BAC Information

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BAC

Clone NameB6Ng01-016N15
Chromosome18 (Build37)
Map Location 58,723,368 - 58,885,752
singlet/doubletdoublet
Overlap geneSlc27a6, Isoc1
Upstream gene1700011I03Rik, 2210409D07Rik, Slc12a2, 9330166H04Rik, Fbn2
Downstream geneAdamts19, A730017C20Rik, 4833446K15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016N15.bB6Ng01-016N15.g
ACCDH850699DH850700
length1,0891,055
definitionDH850699|Mus musculus domesticus DNA, BAC clone: B6Ng01-016N15, 5' end.DH850700|Mus musculus domesticus DNA, BAC clone: B6Ng01-016N15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,723,368 - 58,724,457)(58,884,685 - 58,885,752)
sequence
gaattctgcctcagcggaatcagctgaattttaaggatgtgaaatcgtgt
gtttttgtttttgtttttttaatttgctcacttcctttattctagtaaac
atgactactctttgtaaaccctcactattccctagactccagcctcaacg
aagattcggttcccaatcataatggaactcctcactaacattccaattca
ttaagaaattatagaaatttagctgttggcttataattccagatggctga
cttgaaattatgataattacaataagtagttgaaagactcaataagttca
aatgccagaaagaatagtttaaacagaacgtagagctattgatttgaaag
gctcctttgtgctgtctttctgtatctgtcttgtctttccttccagccat
ccttgtgaggttttgctcctggccaacagcagtctgcacacagctggatg
tggcgtaacctcatgcaccaatcagaactgagcattcgccttgggttctt
acatcttgctgtatttgaacttgtgatagaaataaagattaataagacac
ttaaagtctcaaccccaagcttcctggtgacatggcaccctgttagttat
gtgtttgttttgagtttcttacaaattctatttatgaattatttagtgcc
acttgactcattttattaatttcattgaaaatgactttttcatagaatag
attttattcgtgtttttccctctctctcagatcctcctgacctgcctaac
ttcatgttctctaactttgttctctgttttctctttctcaaacaacaaca
aagaaaaccacaacacacacacacacacacacacacacacacacacacac
acacacgcacacgcacacgcacatgcacacgccccagacacaagaaaaga
aaatcaaaacaaaagcaaaagaggaggagaggaaaaaaaaacagcaaatg
caggcaggcgtggtgctcatgccttttatcccagcactcggggaggcagg
aggcaagcagatttctgagttggaggccagccctggttctacagagtgag
ttcaaggacagccaaggctaactagagaaaccttgtctc
gaattcctagagttctcctggttcaaacttgaaatgtgtaatttgactta
gtgttataaaatggaaaggatttttcttatactagcaatgcatagcaagg
taaagagaacacagtatctcatgtgcatatgaccaacatggacagttaca
aattatacaagaaacgggatctttcttgatgtcttagtagtggttttatt
tttattctagaagtttacaggcatagtaaactctgggttttttttttttt
tgtattgttttgttttgttttgtttttgaatattacttaccctgagtttg
gctcagaggatgactgatttggggtccatatttggttaccactaagccca
gctcatgatgaacgcatgacagagtctgacctttggttttttcagaccac
aggcagcagctgtttctactccagtgtcagctcacagtgataagtcctgt
gctgtgtcacattagcttctaaagcagtctcaaggctgaaagtattatga
tgtcatacaaagcataaatatgtttccacatgtcaagctatacatccaat
tggccctcaggtctatagtcaaaaatatcataaacacaaaaagactatat
gatttgcctactggataatcaagatttgttactctattggtcttatttgc
ttttatttaaaataaattcatttaaatgaataaaatattaacatatgtgg
taacataagatgacttaatcttaagtattgatatttattgacttgctgat
gtaacttttcaaagttataagtatcaccaacatttaaccaatttgccatt
accaaaaatgtggcagtagaaataatctagtctagatcgctagaacagga
tggtttttctttctcattgtaagaggtaatttggggtgcttttagaataa
gtaagcttgtttttaagatagacacctaagcatttttaattaagttacca
tctagacaaatggtaatacgagggcggaagtatttataaaaataatgacg
agagaagctggaagcatccactaaatcaggactaacaaggctgcactttc
tccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58723368_58724457
seq2: B6Ng01-016N15.b_48_1136

seq1  GAATTCTGCCTCAGCGGAATCAGCTGAATTTTAAGGATGTGAAATCGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCCTCAGCGGAATCAGCTGAATTTTAAGGATGTGAAATCGTGT  50

seq1  GTTTTTGTTTTTGTTTTTTTAATTTGCTCACTTCCTTTATTCTAGTAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTGTTTTTGTTTTTTTAATTTGCTCACTTCCTTTATTCTAGTAAAC  100

seq1  ATGACTACTCTTTGTAAACCCTCACTATTCCCTAGACTCCAGCCTCAACG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTACTCTTTGTAAACCCTCACTATTCCCTAGACTCCAGCCTCAACG  150

