BAC Information

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BAC

Clone NameB6Ng01-015D24
Chromosome18 (Build37)
Map Location 23,513,338 - 23,719,454
singlet/doubletdoublet
Overlap geneDtna
Upstream geneLOC100040547, Asxl3, Nol4, LOC100040579, LOC665797
Downstream geneMapre2, EG665813, LOC100040623, Zfp397, C230097I24Rik, Zfp35, Zfp191, D030070L09Rik, Galnt1, LOC665586, 2700062C07Rik, BC021395
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015D24.bB6Ng01-015D24.g
ACCDH849561DH849562
length9441,115
definitionDH849561|Mus musculus domesticus DNA, BAC clone: B6Ng01-015D24, 5' end.DH849562|Mus musculus domesticus DNA, BAC clone: B6Ng01-015D24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,513,338 - 23,514,271)(23,718,338 - 23,719,454)
sequence
gaattcttgctttacagggtttagaattccacatggtgtagtgacagtta
tgccttatgttgctgctgtgtaacttctttaaggtcagaagagctgaatc
actcattcagtaaatggcattgcagaatgtgatttaattggcaattctac
caaggcaggaagaatgcaaatgatagaaaagtgactgagagacaacagaa
aacagaaccatgtctaaagactttatatccattgattagaaaaattagaa
aagtgggcttgggtgctccagaatccagtacaaagggacaaattctattg
tacaatctattgtgtccactgcacaccatttacatgggaaagggaagtca
ctgtaggttaggagatgatataagaatttcccccacagtgatcatgtgct
tactgcaggctgttgtgaaaaaaaaaaatcaaaactctccactcttttct
tttctttttttatattaggtatttatttcatttacatttccagtgctata
ccaaaagtcccccatatgctccccaacccactcccccacccacccactcc
cacttcttagccctggcattcccctgtactgaggcatataaagtttgcac
gaccaatgggcctctctttccactgatggctgactaggccatcttctgat
acatatgcagctagagacactagctccggggggtactggtttagttcata
ctgttgttccaccctatagaatttgcagatccccccagctccttaggtac
ttttctcttaactcctccatgtggaggccctgtgatccatccaatagctg
actgttgagcatccacttctgttgtttggctaggccccggcataatctca
caagagacagctatatatggggtcctttcacaaaatctttgctagtgtta
gcaatggtgtcagcctttggaaacctgaatatggatggatcccc
gaattcattagaaatgaatgaacagggaactgatgctcactcgagccaga
ggaatttacttttcaaaatgtccctaaaatcttggaaggattgcaatcaa
gaaagttatgtgcaaattagtaatttattgaggcttttcttaaataattt
agttctgtaccttactcaagccccttcccaaactaatgttcaaatgttca
aaaacttagtgggaagaaagaaggtgttaaatgggaagccttggcagagt
ccacggaggttctgtatgtgactacattgcagatactgggctccaggtgt
atcaaccaagcattagtttggaagaagaatattagtaagaacacagtgtt
tagatttgattcttttgattaatggtcttgaggtaagtccttataagatg
tgaaaacaaatagcccctacgaaccttaccagttttgttttgctttatgc
tttccaatctccacaccgtctctgttcctaatgcacaatttctatcacag
ggcaggttttctttttttctttttgctaagagtcctcagagagaaacatc
acatctcacagagataacatctcagcttcattttaatttcctggttaagg
tgttgtaataaagcttcatgaaaaaggtctacaacacattttcatgtaaa
atcgaaatgagcatcctgccgatccccaaaggccctggcaggacacacac
tgcctatcaggaaaaaaatatccagtgcttcttaaattatgtttgggaga
ctgacatcattattcaaaatgagataataaattattggctcggtaaccat
cacactataaattaaatttaactaaattcaatccaatcaagcacttatta
tgccaattatttttcaacttgttgtactaggaatcataaatattaataag
ggaatggtaaatggggaaaagaccatatctaaattctcttgtccagttta
gcttgtacagaatatgtttactgacgttagaagcaagatactcttacaca
ctatccctgtggtggccagtcactgtagccgtcatgagtagtcttaatag
attctttcttgtgcttaactactccgtaattggttacacccccccagttt
gggcctttactgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_23513338_23514271
seq2: B6Ng01-015D24.b_46_989

seq1  GAATTCTTGCTTTACAGGGTTTAGAATTCCACATGGTGTAGTGACAGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGCTTTACAGGGTTTAGAATTCCACATGGTGTAGTGACAGTTA  50

seq1  TGCCTTATGTTGCTGCTGTGTAACTTCTTTAAGGTCAGAAGAGCTGAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTATGTTGCTGCTGTGTAACTTCTTTAAGGTCAGAAGAGCTGAATC  100

seq1  ACTCATTCAGTAAATGGCATTGCAGAATGTGATTTAATTGGCAATTCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTCAGTAAATGGCATTGCAGAATGTGATTTAATTGGCAATTCTAC  150

