BAC Information

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BAC

Clone NameB6Ng01-012K18
Chromosome18 (Build37)
Map Location 22,382,920 - 22,514,759
singlet/doubletdoublet
Overlap geneLOC546708, LOC100040547
Upstream geneGm944, LOC665722, LOC225264, Klhl14, 4921528I01Rik
Downstream geneAsxl3, Nol4, LOC100040579, LOC665797
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012K18.bB6Ng01-012K18.g
ACCDH847702DH847703
length1,130196
definitionDH847702|Mus musculus domesticus DNA, BAC clone: B6Ng01-012K18, 5' end.DH847703|Mus musculus domesticus DNA, BAC clone: B6Ng01-012K18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,382,920 - 22,384,060)(22,514,564 - 22,514,759)
sequence
gaattcaaaggctttctgccacagcatcctgtgtaactgagatatccaca
tttcaggcccttagccttggtgaggcattccttgacagtgatacattttt
gcatatgcagcacaaccctattttagcctcatagtttttaaatgcacttc
ctagtttcaatctgtaaacatttttacagaattttatatatctttatcta
gaaatgaaatcagtccattgctccattagtgtcaagaaattcagaattat
ttaacttcatcaaataaactgagaattttccattttttatgtatgctctt
accatggtgaaataatatagtgactgttgaaataaatatagatgagaatt
tattgtgtggtatgggtgacatttatcattggaaaaataaatgttgttga
ataaataatgttgcaataaatgggcagtcatgagagaaaagtcacttcac
agctaatgtttttccagtaaaggaaagatttaaatgtataataaagaaga
ctataaacatcttagtaataggtatagaaggaaaatggcatttttttcta
tctctttatctgaggataaaaaatggacatcagggaacaacaatgcaaag
agtaatcttaaaattaaaattggaagctgggcatggtggtgggaggcaga
agcaggtgggtttctgagttcgaggccagcctggtctacaaagtgagttc
caggacagccagggctatacagagaaaccctgtctcaaaaataaataaat
aaataaataaataaataaataaataaataaataaaattggaaaatttgat
tctgtaaaaagatgcttgtacaagaaaaatccaccctgaggctgtattta
tgggttagagacaattcctcagtaggcatgctcagttttagatgtgtgta
tcatagcaggaatacaaggaataaaataccccaacctctttttttttctt
gctgttgccaatagcatacttctaagataggtctctatatatctttattc
agaatgtatagtcatagagcttcttctttaaattgtaggccaaacttagt
attagaaccttacaaaatatgtgattgggtgcaagaaccacagatactct
ctgctacccttcgatgatgcttgttgatga
aaatgtgatcaaaaccaactcggccagtagcaacttgggaaaatataaaa
acaggaaagtagaaagaagaaagtgacagtctattataaaaactacaaaa
tgcattggggatatgaaagaatttctcctatgaagaaggtgttgtaaatt
tttaccaaagaagtaaaaactgtgtgtgtgtttggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22382920_22384060
seq2: B6Ng01-012K18.b_41_1170

seq1  GAATTCAAAGGCTTTCTGCCACAGCATCCTGTGTAACTGAGATATCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGGCTTTCTGCCACAGCATCCTGTGTAACTGAGATATCCACA  50

seq1  TTTCAGGCCCTTAGCCTTGGTGAGGCATTCCTTGACAGTGATACATTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGCCCTTAGCCTTGGTGAGGCATTCCTTGACAGTGATACATTTTT  100

seq1  GCATATGCAGCACAACCCTATTTTAGCCTCATAGTTTTTAAATGCACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGCAGCACAACCCTATTTTAGCCTCATAGTTTTTAAATGCACTTC  150

seq1  CTAGTTTCAATCTGTAAACATTTTTACAGAATTTTATATATCTTTATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTCAATCTGTAAACATTTTTACAGAATTTTATATATCTTTATCTA  200

seq1  GAAATGAAATCAGTCCATTGCTCCATTAGTGTCAAGAAATTCAGAATTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAAATCAGTCCATTGCTCCATTAGTGTCAAGAAATTCAGAATTAT  250

seq1  TTAACTTCATCAAATAAACTGAGAATTTTCCATTTTTTATGTATGCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTCATCAAATAAACTGAGAATTTTCCATTTTTTATGTATGCTCTT  300

seq1  ACCATGGTGAAATAATATAGTGACTGTTGAAATAAATATAGATGAGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGTGAAATAATATAGTGACTGTTGAAATAAATATAGATGAGAATT  350

