BAC Information

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BAC

Clone NameB6Ng01-019M21
Chromosome18 (Build37)
Map Location 23,650,168 - 23,651,342
singlet/doubletsinglet
Overlap geneDtna
Upstream geneAsxl3, Nol4, LOC100040579, LOC665797
Downstream geneMapre2, EG665813, LOC100040623, Zfp397, C230097I24Rik, Zfp35, Zfp191, D030070L09Rik, Galnt1, LOC665586, 2700062C07Rik, BC021395
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019M21.b
ACCDH852788
length1,163
definitionDH852788|Mus musculus domesticus DNA, BAC clone: B6Ng01-019M21, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaccaatgcaccctgaaagtgttttctgtaccagatacaaacaa
atatgaatgttgctaagatctagatgtggaaataagaattcagagagaga
aaatacaactttagatatcaacacccaagaatgaatataatctacagatt
agagaatgggtagataatttaactaggtcaaactaggcaggatgtctagg
caggaaatcacccctatagtgtcccaccatgcttagaaaacatttgttga
tgggatattaggtgtgttttcctattctattttactttgtgtttaaggtc
ttggagatcacagcacagagctcactgtgttctgtagaggggcgggtgct
gttggtgcctcacagcagagctggtaaccaagatcctgtgcaggaatgac
agtgcctactaagaatcttctcccataactcagctactaaatggcaagtg
cctgattggtcagaaggtagggggagttgactctacctgtcaatcaagaa
gggtgtgtgtctgtacttgaccatgagctggaggagactgggaagccaat
gcaaggttgtaggtttgggaaaaattagttgctgatgataactatggaaa
aaaaatacttcagaaaagaaagaaagttaggaaaaaaggatgtcatcatg
atagggcaacacattattatgaactagcagagattagccaaaacaatgga
aggggcacatggtggtttatagggaaagagaaaaaggcaaatatgattag
gaagacacagagcaaaactaccagagggggactagaaagagttctgagag
aaatgcacactgtggagaaaattatgtgaattgaggctactgacaagcta
acggctgaaaatttgcttaatacacttaattgaattccattactagaatg
aatgtgaagggcctttcctctagggttgaatagtttaacccatactatga
ctatggggcactttcaacctttctggtgttcatggcaactgttggaagcc
gttgtcatgttgatatggaaaggctaagtcacaagggtctaggggctcac
tcggttcaattggaggcattggggcttgctcccattggaactggccagtt
ctgaaccaatgctttctttcgatcctcctagtgatggtgccattggaaac
tggagaaggtaga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_23650168_23651342
seq2: B6Ng01-019M21.b_48_1210 (reverse)

seq1  TCTACCTTCTCCAGTTTCCCCATTGCACATGTCACTGGGAGGGTTTGAAA  50
      ||||||||||||||||| || || ||||   ||||| |||||   |  ||
seq2  TCTACCTTCTCCAGTTT-CCAATGGCAC-CATCACTAGGAGG--ATCGAA  46

seq1  AGAAGGCATTGGTTTCATGAGAACCTGGCCAGGCTGCCATGTGGAGCAAG  100
      |||| ||||||||    | |||| ||||||||  | |||   ||||||||
seq2  AGAAAGCATTGGT----TCAGAA-CTGGCCAG--TTCCAATGGGAGCAAG  89

seq1  CACCCATGCCTCCAATTGACCCGAGTGAGCCCCT-CAGCCCTGTGACTTA  149
      | || |||||||||||||| ||||||||||||||  | || |||||||||
seq2  CCCCAATGCCTCCAATTGAACCGAGTGAGCCCCTAGACCCTTGTGACTTA  139

seq1  GCCTCTGCAATATC-ACATGACAACGGCTTCCAACAGTTGCCATGGACAA  198
      |||| | | ||||| |||||||||||||||||||||||||||||| || |
seq2  GCCT-TTCCATATCAACATGACAACGGCTTCCAACAGTTGCCATGAAC-A  187

seq1  CCAGAAGGGTTGAAAGTGCCCCATAGTCATAGTATGGGTTAAACTATTCA  248
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAGGTTGAAAGTGCCCCATAGTCATAGTATGGGTTAAACTATTCA  237

