BAC Information

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BAC

Clone NameB6Ng01-027K07
Chromosome18 (Build37)
Map Location 84,914,478 - 85,026,947
singlet/doubletdoublet
Overlap geneCyb5
Upstream geneTshz1, Zadh2, LOC669856, Zfp407, Cndp1, EG640234, Cndp2, LOC100039711, LOC100039725, B230399E16Rik
Downstream geneFbxo15, 1700034H14Rik, LOC100039765, LOC665382, LOC545269
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027K07.bB6Ng01-027K07.g
ACCDH858333DH858334
length886980
definitionDH858333|Mus musculus domesticus DNA, BAC clone: B6Ng01-027K07, 5' end.DH858334|Mus musculus domesticus DNA, BAC clone: B6Ng01-027K07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,026,060 - 85,026,947)(84,914,478 - 84,915,469)
sequence
gaattcacacgttaaaggtgcccagcatccctctgtccatttctgtttct
gatggaaacacacacccgcatcacttagcgggggtgagtaaatcagaagc
aagtttcttggtcactgagagacctgaaaagactcaaggagagagaaaaa
aacaaaacaaaacaacaacaaaaacagaaaacaaaaaacctaatctctag
catgtgagcccttgcaagtgacaacgaggaccatgacccccaagtacatc
attgagacttatggaaatcaaatgtaaaagaacacgatgtttcaccacaa
ggatctattgtaagtaaccaaggtagactaagcacaaaccacgcaagagg
gaagtggcctgtatgataaaaaaacacctgcataacacgatgcagccagg
agggaggtgagctctaaggtgcatcctcaacagagttgagtggggaaagt
ggccggtgacagagagcacgagaacagccacgagcaagcgcagcacatgc
tcgcactcgtggcactgactggaggacacttgccaggctgttctgtgtgg
tattcaattctgggcaactgtaattttcttctcactcttgtgtgtccccc
aggtcctcacagtaatggtggattcttcccccatacccaacaagcagtga
agtttatatttaaaagttctagaagtgagatgatttcccattgcatgtga
cacatcttcggagaaaaatcatatttctggtgaatatttgaattctgagt
agtttaaaagtctagaagtgagatgatttcccattgcatgtgagacatct
tccgagaaaaatcatatttctggtgaatatttgaattctggttagtttct
ttgctggcaaacataattattatcagttaaaacaat
gaattcaggtcctaaggctcactcagcaatcggtctatcagcggagtcat
cttcacagccatcatggggtccatgaaacaggagtctagcgtggatatgg
ctcacgttttcttgcacttcgccttccgagtaacttctgaccatctcttg
tcagcaaggaagaggaggtgaatgaagtggctaagaagtaagtgcctttt
gtttcctcggtttagcgaatgttgaccacctgcccaaccagaagatgatg
ctgtgtcactcagcttccagtccttgtgacaagagctctcaagggacaga
aaggcttgtgttggcttcttgcctggaggttttaattaatccatgcttgg
tgggcgtggttgcctgtgttgtggagggagcagaaggcagaggaaagctg
catgagggctaggaagtgggagagatggaaggttcccatgtatctgtcaa
gggtgtgtgctcggtgacctttctccataactagtaccacctgtggctgg
catttccgacccctcccaggagcatagtcagctgagaatcaagcctttag
cccatgagctttgaggggactttacagatctgagccacgaaaagtagctt
tgatggcttccttttgaaatgctgtactaaaggtctgtctgcctcccagg
ctgtgtccttgctttgcacgtctggttttcagttttgggtaagtaaacaa
gcccctgaacaactgttctacctttcggacttacagcccacctggaagac
actttatagctgatgccaaggtcctgctccctgtacttttcagggtgagt
gtttcttactctctaacaattgctgaagctgagcttcatagattgctaca
gaagagcttgtgagactgctcagctgtaaaggcacatgcaacaagcctgc
ctacaggtttgatcctggaacacctgaaactccctttgatgtgcaaccct
ccaaatgacagctcttaggaacaacctgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_85026060_85026947
seq2: B6Ng01-027K07.b_45_930 (reverse)

seq1  ATTGGTTTAATTGATAATAATTATGTTTGCCAGCAAAAGAAACTACCCAG  50
      |||| ||||| ||||||||||||||||||||||| |||||||||| ||||
seq2  ATTGTTTTAACTGATAATAATTATGTTTGCCAGC-AAAGAAACTAACCAG  49