seq1  TATTGTGTGGTATGGGTGACATTTATCATTGGAAAAATAAATGTTGTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGTGGTATGGGTGACATTTATCATTGGAAAAATAAATGTTGTTGA  400

seq1  ATAAATAATGTTGCAATAAATGGGCAGTCATGAGAGAAAAGTCACTTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAATGTTGCAATAAATGGGCAGTCATGAGAGAAAAGTCACTTCAC  450

seq1  AGCTAATGTTTTTCCAGTAAAGGAAAGATTTAAATGTATAATAAAGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATGTTTTTCCAGTAAAGGAAAGATTTAAATGTATAATAAAGAAGA  500

seq1  CTATAAACATCTTAGTAATAGGTATAGAAGGAAAATGGCATTTTTTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAACATCTTAGTAATAGGTATAGAAGGAAAATGGCATTTTTTTCTA  550

seq1  TCTCTTTATCTGAGGATAAAAAATGGACATCAGGGAACAACAATGCAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTATCTGAGGATAAAAAATGGACATCAGGGAACAACAATGCAAAG  600

seq1  AGTAATCTTAAAATTAAAATTGGAAGCTGGGCATGGTGGTGGGAGGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATCTTAAAATTAAAATTGGAAGCTGGGCATGGTGGTGGGAGGCAGA  650

seq1  AGCAGGTGGGTTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTGGGTTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTC  700

seq1  CAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCAAAAATAAATAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCAAAAATAAATAAAT  750

seq1  AAATAAATAAATAAATAAATAAATAAATAAATAAAATTGGAAAATTTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATAAATAAATAAATAAATAAATAAATAAAATTGGAAAATTTGAT  800

seq1  TCTGTAAAAAGATGCTTGTACAAGAAAAATCCACCCTGAGGCTGTATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAAAAGATGCTTGTACAAGAAAAATCCACCCTGAGGCTGTATTTA  850

seq1  TGGGTTAGAGACAATTCCTCAGTAGGCATGCTCAGTTTTAGATGTGTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTAGAGACAATTCCTCAGTAGGCATGCTCAGTTTTAGATGTGTGTA  900

seq1  TCATAGCAGGAATACAAGGAATAAAATACCCCAACCTCTTTTTTTTTCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGCAGGAATACAAGGAATAAAATACCCCAACCTCTTTTTTTTTCTT  950

seq1  GCTGTTGCCAATAGGCATACTTCTAAGATAGGTCTCTATAATATCTTTAT  1000
      ||||||||||||| ||||||||||||||||||||||||| ||||||||||
seq2  GCTGTTGCCAATA-GCATACTTCTAAGATAGGTCTCTAT-ATATCTTTAT  998

seq1  TCAGAATGTTATAGTCCATAGAGCCTTCTCCTTTAAAATGTAGGCCAAAC  1050
      |||||||| |||||| ||||||| ||||| ||||||| ||||||||||||
seq2  TCAGAATG-TATAGT-CATAGAG-CTTCTTCTTTAAATTGTAGGCCAAAC  1045

seq1  CTAGTAATTTAGAACCTTACAAAATATGTGATTGGGTTGCAAAGACCACA  1100
       |||||  |||||||||||||||||||||||||||| |||||  ||||||
seq2  TTAGTA--TTAGAACCTTACAAAATATGTGATTGGG-TGCAAGAACCACA  1092

seq1  GATAACTCTCTGCTACCCTTTCAGATGATGCTTGTTGATGA  1141
      ||| ||||||||||||||||   ||||||||||||||||||
seq2  GAT-ACTCTCTGCTACCCTT--CGATGATGCTTGTTGATGA  1130

seq1: chr18_22514564_22514759
seq2: B6Ng01-012K18.g_74_269 (reverse)

seq1  CCCCCCCCCCCCCAAACACACACACAGTTTTTACTTCTTTGGTAAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCAAACACACACACAGTTTTTACTTCTTTGGTAAAAATT  50

seq1  TACAACACCTTCTTCATAGGAGAAATTCTTTCATATCCCCAATGCATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAACACCTTCTTCATAGGAGAAATTCTTTCATATCCCCAATGCATTTT  100

seq1  GTAGTTTTTATAATAGACTGTCACTTTCTTCTTTCTACTTTCCTGTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTTTATAATAGACTGTCACTTTCTTCTTTCTACTTTCCTGTTTTT  150

seq1  ATATTTTCCCAAGTTGCTACTGGCCGAGTTGGTTTTGATCACATTT  196
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCCCAAGTTGCTACTGGCCGAGTTGGTTTTGATCACATTT  196