BAC Information

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BAC

Clone NameB6Ng01-014K04
Chromosome18 (Build37)3 (Build37)
Map Location 60,060,351 - 60,060,659145,541,934 - 145,542,348
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAdamts19, A730017C20Rik, 4833446K15Rik, LOC667549
Downstream geneEG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1, EG629292, LOC667597, 2010002N04Rik, Dctn4, Rbm22, Myoz3, Synpo, LOC100042675, Ndst1, Rps14, LOC667619, Cd74, Tcof1, LOC100042699
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014K04.bB6Ng01-014K04.g
ACCDH849123DH849124
length861895
definitionDH849123|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K04, 5' end.DH849124|Mus musculus domesticus DNA, BAC clone: B6Ng01-014K04, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(60,060,351 - 60,060,659)(145,541,934 - 145,542,348)
sequence
gaattctctaggttaaatgttcccatgaattatagatgcttttactggtg
aaattatcccatgagtatgctgagccactgcattaaatctgatctttcat
tgagaaagaagaaaaaaaaaaggtctcatataagcaaggtagagaatgat
tgaaaagaaatgagaacagagacaaagaatcatttttttttctttccaac
aatgagaagatttgttgatgtttaacatgaactacagaaatgtgcactgg
ctaatatcccagaccaaccaaacaaccctattaaaaaatgggttatagag
ctaaacaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccctctcaact
gaggaatattgaatggctgaaaagcacctaaaaaatgttcaacatcctta
gtcatcagggaaatgcaaatcaaaacaattctgaaattccacctcacacc
agtcaaaatggctaaaatcaaaaattcaggtgacagcaaatgctggagag
gatgtggagaaaaaggaacactcctccagtgctggtgggattgcaagctg
gtacaactactctggaaatcagtttggcagttcctcagaaaattgaacat
agtactacttgaagacctagcaatagcactcctgggcatatacccagaag
atgttctaatatgtaataaggaaacatgctccactatgttcatagcagcc
ttatttataatagccagaagctggaaagaacccagatgtctctcaacaga
tgaatggatacagaaaaatgtggtacatttacacaatggagtactactga
gctattaaaaacatgaatttatgaaattcttaggcagatggatggatctg
gaggatgtcat
gaattctttgtttagttctgtaccccattttttaaaggtcaagattttat
tgtcttcataacaaaatctgcttagaaatggatcacttggccctttctct
tcttgtcgcctcccaattcaaaatgcttgcatctcttaatagccagtcct
cttagatctgcagttgggctcaacacactccagtctcagcacaatcttct
ttgtagttttagcctttttgcggaaaaaaggcttagtctgcccaccatag
ccactctgtttcctgtcataacaccgctttccctgggcatacaaagaatc
cttgcccttcttgtactgtgtcaccttgtggggttggtacttcccacatt
tcttgcagaatgtctggcgggttttaggtacattcaccatgttcgcagga
gccctagcagctcagaaagagcctgttccccatttttaatagggttattt
ggctctctagagtctaacttctttagttctttgtatatatttgatattag
ctttctgtcggatataagattggtaaggactttttcccaacctgttggtt
gcagttttgtcctactgacagtgtctttggccttacagaagatttgcaat
tttatgaggtcccatttgttgattcttgatcttacagcacaagccactgc
tgttctgttcaaaaaattttctcctgtgcccatgtgctcaaggctcttct
ccaccttcttttctattagttcctgtgtatctggttttataaggaagtcc
ttgatgcacttggacttgagctttgtacaaggagacaagaatggtcaatt
tgctttgttctacatgctaactgccagttgagctagcaccatttgttgaa
aatgttgtctttttccactggatggtttagctcctttgtcaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_60060351_60060659
seq2: B6Ng01-014K04.b_44_352 (reverse)

