BAC Information

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BAC

Clone NameB6Ng01-024G02
Chromosome18 (Build37)
Map Location 26,398,135 - 26,554,428
singlet/doubletdoublet
Overlap genenone
Upstream geneAW554918, Brunol4, LOC100041241, LOC665916, LOC100041263, LOC100041274
Downstream geneEG665977
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024G02.bB6Ng01-024G02.g
ACCDH856033DH856034
length5901,112
definitionDH856033|Mus musculus domesticus DNA, BAC clone: B6Ng01-024G02, 5' end.DH856034|Mus musculus domesticus DNA, BAC clone: B6Ng01-024G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,398,135 - 26,398,732)(26,553,322 - 26,554,428)
sequence
agtactcatgtaaataattggattctttgggatacacctacatttcatgt
gctagaagaagcagagaaaggagaatccttgaagcttcctggccaggcta
accagattggtagactaaaaattcaatgagtgactatttttaaaacagag
atgaaaagaaattaaagatgatatctgactttaatctctggcctccatac
aggtttgtacacacatgaacatacacaacaccacacacacacacacacac
acacacacacacacacacacacacacacacaaactccaaaacagattatc
agtgtgtatggtatgtgtgcatatgtgtacgtttgtgcatatatatgtat
atatatatatatatatatatatatatatatatatatatatacacacacaa
acatatatatggagtgtgtatgtatgtgtttttgtgtaggggcacattgt
ttgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtatgtgtgtgcgtgtgtgtggggggaaatgtacccaa
aagcttttacctgaaactgttgatgtctcataatcaaata
gaattcttcttggtcatacacagcccagtaagagctttgtgatgttttta
tttctgattggatacttatttctttgagagaaaaagcaccacacacaggt
acacgcctatgtatagaacagctgctcaaaatatcttcattgaattgata
gaattaaactgaagtcaagaaagttctacacaggaggaggtcttaacaaa
taaagaagctgagcagcagctgttgggagttataacgttagcatcgatct
gaaggttgtttggaagcttctttcgttttattgctaatggcattaggggc
tctgcaccagataacaggcgctgacatcaagaccttaatccaggcagtct
gcagaagccttgaccttctaggagtgcagacattgatcagcacagagagg
gtggagggtcagagattgagagccatacagaactgaaaaacacaaagctg
ctgaccctctaccttagggagagccatattcagtcaagcttctgaagaga
tacgtgcagaggtggcctgtggaagagctacatcaacaccctggatcatc
tcttgaaatttaatgagacctcggcgtcttcaacatcaggccagccctat
cataggggaatcagacaaatactatgataccacattaaatctttccatgc
ttatccaatattttgtttctgcaggtgtgaagtaaaaaataaacaattgg
attttagcttttaaaaatttaagtcattggaactttaattagcttttatg
aaaaattgtctttgcccagatttcctccttagactttcctttacatggga
ccagactgtctaatttagtgattctttcttatttaattgtttttctgtgt
cagagaagctcacagaagaaggggacttcctgctatttcttttgaaatcc
cttgttattaattgtaattttctttgtcaaagtctaacatccctactaaa
tctgaaaggccttcattttaatttactaaggtaataagagtacacagggt
tgaggaatattcccaaagagagattgtcattggattaatattatttctaa
gaaaccagaccatggaaaaggtagaaatctaatctgaatgtctatgcagt
tgtttgcatgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_26398135_26398732
seq2: B6Ng01-024G02.b_46_641

seq1  GAATTCAGTACTCATGTAAATAATTGGATTCTGTGGGATACACCTACATT  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAATTCAGTACTCATGTAAATAATTGGATTCTTTGGGATACACCTACATT  50

seq1  TCATGTGCTAGAAGAAGCAGAGAAAGGAGAATCCTTGAAGCTTCCTGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGCTAGAAGAAGCAGAGAAAGGAGAATCCTTGAAGCTTCCTGGCC  100