seq1  AAGATTCGGTTCCCAATCATAATGGAACTCCTCACTAACATTCCAATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTCGGTTCCCAATCATAATGGAACTCCTCACTAACATTCCAATTCA  200

seq1  TTAAGAAATTATAGAAATTTAGCTGTTGGCTTATAATTCCAGATGGCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAATTATAGAAATTTAGCTGTTGGCTTATAATTCCAGATGGCTGA  250

seq1  CTTGAAATTATGATAATTACAATAAGTAGTTGAAAGACTCAATAAGTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAATTATGATAATTACAATAAGTAGTTGAAAGACTCAATAAGTTCA  300

seq1  AATGCCAGAAAGAATAGTTTAAACAGAACGTAGAGCTATTGATTTGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCAGAAAGAATAGTTTAAACAGAACGTAGAGCTATTGATTTGAAAG  350

seq1  GCTCCTTTGTGCTGTCTTTCTGTATCTGTCTTGTCTTTCCTTCCAGCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTTTGTGCTGTCTTTCTGTATCTGTCTTGTCTTTCCTTCCAGCCAT  400

seq1  CCTTGTGAGGTTTTGCTCCTGGCCAACAGCAGTCTGCACACAGCTGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGAGGTTTTGCTCCTGGCCAACAGCAGTCTGCACACAGCTGGATG  450

seq1  TGGCGTAACCTCATGCACCAATCAGAACTGAGCATTCGCCTTGGGTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGTAACCTCATGCACCAATCAGAACTGAGCATTCGCCTTGGGTTCTT  500

seq1  ACATCTTGCTGTATTTGAACTTGTGATAGAAATAAAGATTAATAAGACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTGCTGTATTTGAACTTGTGATAGAAATAAAGATTAATAAGACAC  550

seq1  TTAAAGTCTCAACCCCAAGCTTCCTGGTGACATGGCACCCTGTTAGTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTCTCAACCCCAAGCTTCCTGGTGACATGGCACCCTGTTAGTTAT  600

seq1  GTGTTTGTTTTGAGTTTCTTACAAATTCTATTTATGAATTATTTAGTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGTTTTGAGTTTCTTACAAATTCTATTTATGAATTATTTAGTGCC  650

seq1  ACTTGACTCATTTTATTAATTTCATTGAAAATGACTTTTTCATAGAATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACTCATTTTATTAATTTCATTGAAAATGACTTTTTCATAGAATAG  700

seq1  ATTTTATTCGTGTTTTTCCCTCTCTCTCAGATCCTCCTGACCTGCCTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATTCGTGTTTTTCCCTCTCTCTCAGATCCTCCTGACCTGCCTAAC  750

seq1  TTCATGTTCTCTAACTTTGTTCTCTGTTTTCTCTTTCTCAAACAACAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTCTCTAACTTTGTTCTCTGTTTTCTCTTTCTCAAACAACAACA  800

seq1  AAGAAAACCACAACACACACACACACACACACACACACACACACACACAC  850
      ||||||||||||  ||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACCACA--ACACACACACACACACACACACACACACACACACAC  848

seq1  ACACACACGCACACGCACACGCACATGCACACGCCCCAGACACAAGAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACGCACACGCACACGCACATGCACACGCCCCAGACACAAGAAAA  898

seq1  GAAAATCAAAACAAAAAGCAAAAGAGGAAGAGAGGAAAAAAAAAACAGCA  950
      |||||||||||| ||||||||||||||| |||||| ||||||||||||| 
seq2  GAAAATCAAAAC-AAAAGCAAAAGAGGAGGAGAGG-AAAAAAAAACAGC-  945

seq1  AAATGCAGGCAGGCGTGGTGCTCATGCCTTTAATCCCAGCACTC-GGGAG  999
      ||||||||||||||||||||||||||||||| |||||||||||| |||||
seq2  AAATGCAGGCAGGCGTGGTGCTCATGCCTTTTATCCCAGCACTCGGGGAG  995

seq1  GCA-GAGGCAGGCAGATTTCTGAGTTGGAGGCCAG-CCTGG-TCTACAGA  1046
      ||| |||||| |||||||||||||||||||||||| ||||| ||||||||
seq2  GCAGGAGGCAAGCAGATTTCTGAGTTGGAGGCCAGCCCTGGTTCTACAGA  1045

seq1  GTGAGTTCCAGGACAGCCAAGGCTACACAGAGAAACCCTGTCTC  1090
      |||||||| ||||||||||||||||   ||||||||| ||||||
seq2  GTGAGTTCAAGGACAGCCAAGGCTAACTAGAGAAACCTTGTCTC  1089

seq1: chr18_58884685_58885752
seq2: B6Ng01-016N15.g_65_1119 (reverse)

seq1  AGGGAGAAAGTGGGCAGCCTTGTCTAGTCCCTGATTTTAGTGGGATTGCT  50
      |||||||||||  |||||||||| |||| ||||| ||||||||   ||||
seq2  AGGGAGAAAGT--GCAGCCTTGT-TAGT-CCTGA-TTTAGTGG--ATGCT  43

