BAC Information

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BAC

Clone NameB6Ng01-019N18
Chromosome18 (Build37)
Map Location 22,591,608 - 22,592,625
singlet/doubletsinglet
Overlap geneAsxl3
Upstream geneLOC225264, Klhl14, 4921528I01Rik, LOC546708, LOC100040547
Downstream geneNol4, LOC100040579, LOC665797, Dtna
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-019N18.bB6Ng01-019N18.g
ACCDH852824DH852825
length1,1851,019
definitionDH852824|Mus musculus domesticus DNA, BAC clone: B6Ng01-019N18, 5' end.DH852825|Mus musculus domesticus DNA, BAC clone: B6Ng01-019N18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactggggaataccaaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacacccgtcagaatggctaaggtaaaaaattcaggtgacagc
agatgctgatgaggatgtggagaaagaggaacactcccccattgttggtg
ggtttgcaagctggtgaaaccactctggaaatcagttcggttgttcctca
gaaaattggacatagtactactagaagatccagcaatacctctcctgggc
atataaccagaagatgttccaacttgaaacaagaacacatgctccactat
gttcagccttatttataatagccaaaagctggaaagtacccagatgtccc
tcaacagaggaatgaatgcagaaaatgtggtacattaacaatggagtact
actcagctattacaaacaatgaatttatgaaattcttaggtaaatggatg
gatctggaggatatcatcctgagtgaagtaacccaatatcaaaagaacac
acatggtatgcactcactgataagtggatattagtccagaaacttagaat
acccaagatacaatttgcaaaatacatgaaattcaagaagaaggaagacc
aaagtgtggatactttgttccttcttagaatgggtaacaaaatacccatg
gaaggagttacagaaacaaagttcagagctgacaaggaaggaaggaccat
ccagagactgccccacccagggatccatcccatatacaaccaccaaaccc
agacaccattgcatatgctagaaagttttgctgacaggaccctgatatag
ctctcacttgtgaggctatgccagtgcctacaaatacagaagtggatgct
cacagtcatctcttggatggaacatggggccctaatgaaggagctagtga
aagtacccaagagataaagggatctgtacactataggaggaccaacaata
tgaactaaccagttactctccagagctggtgtctcctagttgctatgtag
cagaagtatggcctagttgggccttaattggaggagagcccctggtcctg
tgaagatcatatgcctctagtacaggggaatgccaggcaaggaagcagaa
gggttaggttgggaatcaggccaggagaggggtgt
gaattcatggaggcccaggatgaatttctctttctatgggctaagatctc
tgattcttgctatcaactcaagataactgttttgtcaaacaatttatctg
ttctgcagatagcaatgtgttctgtccactttgtcagatgtgtgctttcc
tttggcttgtcgcacatggaaagttttatttccaaacactgctgctgaga
actgatatctttctgaagtgagtgatccagaagcacagagtccactgctc
tgtgacccatgtgtttgggagttcctccttcagccctctcccagctagga
ggctctgggcagggatacagagaagaccctgctatcctcacactagagga
aggagtgagatttgcagaagcaaagtgaggagaaagtagcaagacaagtc
acagaatggaggcatatgtcaaaggcaggaggcaagaggaagtttcatgg
aagaaaataacttgagaacatattgtcaaagctcaaaacaaggcttttta
agggcactgggtacaagataagtcaagactattttccaagtgatggcaac
ttgggggtggaggttctgaacagactttttaagaaaactacagaatagag
actgttcagttatcaataaccaaaacatacccccaataaaagaaataaat
agttactgcaaaatggatagagtctttacataatatttgcttttggaaag
actttagcacatttcacctacaaatgaacatgtaattcatttggaaattt
ttgtttaaatcagtgttaagttttgttttaatacagaaagtaatttggaa
gccaaaatgaacatatttagcaaaatgttaattactgttaattatttttc
tagaattttacatatggggatctcagctctaacagtttgattattgtaag
gagggaaaagcattatcttggtataggaagaagaaaagtagagcccagaa
tgctaagaaagtcacacagttgttacagacatgacctcaccactgggaat
cctaggcttgccacagtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_22591608_22592625
seq2: B6Ng01-019N18.g_70_1087 (reverse)

seq1  GACTGT-GCTAGCCTGGGATCCCCAGT-GTGAGGTCATTGTCTGTAAC-A  47
      |||||| || ||||| |||| |||||| ||||||||| |||||||||| |
seq2  GACTGTGGCAAGCCTAGGATTCCCAGTGGTGAGGTCA-TGTCTGTAACAA  49