seq1  AATTCAAATATTCACCAGAAATATGATTTTTCTCGGAAGATGTCTCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAAATATTCACCAGAAATATGATTTTTCTCGGAAGATGTCTCACAT  99

seq1  GCAATGGGAAATCATCTCACTTCTAGAACTTTTAAACTACTCAGAATTCA  150
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCAATGGGAAATCATCTCACTTCTAG-ACTTTTAAACTACTCAGAATTCA  148

seq1  AATATTCACCAGAAATATGATTTTTCTCCGAAGATGTGTCACATGCAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCACCAGAAATATGATTTTTCTCCGAAGATGTGTCACATGCAATG  198

seq1  GGAAATCATCTCACTTCTAGAACTTTTAAATATAAACTTCACTGCTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATCATCTCACTTCTAGAACTTTTAAATATAAACTTCACTGCTTGTT  248

seq1  GGGTATGGGGGAAGAATCCACCATTACTGTGAGGACCTGGGGGACACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATGGGGGAAGAATCCACCATTACTGTGAGGACCTGGGGGACACACA  298

seq1  AGAGTGAGAAGAAAATTACAGTTGCCCAGAATTGAATACCACACAGAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGAAGAAAATTACAGTTGCCCAGAATTGAATACCACACAGAACA  348

seq1  GCCTGGCAAGTGTCCTCCAGTCAGTGCCACGAGTGCGAGCATGTGCTGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCAAGTGTCCTCCAGTCAGTGCCACGAGTGCGAGCATGTGCTGCG  398

seq1  CTTGCTCGTGGCTGTTCTCGTGCTCTCTGTCACCGGCCACTTTCCCCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCGTGGCTGTTCTCGTGCTCTCTGTCACCGGCCACTTTCCCCACT  448

seq1  CAACTCTGTTGAGGATGCACCTTAGAGCTCACCTCCCTCCTGGCTGCATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTGTTGAGGATGCACCTTAGAGCTCACCTCCCTCCTGGCTGCATC  498

seq1  GTGTTATGCAGGTGTTTTTTTATCATACAGGCCACTTCCCTCTTGCGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTATGCAGGTGTTTTTTTATCATACAGGCCACTTCCCTCTTGCGTGG  548

seq1  TTTGTGCTTAGTCTACCTTGGTTACTTACAATAGATCCTTGTGGTGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCTTAGTCTACCTTGGTTACTTACAATAGATCCTTGTGGTGAAAC  598

seq1  ATCGTGTTCTTTTACATTTGATTTCCATAAGTCTCAATGATGTACTTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTGTTCTTTTACATTTGATTTCCATAAGTCTCAATGATGTACTTGGG  648

seq1  GGTCATGGTCCTCGTTGTCACTTGCAAGGGCTCACATGCTAGAGATTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCATGGTCCTCGTTGTCACTTGCAAGGGCTCACATGCTAGAGATTAGG  698

seq1  TTTTTTGTTTTCTGTTTTTGTTGTTGTTTTGTTTTGTTTTTTTCTCTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTTCTGTTTTTGTTGTTGTTTTGTTTTGTTTTTTTCTCTCTC  748

seq1  CTTGAGTCTTTTCAGGTCTCTCAGTGACCAAGAAACTTGCTTCTGATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTCTTTTCAGGTCTCTCAGTGACCAAGAAACTTGCTTCTGATTTA  798

seq1  CTCACCCCCGCTAAGTGATGCGGGTGTGTGTTTCCATCAGAAACAGAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCCCGCTAAGTGATGCGGGTGTGTGTTTCCATCAGAAACAGAAAT  848

seq1  GGACAGAGGGATGCTGGGCACCTTTAACGTGTGAATTC  888
      ||||||||||||||||||||||||||||||||||||||
seq2  GGACAGAGGGATGCTGGGCACCTTTAACGTGTGAATTC  886

seq1: chr18_84914478_84915469
seq2: B6Ng01-027K07.g_69_1048

seq1  GAATTCAGGTCCTAAGGCTCACTCAGCAATCGGTCTATCAGCGGAGTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCCTAAGGCTCACTCAGCAATCGGTCTATCAGCGGAGTCAT  50

seq1  CTTCACAGCCATCATGGGGTCCATGAAACAGGAGTCTAGCGTGGATATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACAGCCATCATGGGGTCCATGAAACAGGAGTCTAGCGTGGATATGG  100