seq1  TCCAGCTTCTCTCCTTCATTTTATTTTTATAAAATAACTTTCGCCTTCGT  100
      |||||||||||| | |||  |||||||||||||   |||| |||| ||||
seq2  TCCAGCTTCTCT-CGTCA--TTATTTTTATAAA--TACTTCCGCCCTCGT  88

seq1  ATTTTACCATTTGTCTTGATGGTAACTTTAATTAAAAATGCTTAGGTGTC  150
      |  ||||||||||||| ||||||||| |||||||||||||||||||||||
seq2  A--TTACCATTTGTCTAGATGGTAAC-TTAATTAAAAATGCTTAGGTGTC  135

seq1  TATCTTAAAAACAAGCTTACTTA-TCTAAAAGCACCCCAAAATAACTTCT  199
      ||||||||||||||||||||||| |||||||||||||| |||| || |||
seq2  TATCTTAAAAACAAGCTTACTTATTCTAAAAGCACCCC-AAATTACCTCT  184

seq1  TACAATGAGAA--GAAAACCATCCTGTTCTAGCGATCTAGACTAGATTAT  247
      |||||||||||   ||||||||||||||||||||||||||||||||||||
seq2  TACAATGAGAAAGAAAAACCATCCTGTTCTAGCGATCTAGACTAGATTAT  234

seq1  TTCTACTGCCACATTTTTGGTAATGGCAAATTGGTTAAATGTTGGTGATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACTGCCACATTTTTGGTAATGGCAAATTGGTTAAATGTTGGTGATA  284

seq1  CTTATAACTTTGAAAAGTTACATCAGCAAGTCAATAAATATCAATACTTA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAACTTTGAAAAGTTACATCAGCAAGTCAATAAATATCAATACTTA  334

seq1  AGATTAAGTCATCTTATGTTACCACATATGTTAATATTTTATTCATTTAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAAGTCATCTTATGTTACCACATATGTTAATATTTTATTCATTTAA  384

seq1  ATGAATTTATTTTAAATAAAAGCAAATAAGACCAATAGAGTAACAAATCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTATTTTAAATAAAAGCAAATAAGACCAATAGAGTAACAAATCT  434

seq1  TGATTATCCAGTAGGCAAATCATATAGTCTTTTTGTGTTTATGATATTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATCCAGTAGGCAAATCATATAGTCTTTTTGTGTTTATGATATTTT  484

seq1  TGACTATAGACCTGAGGGCCAATTGGATGTATAGCTTGACATGTGGAAAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATAGACCTGAGGGCCAATTGGATGTATAGCTTGACATGTGGAAAC  534

seq1  ATATTTATGCTTTGTATGACATCATAATACTTTCAGCCTTGAGACTGCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATGCTTTGTATGACATCATAATACTTTCAGCCTTGAGACTGCTT  584

seq1  TAGAAGCTAATGTGACACAGCACAGGACTTATCACTGTGAGCTGACACTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGCTAATGTGACACAGCACAGGACTTATCACTGTGAGCTGACACTG  634

seq1  GAGTAGAAACAGCTGCTGCCTGTGGTCTGAAAAAACCAAAGGTCAGACTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGAAACAGCTGCTGCCTGTGGTCTGAAAAAACCAAAGGTCAGACTC  684

seq1  TGTCATGCGTTCATCATGAGCTGGGCTTAGTGGTAACCAAATATGGACCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGCGTTCATCATGAGCTGGGCTTAGTGGTAACCAAATATGGACCC  734

seq1  CAAATCAGTCATCCTCTGAGCCAAACTCAGGGTAAGTAATATTCAAAAAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCAGTCATCCTCTGAGCCAAACTCAGGGTAAGTAATATTCAAAAAC  784

seq1  AAAACAAAACAAAACAATACAAAAAAAAAAAAAACCCAGAGTTTACTATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAACAAAACAATACAAAAAAAAAAAAAACCCAGAGTTTACTATG  834

seq1  CCTGTAAACTTCTAGAATAAAAATAAAACCACTACTAAGACATCAAGAAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAAACTTCTAGAATAAAAATAAAACCACTACTAAGACATCAAGAAA  884

seq1  GATCCCGTTTCTTGTATAATTTGTAACTGTCCATGTTGGTCATATGCACA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCGTTTCTTGTATAATTTGTAACTGTCCATGTTGGTCATATGCACA  934

seq1  TGAGATACTGTGTTCTCTTTACCTTGCTATGCATTGCTAGTATAAGAAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATACTGTGTTCTCTTTACCTTGCTATGCATTGCTAGTATAAGAAAA  984

seq1  ATCCTTTCCATTTTATAACACTAAGTCAAATTACACATTTCAAGTTTGAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCCATTTTATAACACTAAGTCAAATTACACATTTCAAGTTTGAA  1034

seq1  CCAGGAGAACTCTAGGAATTC  1068
      |||||||||||||||||||||
seq2  CCAGGAGAACTCTAGGAATTC  1055