seq1  AGGCTAACCAGATTGGTAGACTAAAAATTCAATGAGTGACTATTTTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAACCAGATTGGTAGACTAAAAATTCAATGAGTGACTATTTTTAAA  150

seq1  ACAGAGATGAAAAGAAATTAAAGATGATATCTGACTTTAATCTCTGGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGATGAAAAGAAATTAAAGATGATATCTGACTTTAATCTCTGGCCT  200

seq1  CCATACAGGTTTGTACACACATGAACATACACAACACCACACACACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACAGGTTTGTACACACATGAACATACACAACACCACACACACACAC  250

seq1  ACACACACACACACACACACACACACACACACACACAAACTCCAAAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACAAACTCCAAAACAG  300

seq1  ATTATCAGTGTGTATGGTATGTGTGCATATGTGTACGTTTGTGCATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCAGTGTGTATGGTATGTGTGCATATGTGTACGTTTGTGCATATAT  350

seq1  ATGTATATATATATATATATATATATATATATATATATATATATATATAC  400
      |||  |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATG--TATATATATATATATATATATATATATATATATATATATATATAC  398

seq1  ACACACAAACATTTATATGGTGTGTGTATGTATGTGTTTTTGTGTAGGTG  450
      |||||||||||| ||||||| ||||||||||||||||||||||||||| |
seq2  ACACACAAACATATATATGGAGTGTGTATGTATGTGTTTTTGTGTAGGGG  448

seq1  CACATGAGTAGAGATTCTGAAACTGAATGCACATTTTACACAAAGCTGGG  500
      |||||   | |||  | ||    ||  ||    | |        | || |
seq2  CACATTGTTTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG-TGTG  497

seq1  GCACTTACTTTCACAACTTG-GAAGATGCTAACATTTCTGCAGTGTGAAA  549
          |   | |       || | |  ||    | | | ||  | | ||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGCGTGTGTGTGGGGGGAAA  547

seq1  TAGACCCAAAATCTTTTACCTGAAACTGTTGATGCCACATAATCAAATA  598
      |  |||||||| |||||||||||||||||||||| | ||||||||||||
seq2  TGTACCCAAAAGCTTTTACCTGAAACTGTTGATGTCTCATAATCAAATA  596

seq1: chr18_26553322_26554428
seq2: B6Ng01-024G02.g_70_1181 (reverse)

seq1  TTCATGC-AACAACTGCAATAGACATTCAGATTAGATTTCTACTTTTTCC  49
      ||||||| ||||||||| ||||||||||||||||||||||||| ||||||
seq2  TTCATGCAAACAACTGC-ATAGACATTCAGATTAGATTTCTACCTTTTCC  49

seq1  ATGGTCTTGGTTTCTTAGAAATAATATTTAT-CAATGACATTCTCTCTTT  98
      |||||| ||||||||||||||||||||| || |||||||| |||||||||
seq2  ATGGTC-TGGTTTCTTAGAAATAATATTAATCCAATGACAATCTCTCTTT  98

seq1  GGGAATAATTCCTCAA-CCTGTGTACTC-TATTACCTTAGTAAATTAAAA  146
      |||||| ||||||||| ||||||||||| |||||||||||||||||||||
seq2  GGGAAT-ATTCCTCAACCCTGTGTACTCTTATTACCTTAGTAAATTAAAA  147

seq1  TGAAGGCCTTTCAGATTTAGTAGGGATGTTAGACTTTGACAAAGAAAATT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCCTTTCAGATTTAGTAGGGATGTTAGACTTTGACAAAGAAAATT  197

seq1  ACAATTAATAAC-AGGGATCTCAAAAGAAATAGCAGGAAGTCCCCTTCTT  245
      |||||||||||| |||||| ||||||||||||||||||||||||||||||
seq2  ACAATTAATAACAAGGGATTTCAAAAGAAATAGCAGGAAGTCCCCTTCTT  247

seq1  CTGTGAGCTTCTCTGACACAGAAAAACAATT-AATAAGAAAGAATCACTA  294
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTGTGAGCTTCTCTGACACAGAAAAACAATTAAATAAGAAAGAATCACTA  297

