BAC Information

Click to search

BAC

Clone NameB6Ng01-014N17
Chromosome18 (Build37)
Map Location 86,791,277 - 86,792,376
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665382, LOC545269, LOC545270, LOC665402, Neto1
Downstream geneCbln2, LOC100039872, LOC100039881, LOC665437, LOC435580, LOC546719, LOC383318, Ppia-ps18_1039.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014N17.bB6Ng01-014N17.g
ACCDH849280DH849281
length1,074445
definitionDH849280|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N17, 5' end.DH849281|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaatattaaggcattccagaagcgctgtcaatctttaattct
tagaagtggaagaggtccatgagggccataaaacaaaattaaaactaagc
cacttctttctggcctcaagcaacaatgaaaattatttttaaaatatcca
caacctaactcctttctctgtcataagttgaactgactttcagttgcctt
ctttatatttcctcgtattggtactaaggatcaagataaacacaaagctc
aagctcacaggcaaacactgatgagccacagcccagactttgctttgctc
tcattactctaataaggggttgttggtgtggttcttctgctgcttcattt
tagccactataatttttaaaagaggctgcaacaacagcaattgaatgcct
gtttactgctgtttgttgttgttcttgttggggtttcggtatcccagagg
agactagttactttgcacttccattcatacacctccatgtaaagtattta
agctcacactgctttgtcccattgctgtttgacagggatggggtgacttt
ggtgttctaagtggacagtagattgttttcaaattttactgaactaaaat
ttgcttgtaaatacagtaattgcccaggtgaagacatcactttttttgtt
caccaagggactagtttagtaaaggatacaaagtcattttgtttggtcta
tgaggcatattaatgtggtaaagttcatggcttcaattccacttcaatta
gttttccccattctattaccatgggctgaattcctaagtacaggcatcca
accaaaaaataaattcatgaaagccaccaaggaaatggtttgaaaatata
cttgtatactttaaactttatcacaagtgaggcaaaataaggacagctta
aagtcatagctatgattgtgacatgatcatggaccagctgttcacatcca
gggctacacaaagtgtgcataaatgtttctagaatcagtatattgccaca
catttgaaagcaggcagaaagagatgtatttccagaccaagtaaaactat
tgccctacatgtaatgtggttcat

aggcaaatgttcaaaggagtgttctctctctctctctctctctctctctc
tctctctctctctctctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
agagacataagtatatatgtgtatatatgagtgtatatatgacacaaaca
ttttctcagtatacactatatgtgagaataaaaaaatcaataaattttta
caaaagttatataagaaaaaaagaaagagggcgtgggcgcgagcaagacg
gatacatataaaaaaaaatgaaaatagagagaaaggggggtgtctactaa
atttttatttgtatgtatttatatatatatatatttgtgagagaaacatg
gaggaatagttaaagaaaaggtgggagaggtaaaaaaaaatgggcgctct
gtatataaaaagaaaacaatcaataaaggggggagtggggggcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_86791277_86792376
seq2: B6Ng01-014N17.b_47_1120

seq1  GAATTCTCAAATATTAAGGCATTCCAGAAGCGCTGTCAATCTTTAATTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAATATTAAGGCATTCCAGAAGCGCTGTCAATCTTTAATTCT  50

seq1  TAGAAGTGGAAGAGGTCCATGAGGGCCATAAAACAAAATTAAAACTAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTGGAAGAGGTCCATGAGGGCCATAAAACAAAATTAAAACTAAGC  100

seq1  CACTTCTTTCTGGCCTCAAGCAACAATGAAAATTATTTTTAAAATATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTTTCTGGCCTCAAGCAACAATGAAAATTATTTTTAAAATATCCA  150

seq1  CAACCTAACTCCTTTCTCTGTCATAAGTTGAACTGACTTTCAGTTGCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTAACTCCTTTCTCTGTCATAAGTTGAACTGACTTTCAGTTGCCTT  200

seq1  CTTTATATTTCCTCGTATTGGTACTAAGGATCAAGATAAACACAAAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATTTCCTCGTATTGGTACTAAGGATCAAGATAAACACAAAGCTC  250

seq1  AAGCTCACAGGCAAACACTGATGAGCCACAGCCCAGACTTTGCTTTGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCACAGGCAAACACTGATGAGCCACAGCCCAGACTTTGCTTTGCTC  300

