BAC Information

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BAC

Clone NameB6Ng01-025F23
Chromosome18 (Build37)
Map Location 28,858,896 - 28,860,057
singlet/doubletsinglet
Overlap genenone
Upstream geneEG271505, EG625997
Downstream geneBC051408, LOC100040930, 4930578E11Rik, LOC666073
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025F23.bB6Ng01-025F23.g
ACCDH856743DH856744
length1,1501,142
definitionDH856743|Mus musculus domesticus DNA, BAC clone: B6Ng01-025F23, 5' end.DH856744|Mus musculus domesticus DNA, BAC clone: B6Ng01-025F23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttacaaaattttcatgtttatataaaaagttttcataatgtctt
gcctatttgggattacaaatcagtgaagcatttggaatagctggatttaa
aacaattatatattctgttaaatgattgactatagtcccaattacatttt
ataaaataatattggaggcacactgcacagtacaccagaagtgtaacaat
ttggtatactttctgtgccaatattactgcagattttctcttgcttctct
ttctcatccttgtttattcatattattcgatcctctgccttcccctaagt
gtatattactataatttttctttttcttaggacatataaaccctactctt
actggtcaaaattatattttagtttatacatgaaaaaattaacataacac
atcatgtaacaatattcttttaaacgcactttgtttgacattgggaagaa
aaaagtaggtaggagggaggaatgaaagaaggaaggaaggaagaaaagga
agaaaaaagaaggaagatagaatgaaagaaagaaagaaagaaagaaagaa
agaaaggaaggaagaaagaaagagcctgaaagactaaaagaaagactgaa
agaaaggagaaaaagcaaggaagaacagagaaagagaaaaacaaaaaaag
aaagagaaggttagctttttaaaaaacctgtccaaacactgagaaaatat
gaagcacacaagaagtggcctaaaagtaatgaaagctgttgaaccaacaa
gaaagccattttgcagagacactctgcctcttcaaaaaaaaaaaaaaaaa
aaaaaaaaaagccaactaacaaacaacatcaacaacaacaacaaactctt
tgcaatgtattcagcctgatcaaggcatctcagatgaaaaatgaagtgaa
aattacagctgtacaaatgccacttgctgtgaactaagtcatctagattg
ctgcatatacacacccagttcctggcttcctggtgtgagaaaatcctaca
tttcaggattttttttctataagcaacacatcctgtttttcatttcatct
tcactttcacatcggagattatagaaacaagatcaaatattcagcaaact
tgtattttgtactgagaagtacagattttgttcttatcatttctactaac

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacatgtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
ccccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaaggagttacagagacggagcttggagctgagatg
aaaggatggaccatgtagagactgccatagccaggatccaccccataatc
agcatccaaacgctgacacattgcatacactagcaagattttattgaaag
gacgcagatgtagctgtctcttgtgagactatgccgggcccagcaaacac
agagtggatgctcacagtcagctaatgatggatcataggctccaatggag
agctagagaaagtacctaatgagctaatggatctgcacctataggtgaac
acatatgactaacagtaccccgagcttgactctagctgcatattatcaaa
gatggctagtcgcatcctgtaagaagcattgactgcacttatgcccattc
agtatacatgcatatgtattgtcggcaggtaatgggctggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_28858896_28860057
seq2: B6Ng01-025F23.b_45_1194 (reverse)

seq1  GTTAG--GAAATGATAAGAACAAAATCTGTACCTCTTCAGTAC-AAATAC  47
      |||||  ||||||||||||||||||||||||| || ||||||| ||||||
seq2  GTTAGTAGAAATGATAAGAACAAAATCTGTACTTC-TCAGTACAAAATAC  49

seq1  AATGTTTTGCTGAATATTTTGATCTTTGTTTCTATTAATCTCTGGATGTG  97
      ||   ||||||||||| ||||||| ||||||||| |||||||  ||||||
seq2  AA--GTTTGCTGAATA-TTTGATC-TTGTTTCTA-TAATCTC-CGATGTG  93

seq1  AAAGTGAAGATGAAATGGAGAACAGGATGTGTTTGCTTTAATAGAAAAAA  147
      ||||||||||||||||| | ||||||||||| ||||||  |||| |||||
seq2  AAAGTGAAGATGAAATGAAAAACAGGATGTG-TTGCTT--ATAG-AAAAA  139