seq1  CTGTGTGACTTTCTTAGCCTTTCTGGGCTCTACTTTTCTTTCTTCCTTAT  97
      ||||||||||||||||| | |||||||||||||||||| ||||||| |||
seq2  CTGTGTGACTTTCTTAG-CATTCTGGGCTCTACTTTTC-TTCTTCC-TAT  96

seq1  ACCAAGATAATGCTTTTCCCTCCTTACAATAATCAAACTGTTAGAGCTGA  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGATAATGCTTTTCCCTCCTTACAATAATCAAACTGTTAGAGCTGA  146

seq1  GAT-CCCATATGTAAAATTTCTAGAAAAATAATTAACAGTAATTAACATT  196
      ||| ||||||||||||| |||||||||||||||||||||||||||||| |
seq2  GATCCCCATATGTAAAA-TTCTAGAAAAATAATTAACAGTAATTAACA-T  194

seq1  TTTGCTAAATATGTTCATTTTGGCTTCCAAATTACTTTCTGTATTAAAAC  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTAAATATGTTCATTTTGGCTTCCAAATTACTTTCTGTATTAAAAC  244

seq1  AAAACTTAACACTGATTTAAACAAAAATTTCC-AATGAATTACATGTTCA  295
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AAAACTTAACACTGATTTAAACAAAAATTTCCAAATGAATTACATGTTCA  294

seq1  TTTGTAGGTGAAATGTGCTAAAGTCTTTCC-AAAGCAAATATTATGTAAA  344
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTGTAGGTGAAATGTGCTAAAGTCTTTCCAAAAGCAAATATTATGTAAA  344

seq1  GACTCTATCCATTTTGCAGTAACTATTTATTTCTTTTATTGGGGGTATGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTATCCATTTTGCAGTAACTATTTATTTCTTTTATTGGGGGTATGT  394

seq1  TTTGGTTATTGATAACTGAACAGTCTCTATTCTGTAGTTTTCTTAAAAAG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTATTGATAACTGAACAGTCTCTATTCTGTAGTTTTCTTAAAAAG  444

seq1  TCTGTTCAGAACCTCCACCCCCAAGTTGCCATCACTTGGAAAATAGTCTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTCAGAACCTCCACCCCCAAGTTGCCATCACTTGGAAAATAGTCTT  494

seq1  GACTTATCTTGTACCCAGTGCCCTTAAAAAGCCTTGTTTTGAGCTTTGAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATCTTGTACCCAGTGCCCTTAAAAAGCCTTGTTTTGAGCTTTGAC  544

seq1  AATATGTTCTCAAGTTATTTTCTTCCATGAAACTTCCTCTTGCCTCCTGC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTCTCAAGTTATTTTCTTCCATGAAACTTCCTCTTGCCTCCTGC  594

seq1  CTTTGACATATGCCTCCATTCTGTGACTTGTCTTGCTACTTTCTCCTCAC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACATATGCCTCCATTCTGTGACTTGTCTTGCTACTTTCTCCTCAC  644

seq1  TTTGCTTCTGCAAATCTCACTCCTTCCTCTAGTGTGAGGATAGCAGGGTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTCTGCAAATCTCACTCCTTCCTCTAGTGTGAGGATAGCAGGGTC  694

seq1  TTCTCTGTATCCCTGCCCAGAGCCTCCTAGCTGGGAGAGGGCTGAAGGAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTATCCCTGCCCAGAGCCTCCTAGCTGGGAGAGGGCTGAAGGAG  744

seq1  GAACTCCCAAACACATGGGTCACAGAGCAGTGGACTCTGTGCTTCTGGAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCCAAACACATGGGTCACAGAGCAGTGGACTCTGTGCTTCTGGAT  794

seq1  CACTCACTTCAGAAAGATATCAGTTCTCAGCAGCAGTGTTTGGAAATAAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACTTCAGAAAGATATCAGTTCTCAGCAGCAGTGTTTGGAAATAAA  844

seq1  ACTTTCCATGTGCGACAAGCCAAAGGAAAGCACACATCTGACAAAGTGGA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCATGTGCGACAAGCCAAAGGAAAGCACACATCTGACAAAGTGGA  894

seq1  CAGAACACATTGCTATCTGCAGAACAGATAAATTGTTTGACAAAACAGTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACACATTGCTATCTGCAGAACAGATAAATTGTTTGACAAAACAGTT  944

seq1  ATCTTGAGTTGATAGCAAGAATCAGAGATCTTAGCCCATAGAAAGAGAAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGAGTTGATAGCAAGAATCAGAGATCTTAGCCCATAGAAAGAGAAA  994

seq1  TTCATCCTGGGCCTCCATGAATTC  1018
      ||||||||||||||||||||||||
seq2  TTCATCCTGGGCCTCCATGAATTC  1018