seq1  CAAGGCAGGAAGAATGCAAATGATAGAAAAGTGACTGAGAGACAACAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAGGAAGAATGCAAATGATAGAAAAGTGACTGAGAGACAACAGAA  200

seq1  AACAGAACCATGTCTAAAGACTTTATATCCATTGATTAGAAAAATTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAACCATGTCTAAAGACTTTATATCCATTGATTAGAAAAATTAGAA  250

seq1  AAGTGGGCTTGGGTGCTCCAGAATCCAGTACAAAGGGACAAATTCTATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGGCTTGGGTGCTCCAGAATCCAGTACAAAGGGACAAATTCTATTG  300

seq1  TACAATCTATTGTGTCCACTGCACACCATTTACATGGGAAAGGGAAGTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATCTATTGTGTCCACTGCACACCATTTACATGGGAAAGGGAAGTCA  350

seq1  CTGTAGGTTAGGAGATGATATAAGAATTTCCCCCACAGTGATCATGTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGTTAGGAGATGATATAAGAATTTCCCCCACAGTGATCATGTGCT  400

seq1  TACTGCAGGCTGTTGTGAAAAAAAAAAATCAAAACTCTCCACTCTTTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCAGGCTGTTGTGAAAAAAAAAAATCAAAACTCTCCACTCTTTTCT  450

seq1  TTTCTTTTTTTATATTAGGTATTTATTTCATTTACATTTCCAGTGCTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTTATATTAGGTATTTATTTCATTTACATTTCCAGTGCTATA  500

seq1  CCAAAAGTCCCCCATATGCTCCCCAACCCACTCCCCCACCCACCCACTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGTCCCCCATATGCTCCCCAACCCACTCCCCCACCCACCCACTCC  550

seq1  CACTTCTTAGCCCTGGCATTCCCCTGTACTGAGGCATATAAAGTTTGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTTAGCCCTGGCATTCCCCTGTACTGAGGCATATAAAGTTTGCAC  600

seq1  GACCAATGGGCCTCTCTTTCCACTGATGGCTGACTAGGCCATCTTCTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATGGGCCTCTCTTTCCACTGATGGCTGACTAGGCCATCTTCTGAT  650

seq1  ACATATGCAGCTAGAGACACTAGCTCCGGGGGGTACTGG-TTAGTTCATA  699
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACATATGCAGCTAGAGACACTAGCTCCGGGGGGTACTGGTTTAGTTCATA  700

seq1  CTGTTGTTCCA-CCTATAGAA-TTGCAGATCCCCCCAGCTCCTTAGGTAC  747
      ||||||||||| ||||||||| ||||||||||||||||||||||||||||
seq2  CTGTTGTTCCACCCTATAGAATTTGCAGATCCCCCCAGCTCCTTAGGTAC  750

seq1  -TTTCTC-TAACTCCTCCAT-TGGGAGCCCTGTGATCCATCCAATAGCTG  794
       |||||| |||||||||||| |||  ||||||||||||||||||||||||
seq2  TTTTCTCTTAACTCCTCCATGTGGAGGCCCTGTGATCCATCCAATAGCTG  800

seq1  ACTG-TGAGCATCCACTTCTG-TGTTT-GCTAGGCCCCGGCATAGTCTCA  841
      |||| |||||||||||||||| ||||| |||||||||||||||| |||||
seq2  ACTGTTGAGCATCCACTTCTGTTGTTTGGCTAGGCCCCGGCATAATCTCA  850

seq1  CAAGAGACAGCTATATAT-GGGTCCTTTCAGCAAAATC-TTGCTAGTGTA  889
      |||||||||||||||||| ||||||||||| ||||||| |||||||||| 
seq2  CAAGAGACAGCTATATATGGGGTCCTTTCA-CAAAATCTTTGCTAGTGTT  899

seq1  AGCAATGGTGTCAGCCTTTGG-AAGCTGATTATGGGATGGATCCCC  934
      ||||||||||||||||||||| || |||| ||| ||||||||||||
seq2  AGCAATGGTGTCAGCCTTTGGAAACCTGAATAT-GGATGGATCCCC  944

seq1: chr18_23718338_23719454
seq2: B6Ng01-015D24.g_69_1183 (reverse)

seq1  AGACAGTAAAAGCCCAAACTGGGGGTGT-TAACAATATACAGAGTGGTAA  49
      || ||||||| |||||||||||||| || |||| |  ||| |||| || |
seq2  AGGCAGTAAAGGCCCAAACTGGGGGGGTGTAACCAATTACGGAGTAGTTA  50

seq1  AGCCACATAGAAAGAATCTATAAAGAACTACTCAATGACGGCTACAAAGT  99
      || |||| ||||||||||||| ||| ||||||| |||||||||||  |||
seq2  AG-CACA-AGAAAGAATCTATTAAG-ACTACTC-ATGACGGCTAC--AGT  94