seq1  AATTAGACAGTCTGGT-CCATGTAAAGGAAAGTCTAAGGAGGAAATCTGG  343
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATTAGACAGTCTGGTCCCATGTAAAGGAAAGTCTAAGGAGGAAATCTGG  347

seq1  GCAAAGACAATTTTTCATAAAAGCTAATT-AAGTTCCAATGACTTAAATT  392
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCAAAGACAATTTTTCATAAAAGCTAATTAAAGTTCCAATGACTTAAATT  397

seq1  TTTAAAAGCTAAAATCCAATTGTTTATTTTTTACTTCACACCTGCAGAAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGCTAAAATCCAATTGTTTATTTTTTACTTCACACCTGCAGAAA  447

seq1  CAAAATATTGGATAAGCATGGAAAGATTTAATGTGGTATCATAGTATTTG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATATTGGATAAGCATGGAAAGATTTAATGTGGTATCATAGTATTTG  497

seq1  TCTGATTCCCCTATGATAGGGCTGGCCTGATGTTGAAGACGCCGAGGTCT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTCCCCTATGATAGGGCTGGCCTGATGTTGAAGACGCCGAGGTCT  547

seq1  CATTAAATTTCAAGAGATGATCCAGGGTGTTGATGTAGCTCTTCCACAGG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAATTTCAAGAGATGATCCAGGGTGTTGATGTAGCTCTTCCACAGG  597

seq1  CCACCTCTGCACGTATCTCTTCAGAAGCTTGACTGAATATGGCTCTCCCT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTCTGCACGTATCTCTTCAGAAGCTTGACTGAATATGGCTCTCCCT  647

seq1  AAGGTAGAGGGTCAGCAGCTTTGTGTTTTTCAGTTCTGTATGGCTCTCAA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTAGAGGGTCAGCAGCTTTGTGTTTTTCAGTTCTGTATGGCTCTCAA  697

seq1  TCTCTGACCCTCCACCCTCTCTGTGCTGATCAATGTCTGCACTCCTAGAA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGACCCTCCACCCTCTCTGTGCTGATCAATGTCTGCACTCCTAGAA  747

seq1  GGTCAAGGCTTCTGCAGACTGCCTGGATTAAGGTCTTGATGTCAGCGCCT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAAGGCTTCTGCAGACTGCCTGGATTAAGGTCTTGATGTCAGCGCCT  797

seq1  GTTATCTGGTGCAGAGCCCCTAATGCCATTAGCAATAAAACGAAAGAAGC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTGGTGCAGAGCCCCTAATGCCATTAGCAATAAAACGAAAGAAGC  847

seq1  TTCCAAACAACCTTCAGATCGATGCTAACGTTATAACTCCCAACAGCTGC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAACAACCTTCAGATCGATGCTAACGTTATAACTCCCAACAGCTGC  897

seq1  TGCTCAGCTTCTTTATTTGTTAAGACCTCCTCCTGTGTAGAACTTTCTTG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGCTTCTTTATTTGTTAAGACCTCCTCCTGTGTAGAACTTTCTTG  947

seq1  ACTTCAGTTTAATTCTATCAATTCAATGAAGATATTTTGAGCAGCTGTTC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGTTTAATTCTATCAATTCAATGAAGATATTTTGAGCAGCTGTTC  997

seq1  TATACATAGGCGTGTACCTGTGTGTGGTGCTTTTTCTCTCAAAGAAATAA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATAGGCGTGTACCTGTGTGTGGTGCTTTTTCTCTCAAAGAAATAA  1047

seq1  GTATCCAATCAGAAATAAAAACATCACAAAGCTCTTACTGGGCTGTGTAT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCAATCAGAAATAAAAACATCACAAAGCTCTTACTGGGCTGTGTAT  1097

seq1  GACCAAGAAGAATTC  1107
      |||||||||||||||
seq2  GACCAAGAAGAATTC  1112