BAC Information

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BAC

Clone NameB6Ng01-014D22
Chromosome18 (Build37)
Map Location 39,974,906 - 39,975,778
singlet/doubletsinglet
Overlap genenone
Upstream geneFgf1, EG545253, Arhgap26, Nr3c1, Pabpc2
Downstream geneLOC100041939, Yipf5, Kctd16, EG225416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014D22.bB6Ng01-014D22.g
ACCDH848843DH848844
length8701,020
definitionDH848843|Mus musculus domesticus DNA, BAC clone: B6Ng01-014D22, 5' end.DH848844|Mus musculus domesticus DNA, BAC clone: B6Ng01-014D22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttagaaaacattttattgattttattttacatgtgtgtgtgt
gtttgcttgtatgtggtgaaagtgtactacaggtgtgcagtttccacaga
agccaagagaggagggagttaaagctccccatgaattggagttgccaaga
gtagtgaaccgtgtggatcttctgcaagattagagagaattcttgactgc
tgaatctctaatttcttaaaaagaatttcagctctcctgaagtgagtgag
ctaataaattatgttccttttgcatgtcaagcctggtggggtggttaatt
tcagctgatgctacaatgcgtttgacaggctcaacatcatttttgtctac
tctctggtgccagaaaatgcctgggaaagcttgtcacacagcaccatacg
caagtcaggagtgttcatctggaaactgttttgaacagaaaaacagtgat
acttccctgtcccagcaagaataatcatttgggatcacacaggaaggaag
atttgctatgcaacagaaaacgtctgttagaggtaacagacaagaaggca
gaaacccacacaagtcgggggaagccagtaatttagcagccttagctcat
accggagcttctgtttctcctggtgtcttagttagggttactactggatt
gattaaacaccatgaccaaaaagcaagttggggaggaaagggtttattca
gattttactttctacattgctattgatctcttaaagaaatcaggacagga
actcaaacagggtaggaacctggaggcaggagctgaagctgaggtatgga
agggtgctgttgctgattccatgtctggtcagccagcatcctttatagaa
tccgggctagctctatggat
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggatttttgtatattaaacc
atccctgcatccctggaataaaacctacttggtcagggtggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactacttctatttct
ttaggtgatatgggacactttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccattttgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttgtggatt
tctttcaggatctgttgttatgtctccctttttcatttctgattttgtta
attaggattttttccctgtgccctttagtgagtctagctaagggtttatc
tattcttgttgattttctcaaagaaccaactcctcgtttgggttatcttt
ggaatagttcctctttgtttcacttgggttgatttcaccccctgagtttg
attttttcctgccatctacctccttctggggtgaatttgcctcctttttt
ctagagctttagatgtgttgtcaagctgctagttgggctctctcccgttt
ctctgaggcactcaagctatgatttccatcttaagaatggctttcattgg
ttccaaaggtttggtacgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_39974906_39975778
seq2: B6Ng01-014D22.b_43_912

seq1  GAATTCCTTTAGAAAACATTTTATTGATTTTATTTTACATGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTAGAAAACATTTTATTGATTTTATTTTACATGTGTGTGTGT  50

seq1  GTTTGCTTGTATGTGGTGAAAGTGTACTACAGGTGTGCAGTTTCCACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTTGTATGTGGTGAAAGTGTACTACAGGTGTGCAGTTTCCACAGA  100

seq1  AGCCAAGAGAGGAGGGAGTTAAAGCTCCCCATGAATTGGAGTTGCCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGAGAGGAGGGAGTTAAAGCTCCCCATGAATTGGAGTTGCCAAGA  150

seq1  GTAGTGAACCGTGTGGATCTTCTGCAAGATTAGAGAGAATTCTTGACTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGAACCGTGTGGATCTTCTGCAAGATTAGAGAGAATTCTTGACTGC  200

seq1  TGAATCTCTAATTTCTTAAAAAGAATTTCAGCTCTCCTGAAGTGAGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTCTAATTTCTTAAAAAGAATTTCAGCTCTCCTGAAGTGAGTGAG  250

seq1  CTAATAAATTATGTTCCTTTTGCATGTCAAGCCTGGTGGGGTGGTTAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAAATTATGTTCCTTTTGCATGTCAAGCCTGGTGGGGTGGTTAATT  300

seq1  TCAGCTGATGCTACAATGCGTTTGACAGGCTCAACATCATTTTTGTCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGATGCTACAATGCGTTTGACAGGCTCAACATCATTTTTGTCTAC  350

seq1  TCTCTGGTGCCAGAAAATGCCTGGGAAAGCTTGTCACACAGCACCATACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGTGCCAGAAAATGCCTGGGAAAGCTTGTCACACAGCACCATACG  400

seq1  CAAGTCAGGAGTGTTCATCTGGAAACTGTTTTGAACAGAAAAACAGTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAGGAGTGTTCATCTGGAAACTGTTTTGAACAGAAAAACAGTGAT  450

seq1  ACTTCCCTGTCCCAGCAAGAATAATCATTTGGGATCACACAGGAAGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCTGTCCCAGCAAGAATAATCATTTGGGATCACACAGGAAGGAAG  500

seq1  ATTTGCTATGCAACAGAAAACGTCTGTTAGAGGTAACAGACAAGAAGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTATGCAACAGAAAACGTCTGTTAGAGGTAACAGACAAGAAGGCA  550

seq1  GAAACCCACACAAGTCGGGGGAAGCCAGTAATTTAGCAGCCTTAGCTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCACACAAGTCGGGGGAAGCCAGTAATTTAGCAGCCTTAGCTCAT  600

seq1  ACCGGAGCTTCTGTTTCTCCTGGTGTCTTAGTTAGGGTTACTACTGGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGGAGCTTCTGTTTCTCCTGGTGTCTTAGTTAGGGTTACTACTGGATT  650

seq1  GATTAAACACCATGACCAAAAAGCAAGTTGGGGAGGAAAGGGTTTATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAACACCATGACCAAAAAGCAAGTTGGGGAGGAAAGGGTTTATTCA  700

seq1  GATTTTAC-TTCTACATTGCTATTGATCTCTAAAAGAAATCAGGACAGGA  749
      |||||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  GATTTTACTTTCTACATTGCTATTGATCTCTTAAAGAAATCAGGACAGGA  750

seq1  ACTCAAACAGGGTAGGAACCTGGAGGCAGGAGCTGAAGCTGAGGTTATGG  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTCAAACAGGGTAGGAACCTGGAGGCAGGAGCTGAAGCTGAGG-TATGG  799

seq1  AAGGGTGCTGTTTGCTTGATTCCCATGTCTTGCTCAGCCAGCATCC-TTA  848
      |||||||||| |||| ||||| ||||||| || ||||||||||||| |||
seq2  AAGGGTGCTG-TTGC-TGATT-CCATGTC-TGGTCAGCCAGCATCCTTTA  845

seq1  TAGAATCCAGGGCTAGCTC-ATGGAT  873
      |||||||| |||||||||| ||||||
seq2  TAGAATCC-GGGCTAGCTCTATGGAT  870