seq1  GACTGGCCACAACAGGGATAGTGTGTTAGAGTATCTTGCTTCTAACGTCA  149
      |||||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  GACTGGCCACCACAGGGATAGTGTGTAAGAGTATCTTGCTTCTAACGTCA  144

seq1  GTAAACATATTCTGTACAAGCTAAACTGGACAAGGAGAATTTAGATATTG  199
      ||||||||||||||||||||||||||||||||| ||||||||||||| ||
seq2  GTAAACATATTCTGTACAAGCTAAACTGGACAA-GAGAATTTAGATA-TG  192

seq1  TTCTTTTCCCCATTTA-CATTCCCTTATT-ATTTTTATGATTCCTGGTAC  247
       ||||||||||||||| |||||||||||| || |||||||||||| ||||
seq2  GTCTTTTCCCCATTTACCATTCCCTTATTAATATTTATGATTCCTAGTAC  242

seq1  AACAAGTTG-AAAATAATTGGCATAATAAGTGCTTGATTGGATTGAATTT  296
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGTTGAAAAATAATTGGCATAATAAGTGCTTGATTGGATTGAATTT  292

seq1  AGTTAAATTTAATTTATAGTGTGATGGTTACCGAGCCAATAA-TTATTAT  345
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGTTAAATTTAATTTATAGTGTGATGGTTACCGAGCCAATAATTTATTAT  342

seq1  CTCATTTTGAATAATGATGTCAGTCT-CCAAACATAATTTAAGAAGCACT  394
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTCATTTTGAATAATGATGTCAGTCTCCCAAACATAATTTAAGAAGCACT  392

seq1  GGATATTTTTTTCCTGATAGGCAGTGTGTGTCCTGCCAGGGCCTTTGGGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTTTTTTCCTGATAGGCAGTGTGTGTCCTGCCAGGGCCTTTGGGG  442

seq1  ATCGGCAGGATGCTCATTTCGATTTTACATGAAAATGTGTTGTAGACCTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGCAGGATGCTCATTTCGATTTTACATGAAAATGTGTTGTAGACCTT  492

seq1  TTTCATGAAGCTTTATTACAACACCTTAACCAGGAAATTAAAATGAAGCT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGAAGCTTTATTACAACACCTTAACCAGGAAATTAAAATGAAGCT  542

seq1  GAGATGTTATCTCTGTGAGATGTGATGTTTCTCTCTGAGGACTCTTAGCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTTATCTCTGTGAGATGTGATGTTTCTCTCTGAGGACTCTTAGCA  592

seq1  AAAAGAAAAAAAGAAAACCTGCCCTGTGATAGAAATTGTGCATTAGGAAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAAAAGAAAACCTGCCCTGTGATAGAAATTGTGCATTAGGAAC  642

seq1  AGAGACGGTGTGGAGATTGGAAAGCATAAAGCAAAACAAAACTGGTAAGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACGGTGTGGAGATTGGAAAGCATAAAGCAAAACAAAACTGGTAAGG  692

seq1  TTCGTAGGGGCTATTTGTTTTCACATCTTATAAGGACTTACCTCAAGACC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTAGGGGCTATTTGTTTTCACATCTTATAAGGACTTACCTCAAGACC  742

seq1  ATTAATCAAAAGAATCAAATCTAAACACTGTGTTCTTACTAATATTCTTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCAAAAGAATCAAATCTAAACACTGTGTTCTTACTAATATTCTTC  792

seq1  TTCCAAACTAATGCTTGGTTGATACACCTGGAGCCCAGTATCTGCAATGT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAACTAATGCTTGGTTGATACACCTGGAGCCCAGTATCTGCAATGT  842

seq1  AGTCACATACAGAACCTCCGTGGACTCTGCCAAGGCTTCCCATTTAACAC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACATACAGAACCTCCGTGGACTCTGCCAAGGCTTCCCATTTAACAC  892

seq1  CTTCTTTCTTCCCACTAAGTTTTTGAACATTTGAACATTAGTTTGGGAAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTCTTCCCACTAAGTTTTTGAACATTTGAACATTAGTTTGGGAAG  942

seq1  GGGCTTGAGTAAGGTACAGAACTAAATTATTTAAGAAAAGCCTCAATAAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTGAGTAAGGTACAGAACTAAATTATTTAAGAAAAGCCTCAATAAA  992

seq1  TTACTAATTTGCACATAACTTTCTTGATTGCAATCCTTCCAAGATTTTAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAATTTGCACATAACTTTCTTGATTGCAATCCTTCCAAGATTTTAG  1042

seq1  GGACATTTTGAAAAGTAAATTCCTCTGGCTCGAGTGAGCATCAGTTCCCT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTTTGAAAAGTAAATTCCTCTGGCTCGAGTGAGCATCAGTTCCCT  1092

seq1  GTTCATTCATTTCTAATGAATTC  1117
      |||||||||||||||||||||||
seq2  GTTCATTCATTTCTAATGAATTC  1115