGGCTAACCCTTTACCTA  945

seq1  CTAACATAGATAACTACTAAATAAAATCAAACAGCTACAAAAACCAACAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATAGATAACTACTAAATAAAATCAAACAGCTACAAAAACCAACAA  995

seq1  ATATATATAAGTTGGTGAACTTACTGATTCTGTGGCTATATAAATCTTAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATAAGTTGGTGAACTTACTGATTCTGTGGCTATATAAATCTTAC  1045

seq1  ATTTTTGCCAAAGAATTC  1065
      ||||||||||||||||||
seq2  ATTTTTGCCAAAGAATTC  1063

seq1: chr18_24065051_24066052
seq2: B6Ng01-012K14.g_79_1070

seq1  GGAATCTTTAATGGCTGAGAAGCACTTAAATGTTAAACAGCCTTAATCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTTTAATGGCTGAGAAGCACTTAAATGTTAAACAGCCTTAATCCT  50

seq1  CAGGGAAATGCAAGTCAAACTGACCCTGAGATTCCACTTCACACCAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAATGCAAGTCAAACTGACCCTGAGATTCCACTTCACACCAATCA  100

seq1  GAATGACTAAGATCAAAAATTCAAGCTACAGTACATTCGGGTGAGGATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACTAAGATCAAAAATTCAAGCTACAGTACATTCGGGTGAGGATGT  150

seq1  GGAGAAAGAGAAACACTCCTCCATTGCTGGTGGGAGTGCAAACCGGTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGAGAAACACTCCTCCATTGCTGGTGGGAGTGCAAACCGGTACA  200

seq1  ACCACCGGTACAATCAGTCTGGTGGTTCCTCAGAAAACTGGAAATAGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCGGTACAATCAGTCTGGTGGTTCCTCAGAAAACTGGAAATAGTTC  250

seq1  TACCTGAAGACCCAGTTATATCACTCCTAGGCATATACCCAGAAGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGAAGACCCAGTTATATCACTCCTAGGCATATACCCAGAAGAGACA  300

seq1  TTTTGGGAGCAAGGAAGAATAGTGCAAGAGAAACTCCATAAAGTCTACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGAGCAAGGAAGAATAGTGCAAGAGAAACTCCATAAAGTCTACAC  350

seq1  CAGTGAAGACTCCTAGTAATGGGGGACAAGGAGCCAGAGTCAGCCATCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAAGACTCCTAGTAATGGGGGACAAGGAGCCAGAGTCAGCCATCCT  400

seq1  CTGTATCCTGTCAAGGCCTCAAGTGGAGGGAATGGGACACCAACCCAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATCCTGTCAAGGCCTCAAGTGGAGGGAATGGGACACCAACCCAGCC  450

seq1  ACCAAACCCCCGACCTACAGTTTGTCATGTCTGCCTGACGTGCTGTGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAACCCCCGACCTACAGTTTGTCATGTCTGCCTGACGTGCTGTGACC  500

seq1  AGAGTCTAAAATAATCATCATCATCAGAGAGACCAGAGAGGCTTCATCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTAAAATAATCATCATCATCAGAGAGACCAGAGAGGCTTCATCCA  550

seq1  GCAACTGATAGAAGCAGATACAGAGCCCCACAGCCAAACATTAGGTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGATAGAAGCAGATACAGAGCCCCACAGCCAAACATTAGGTTGTT  600

seq1  CTTGGGGAGTCCTGCAGAGGGTAGGAAAGGATCGGAGAAGCCAGAGGGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGAGTCCTGCAGAGGGTAGGAAAGGATCGGAGAAGCCAGAGGGAT  650

seq1  CGAGGACACCACAAGAGCAAGGCTCACAGAATCAACTGACCAGGACTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGACACCACAAGAGCAAGGCTCACAGAATCAACTGACCAGGACTCAA  700

seq1  GTGGGCTCACAGAGATCATGGAGCCTGTGTGGGTCTGACCAAGGTCCTCT  750
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTGGGCTCACAGAGATCATGGAGCCTGTGTGGGTCTGACCAA-GTCCTCT  749

seq1  GCATATACATTATGATCATGAAGCTAGGTGTTCTTATGGGATTCCTAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATACATTATGATCATGAAGCTAGGTGTTCTTATGGGATTCCTAACA  799

seq1  GTGGCAGTTGGGGCTCTCTGGCTCTTTTGTCTGCCTTTTGGACATTTTTT  850
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTGGCAGTTGGGGCTCTCTGGCTCTTTTGTCTGCCTTTTGGACA-TTTTT  848

seq1  CTCCTACTAGGTTGCCTCCTCCAGACTTGACTTGAGAATAGATGGCTGGT  900
      || |||||||| |||||||||||||||||||||||| |||||||||||||
seq2  CT-CTACTAGG-TGCCTCCTCCAGACTTGACTTGAG-ATAGATGGCTGGT  895

seq1  CTTATTGTAGCCTGTTATGCTGTGTTTGGTTTATGTCCTGGAGGGTCTGC  950
      ||   |||||||||||||||||||||||| |||||| ||||| |||||||
seq2  CT--ATGTAGCCTGTTATGCTGTGTTTGG-TTATGT-CTGGA-GGTCTGC  940

seq1  -TTTTTTCTGAGGGTAGGTGAAAGGGGATGAATCTGGAGTAAGGGGGTGG  999
       ||||||||||||||| ||||||||||||||||||||||||||||||| |
seq2  TTTTTTTCTGAGGGTA-GTGAAAGGGGATGAATCTGGAGTAAGGGGGTTG  989

seq1  GGG  1002
      |||
seq2  GGG  992