seq1  TCATTACTCTAATAAGGGGTTGTTGGTGTGGTTCTTCTGCTGCTTCATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTACTCTAATAAGGGGTTGTTGGTGTGGTTCTTCTGCTGCTTCATTT  350

seq1  TAGCCACTATAATTTTTAAAAGAGGCTGCAACAACAGCAATTGAATGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCACTATAATTTTTAAAAGAGGCTGCAACAACAGCAATTGAATGCCT  400

seq1  GTTTACTGCTGTTTGTTGTTGTTCTTGTTGGGGTTTCGGTATCCCAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTGCTGTTTGTTGTTGTTCTTGTTGGGGTTTCGGTATCCCAGAGG  450

seq1  AGACTAGTTACTTTGCACTTCCATTCATACACCTCCATGTAAAGTATTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAGTTACTTTGCACTTCCATTCATACACCTCCATGTAAAGTATTTA  500

seq1  AGCTCACACTGCTTTGTCCCATTGCTGTTTGACAGGGATGGGGTGACTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACACTGCTTTGTCCCATTGCTGTTTGACAGGGATGGGGTGACTTT  550

seq1  GGTGTTCTAAGTGGACAGTAGATTGTTTTCAAATTTTACTGAACTAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTCTAAGTGGACAGTAGATTGTTTTCAAATTTTACTGAACTAAAAT  600

seq1  TTGCTTGTAAATACAGTAATTGCCCAGGTGAAGACATCACTTTTTTTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGTAAATACAGTAATTGCCCAGGTGAAGACATCACTTTTTTTGTT  650

seq1  CACCAAGGGACTAGTTTAGTAAAGGATACAAAGTCATTTTGTTTGGTCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAGGGACTAGTTTAGTAAAGGATACAAAGTCATTTTGTTTGGTCTA  700

seq1  TGAGGCATATTAATGTGGTAAAGTTCATGGCTTCAATTCCACTTCAATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCATATTAATGTGGTAAAGTTCATGGCTTCAATTCCACTTCAATTA  750

seq1  GTTTTCCCCATTCTATTACCATGGGCTGAATTCCTAAGTACAGGCATCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCCCATTCTATTACCATGGGCTGAATTCCTAAGTACAGGCATCCA  800

seq1  ACCAAAAAATAAATTCATGAAAGCCACCAAGGAAATGGTTTGAAAATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAAATAAATTCATGAAAGCCACCAAGGAAATGGTTTGAAAATATA  850

seq1  CTTGTATACTTTAAACTTTATCACAAGTGAGGCAAAAATAAGGAACAGCT  900
      ||||||||||||||||||||||||||||||||| ||||||||| ||||||
seq2  CTTGTATACTTTAAACTTTATCACAAGTGAGGC-AAAATAAGG-ACAGCT  898

seq1  TAAAGTCAATAGCTATGAATTGGTTGAACAATGATCAATGGACCAGCTGT  950
      ||||||| ||||||||| ||||  |||   |||||| |||||||||||||
seq2  TAAAGTC-ATAGCTATG-ATTG--TGA--CATGATC-ATGGACCAGCTGT  941

seq1  TCACATCCAGGGGCTACACAAAAGTGTTGCATAAATGTTTCTAGAAATCA  1000
      ||||||||| ||||||||| |||||| ||||||||||||||||| |||| 
seq2  TCACATCCA-GGGCTACAC-AAAGTG-TGCATAAATGTTTCTAG-AATC-  986

seq1  AGTATATTGCCACACATTTGGAAAAGCAGGCAGAGAGAGATGTATTTCCA  1050
      ||||||||||||||||||||  |||||||||||| |||||||||||||||
seq2  AGTATATTGCCACACATTTG--AAAGCAGGCAGAAAGAGATGTATTTCCA  1034

seq1  AGGACCCCAGAGTAAAAACCTATTGCCCTACATGTTTAAATGTTGTTCAT  1100
        ||||    |||||||  ||||||||||||||||   ||||| ||||||
seq2  --GACC---AAGTAAAA--CTATTGCCCTACATGT---AATGTGGTTCAT  1074


| Home | SequenceCutter | Blast | Download |