seq1  ACCCTAGAGGAAAGGGCCCTTCACATTCATTCTAGTAATGGAATTCAATT  298
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  ACCCTAGAGGAAA-GGCCCTTCACATTCATTCTAGTAATGGAATTCAATT  286

seq1  AAGTGTATTAAGCAAATTTTCAGCCGTTAGCTTGTCAGTAGCCTCAATTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTATTAAGCAAATTTTCAGCCGTTAGCTTGTCAGTAGCCTCAATTC  336

seq1  ACATAATTTTCTCCACAGTGTGCATTTCTCTCAGAACTCTTTCTAGTCCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATTTTCTCCACAGTGTGCATTTCTCTCAGAACTCTTTCTAGTCCC  386

seq1  CCTCTGGTAGTTTTGCTCTGTGTCTTCCTAATCATATTTGCCTTTTTCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGTAGTTTTGCTCTGTGTCTTCCTAATCATATTTGCCTTTTTCTC  436

seq1  TTTCCCTATAAACCACCATGTGCCCCTTCCATTGTTTTGGCTAATCTCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTATAAACCACCATGTGCCCCTTCCATTGTTTTGGCTAATCTCTG  486

seq1  CTAGTTCATAATAATGTGTTGCCCTATCATGATGACATCCTTTTTTCCTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTCATAATAATGTGTTGCCCTATCATGATGACATCCTTTTTTCCTA  536

seq1  ACTTTCTTTCTTTTCTGAAGTATTTTTTTTCCATAGTTATCATCAGCAAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTCTTTTCTGAAGTATTTTTTTTCCATAGTTATCATCAGCAAC  586

seq1  TAATTTTTCCCAAACCTACAACCTTGCATTGGCTTCCCAGTCTCCTCCAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTCCCAAACCTACAACCTTGCATTGGCTTCCCAGTCTCCTCCAG  636

seq1  CTCATGGTCAAGTACAGACACACACCCTTCTTGATTGACAGGTAGAGTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGGTCAAGTACAGACACACACCCTTCTTGATTGACAGGTAGAGTCA  686

seq1  ACTCCCCCTACCTTCTGACCAATCAGGCACTTGCCATTTAGTAGCTGAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCCCTACCTTCTGACCAATCAGGCACTTGCCATTTAGTAGCTGAGT  736

seq1  TATGGGAGAAGATTCTTAGTAGGCACTGTCATTCCTGCACAGGATCTTGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGAGAAGATTCTTAGTAGGCACTGTCATTCCTGCACAGGATCTTGG  786

seq1  TTACCAGCTCTGCTGTGAGGCACCAACAGCACCCGCCCCTCTACAGAACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGCTCTGCTGTGAGGCACCAACAGCACCCGCCCCTCTACAGAACA  836

seq1  CAGTGAGCTCTGTGCTGTGATCTCCAAGACCTTAAACACAAAGTAAAATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGCTCTGTGCTGTGATCTCCAAGACCTTAAACACAAAGTAAAATA  886

seq1  GAATAGGAAAACACACCTAATATCCCATCAACAAATGTTTTCTAAGCATG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGAAAACACACCTAATATCCCATCAACAAATGTTTTCTAAGCATG  936

seq1  GTGGGACACTATAGGGGTGATTTCCTGCCTAGACATCCTGCCTAGTTTGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGACACTATAGGGGTGATTTCCTGCCTAGACATCCTGCCTAGTTTGA  986

seq1  CCTAGTTAAATTATCTACCCATTCTCTAATCTGTAGATTATATTCATTCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTTAAATTATCTACCCATTCTCTAATCTGTAGATTATATTCATTCT  1036

seq1  TGGGTGTTGATATCTAAAGTTGTATTTTCTCTCTCTGAATTCTTATTTCC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTTGATATCTAAAGTTGTATTTTCTCTCTCTGAATTCTTATTTCC  1086

seq1  ACATCTAGATCTTAGCAACATTCATATTTGTTTGTATCTGGTACAGAAAA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAGATCTTAGCAACATTCATATTTGTTTGTATCTGGTACAGAAAA  1136

seq1  CACTTTCAGGGTGCATTGGTTGAATTC  1175
      |||||||||||||||||||||||||||
seq2  CACTTTCAGGGTGCATTGGTTGAATTC  1163