seq1  AAATCCTGAAATTGTAGGATTTTCTCACACCAGGAAGCCAGGAACTGGGT  197
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGAAA-TGTAGGATTTTCTCACACCAGGAAGCCAGGAACTGGGT  188

seq1  GTGTATATGCAGCAATCTAGATGACTTAGTTCACAGCAAGTGGCATTTGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATATGCAGCAATCTAGATGACTTAGTTCACAGCAAGTGGCATTTGT  238

seq1  ACAGCTGTAATTTTCACTTCATTTTTCATCTGAGATGCCTTGATCAGGCT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTGTAATTTTCACTTCATTTTTCATCTGAGATGCCTTGATCAGGCT  288

seq1  GAATACATTGCAAAGAGTTTGTTGTTGTTGTTGATGTTGTTTGTTAGTTG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACATTGCAAAGAGTTTGTTGTTGTTGTTGATGTTGTTTGTTAGTTG  338

seq1  GCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGAGGCAGAGTGTCTC  397
      ||   |||||||||||||||||||||||||||||||||||||||||||||
seq2  GC---TTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGAGGCAGAGTGTCTC  385

seq1  TGCAAAATGGCTTTCTTGTTGGTTCAACAGCTTTCATTACTTTTAGGCCA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATGGCTTTCTTGTTGGTTCAACAGCTTTCATTACTTTTAGGCCA  435

seq1  CTTCTTGTGTGCTTCATATTTTCTCAGTGTTTGGACAGGTTTTTTAAAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGTGTGCTTCATATTTTCTCAGTGTTTGGACAGGTTTTTTAAAAA  485

seq1  GCTAACCTTCTCTTTCTTTTTTTGTTTTTCTCTTTCTCTGTTCTTCCTTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACCTTCTCTTTCTTTTTTTGTTTTTCTCTTTCTCTGTTCTTCCTTG  535

seq1  CTTTTTCTCCTTTCTTTCAGTCTTTCTTTTAGTCTTTCAGGCTCTTTCTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTCCTTTCTTTCAGTCTTTCTTTTAGTCTTTCAGGCTCTTTCTT  585

seq1  TCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTCTATC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCATTCTATC  635

seq1  TTCCTTCTTTTTTCTTCCTTTTCTTCCTTCCTTCCTTCTTTCATTCCTCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTTTTTTCTTCCTTTTCTTCCTTCCTTCCTTCTTTCATTCCTCC  685

seq1  CTCCTACCTACTTTTTTCTTCCCAATGTCAAACAAAGTGCGTTTAAAAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACCTACTTTTTTCTTCCCAATGTCAAACAAAGTGCGTTTAAAAGA  735

seq1  ATATTGTTACATGATGTGTTATGTTAATTTTTTCATGTATAAACTAAAAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTTACATGATGTGTTATGTTAATTTTTTCATGTATAAACTAAAAT  785

seq1  ATAATTTTGACCAGTAAGAGTAGGGTTTATATGTCCTAAGAAAAAGAAAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTGACCAGTAAGAGTAGGGTTTATATGTCCTAAGAAAAAGAAAA  835

seq1  ATTATAGTAATATACACTTAGGGGAAGGCAGAGGATCGAATAATATGAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGTAATATACACTTAGGGGAAGGCAGAGGATCGAATAATATGAAT  885

seq1  AAACAAGGATGAGAAAGAGAAGCAAGAGAAAATCTGCAGTAATATTGGCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGGATGAGAAAGAGAAGCAAGAGAAAATCTGCAGTAATATTGGCA  935

seq1  CAGAAAGTATACCAAATTGTTACACTTCTGGTGTACTGTGCAGTGTGCCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGTATACCAAATTGTTACACTTCTGGTGTACTGTGCAGTGTGCCT  985

seq1  CCAATATTATTTTATAAAATGTAATTGGGACTATAGTCAATCATTTAACA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATTATTTTATAAAATGTAATTGGGACTATAGTCAATCATTTAACA  1035

seq1  GAATATATAATTGTTTTAAATCCAGCTATTCCAAATGCTTCACTGATTTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATATAATTGTTTTAAATCCAGCTATTCCAAATGCTTCACTGATTTG  1085

seq1  TAATCCCAAATAGGCAAGACATTATGAAAACTTTTTATATAAACATGAAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAAATAGGCAAGACATTATGAAAACTTTTTATATAAACATGAAA  1135

seq1  ATTTTGTAAGAATTC  1162
      |||||||||||||||
seq2  ATTTTGTAAGAATTC  1150