BAC Information

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BAC

Clone NameB6Ng01-016P24
Chromosome18 (Build37)
Map Location 81,125,506 - 81,125,790
singlet/doubletsinglet
Overlap geneAtp9b
Upstream geneLOC433204, LOC545267, LOC100040632, LOC620963, LOC100040604, LOC620692, LOC100040593, LOC639825, Pard6g, Zfp508, LOC665009, LOC100039311, 1110032A13Rik, Txnl4, 1810005K13Rik, Pqlc1, Kcng2, D330025C20Rik, Ctdp1, LOC669389, LOC100039336, A430076E10Rik, LOC100039348, Nfatc1
Downstream geneSall3, LOC665124, LOC100039458, LOC100040871
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016P24.bB6Ng01-016P24.g
ACCDH850805DH850806
length1,208285
definitionDH850805|Mus musculus domesticus DNA, BAC clone: B6Ng01-016P24, 5' end.DH850806|Mus musculus domesticus DNA, BAC clone: B6Ng01-016P24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagaaaacatcaaaaggattatccactatgatcaagatggcttc
atctcagagatacaaggataacgcaacatacataaatcaataaaccgtct
actacataaacgtgtagagaactcttaatccaacaacaaggttgctctgg
caaagtgtcacatccaaagaccttctaggtctgtgtgatacagctggaat
gatacaccattaatccctccgggtggtacacagacacattcttagtatac
acctttaatcccaaacagtgatggtaaagttagtttgtagaaggaagcag
ccagtttcaacgtgacttcaagttgaggtgtagacaaagtggcaaattaa
aggaagatttcacagtgtgagtcaaagataggatatgcccacctctcatg
aggacagacattaaagagagactacttaacaggagcacaaaatgcctcag
gaatggagagcaaattcaggcagtgcagtggaggtcagttcagtgcagtt
tggtgcagttcaggcaaatgacattgatttcatgcagttcccttcagttc
atacagtcagtgcagttcagcacacggaatttgggtgctggatttttttt
tcaagcagaataattcagtaagaagccatgagaagccagtttgaatcagt
cagcttggagaagagttttaagccagaacagctgagttgaaccaaccagc
cagagctcagaaagaactagaaagggggagcctattcagcagtaagcctc
ctagatgacaattacatctggcacataaaagttactttcacataagcaga
ctagaatccaaaaaccacaggatcatctcattgaatacgcagaaaggcct
ttaacaaaatccaacacccctacatgatataagtcttggagagattatgg
atacaagaaacatacctcaacattataaaggcaatttatagtaagtccat
agccagacatcaacctaactgaaagaaactcaaagatttccactaactag
gaacaggaaaggatgcctgctctctacatacctgtcagtagagtgctgaa
gtctgcatggaccatagcactgaggagattgggatacaaataagaacgag
aggaattcatatctgcgatgatgatttcttaaaagattcttaaacttcat
gaagctcttacatgatacactgatcagctggagacacggggataagacag
atttatac
catatcaggtacatagcactgtctataacctgagatgaggacacaaagaa
atgcagggcatttgagctcattatccagccatcctagccagctagtgcga
ccagattcagcaagggaccctgtctggagaaacaagggagagactaagca
cagcactgaggaagcagctgcagagccaggggcatctctgagtgtaaggc
aactaggtctacatgtagagtccagaacagccagagctacataatagaga
ccctgtctcaaaaagaagaaaggtggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_81125506_81125790
seq2: B6Ng01-016P24.g_74_358

seq1  CATATCAGGTACATAGCACTGTCTATAACCTGAGATGAGGACACAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCAGGTACATAGCACTGTCTATAACCTGAGATGAGGACACAAAGAA  50

seq1  ATGCAGGGCATTTGAGCTCATTATCCAGCCATCCTAGCCAGCTAGTGCGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGGCATTTGAGCTCATTATCCAGCCATCCTAGCCAGCTAGTGCGA  100

seq1  CCAGATTCAGCAAGGGACCCTGTCTGGAGAAACAAGGGAGAGACTAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATTCAGCAAGGGACCCTGTCTGGAGAAACAAGGGAGAGACTAAGCA  150

seq1  CAGCACTGAGGAAGCAGCTGCAGAGCCAGGGGCATCTCTGAGTGTAAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTGAGGAAGCAGCTGCAGAGCCAGGGGCATCTCTGAGTGTAAGGC  200

seq1  AACTAGGTCTACATGTAGAGTCCAGAACAGCCAGAGCTACATAATAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGTCTACATGTAGAGTCCAGAACAGCCAGAGCTACATAATAGAGA  250

seq1  CCCTGTCTCAAAAAGAAGAAAGGTGGGGGGGGGGG  285
      |||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTCAAAAAGAAGAAAGGTGGGGGGGGGGG  285