seq1  CTCACGTTTTCTTGCACTTCGCCTTCCGAGTAACTTCTGACCATCTCTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACGTTTTCTTGCACTTCGCCTTCCGAGTAACTTCTGACCATCTCTTG  150

seq1  TCAGCAAGGAAGAGGAGGTGAATGAAGTGGCTAAGAAGTAAGTGCCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAAGGAAGAGGAGGTGAATGAAGTGGCTAAGAAGTAAGTGCCTTTT  200

seq1  GTTTCCTCGGTTTAGCGAATGTTGACCACCTGCCCAACCAGAAGATGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTCGGTTTAGCGAATGTTGACCACCTGCCCAACCAGAAGATGATG  250

seq1  CTGTGTCACTCAGCTTCCAGTCCTTGTGACAAGAGCTCTCAAGGGACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCACTCAGCTTCCAGTCCTTGTGACAAGAGCTCTCAAGGGACAGA  300

seq1  AAGGCTTGTGTTGGCTTCTTGCCTGGAGGTTTTAATTAATCCATGCTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTGTGTTGGCTTCTTGCCTGGAGGTTTTAATTAATCCATGCTTGG  350

seq1  TGGGCGTGGTTGCCTGTGTTGTGGAGGGAGCAGAAGGCAGAGGAAAGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCGTGGTTGCCTGTGTTGTGGAGGGAGCAGAAGGCAGAGGAAAGCTG  400

seq1  CATGAGGGCTAGGAAGTGGGAGAGATGGAAGGTTCCCATGTATCTGTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGGGCTAGGAAGTGGGAGAGATGGAAGGTTCCCATGTATCTGTCAA  450

seq1  GGGTGTGTGCTCGGTGACCTTTCTCCATAACTAGTACCACCTGTGGCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTGTGCTCGGTGACCTTTCTCCATAACTAGTACCACCTGTGGCTGG  500

seq1  CATTTCCGACCCCTCCCAGGAGCATAGTCAGCTGAGAATCAAGCCTTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCGACCCCTCCCAGGAGCATAGTCAGCTGAGAATCAAGCCTTTAG  550

seq1  CCCATGAGCTTTGAGGGGACTTTACAGATCTGAGCCACGAAAAGTAGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGAGCTTTGAGGGGACTTTACAGATCTGAGCCACGAAAAGTAGCTT  600

seq1  TGATGGCTTCCTTTTGAAATGCTGTACTAAAGGTCTGTCTGCCTCCCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCTTCCTTTTGAAATGCTGTACTAAAGGTCTGTCTGCCTCCCAGG  650

seq1  CTGTGTCCTTGCTTTGCACGTCTGGTTTTCAGTTTTGGGTAAGTAAACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCCTTGCTTTGCACGTCTGGTTTTCAGTTTTGGGTAAGTAAACAA  700

seq1  GCCCCTGAACAACTGTTCTACCTTTCGGACTTACAGCCCACCTGGAAGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTGAACAACTGTTCTACCTTTCGGACTTACAGCCCACCTGGAAGAC  750

seq1  ACTTTATAGCTGATGCCAAGGTCCTGCTCCCTGTACTTTTCAGGGTGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATAGCTGATGCCAAGGTCCTGCTCCCTGTACTTTTCAGGGTGAGT  800

seq1  GTTTCTTACTCTCTAACAATTGCTGAAGCTGAGCTTCATTAGATATGCTA  850
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  GTTTCTTACTCTCTAACAATTGCTGAAGCTGAGCTTCA-TAGAT-TGCTA  848

seq1  CAGAAGAGCTGGTGAGACTGCTCAGCTGGTAAAGGCACATGCGACCAAGC  900
      |||||||||| |||||||||||||||| |||||||||||||| | |||||
seq2  CAGAAGAGCTTGTGAGACTGCTCAGCT-GTAAAGGCACATGC-AACAAGC  896

seq1  CTGCCTACAGGTTTTGATCCCTGGAACACCTGAGAACTCACTTTTGATGT  950
      ||||||||||| |||||| |||||||||||||| ||||| | ||||||||
seq2  CTGCCTACAGG-TTTGAT-CCTGGAACACCTGA-AACTC-CCTTTGATGT  942

seq1  GCAAACCCATCCAAACGACAAGCTCCTTAGGAACAACCTGAA  992
      ||||  || |||||| ||| |||| |||||||||||||||||
seq2  GCAA--CCCTCCAAATGAC-AGCT-CTTAGGAACAACCTGAA  980