seq1  TTTGTTTAGCTCTATAACCCATTTTTTAATAGGGTTGTTTGGTTGGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTAGCTCTATAACCCATTTTTTAATAGGGTTGTTTGGTTGGTCTG  50

seq1  GGATATTAGCCAGTGCACATTTCTGTAGTTCATGTTAAACATCAACAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTAGCCAGTGCACATTTCTGTAGTTCATGTTAAACATCAACAAAT  100

seq1  CTTCTCATTGTTGGAAAGAAAAAAAAATGATTCTTTGTCTCTGTTCTCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCATTGTTGGAAAGAAAAAAAAATGATTCTTTGTCTCTGTTCTCAT  150

seq1  TTCTTTTCAATCATTCTCTACCTTGCTTATATGAGACCTTTTTTTTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCAATCATTCTCTACCTTGCTTATATGAGACCTTTTTTTTTTCT  200

seq1  TCTTTCTCAATGAAAGATCAGATTTAATGCAGTGGCTCAGCATACTCATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCAATGAAAGATCAGATTTAATGCAGTGGCTCAGCATACTCATG  250

seq1  GGATAATTTCACCAGTAAAAGCATCTATAATTCATGGGAACATTTAACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATTTCACCAGTAAAAGCATCTATAATTCATGGGAACATTTAACCT  300

seq1  AGAGAATTC  309
      |||||||||
seq2  AGAGAATTC  309

seq1: chr3_145541934_145542348
seq2: B6Ng01-014K04.g_91_503 (reverse)

seq1  ATTAAAAACGCTTCTCTCGCTCTTTCCGAGCTGCTAGCGCTCCTGCGAAC  50
      |||||||| |     |  |||||||| |||||||||| ||||||||||||
seq2  ATTAAAAATGGGGAACAGGCTCTTTCTGAGCTGCTAGGGCTCCTGCGAAC  50

seq1  ATGGTGAACGTGCCTAAAACCCGCCGGACATTCTGCAAGAAATGTGGGAA  100
      |||||||| || ||||||||||||| ||||||||||||||||||||||||
seq2  ATGGTGAATGTACCTAAAACCCGCCAGACATTCTGCAAGAAATGTGGGAA  100

seq1  GCACCAACCCCACAAGGTGACACAGTACAAGAAGGGCAAGGATTCTTTGT  150
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCAACCCCACAAGGTGACACAGTACAAGAAGGGCAAGGATTCTTTGT  150

seq1  ATGCCCAGGGAAAGCGGCGTTACGACAGGAAACAGAGTGGCTATGGTGGG  200
      ||||||||||||||||| |||| |||||||||||||||||||||||||||
seq2  ATGCCCAGGGAAAGCGGTGTTATGACAGGAAACAGAGTGGCTATGGTGGG  200

seq1  CAGACTAAGCCTATTTTCCGCAAAAAGGCTAAAACTACAAAGAAGATTGT  250
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CAGACTAAGCCTTTTTTCCGCAAAAAGGCTAAAACTACAAAGAAGATTGT  250

seq1  GCTGAGACTGGAGTGCGTTGAGCCCAACTGCAGATCTAAGAGGATGCTGG  300
      ||||||||||||||| ||||||||||||||||||||||||||||  ||||
seq2  GCTGAGACTGGAGTGTGTTGAGCCCAACTGCAGATCTAAGAGGA--CTGG  298

seq1  CTATTAAGAGATGCAAGCATTTTGAATTGGGAGGCGACAAGAAGAGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAAGAGATGCAAGCATTTTGAATTGGGAGGCGACAAGAAGAGAAAG  348

seq1  GGCCAAGTGATCCAGTTCTAAGCAGATTTTGTTATGAAGACAATAAAATC  400
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGCCAAGTGATCCATTTCTAAGCAGATTTTGTTATGAAGACAATAAAATC  398

seq1  TTGACCTTTCAAAAA  415
      ||||||||| |||||
seq2  TTGACCTTTAAAAAA  413