BAC Information

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BAC

Clone NameB6Ng01-031K04
Chromosome18 (Build37)
Map Location 32,726,580 - 32,815,811
singlet/doubletdoublet
Overlap geneLOC100041160, LOC100041170
Upstream geneSlc25a46, Sap130, LOC640549, Ammecr1l, Polr2d, EG626327, Wdr33, Sft2d3, Lims2, Gpr17, Myo7b, Iws1, Proc, LOC546710, Map3k2, Ercc3, Bin1, Gypc
Downstream geneTslp, Wdr36, Camk4, Stard4, EG433170, D0H4S114, ENSMUSG00000073610, LOC666281, LOC100041258
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031K04.bB6Ng01-031K04.g
ACCDH861192DH861193
length1,2341,012
definitionDH861192|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K04, 5' end.DH861193|Mus musculus domesticus DNA, BAC clone: B6Ng01-031K04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,814,552 - 32,815,811)(32,726,580 - 32,727,602)
sequence
gaattccctgtgacgttaatagctgtgatgttaatagatgacccataagt
tcgaaatgtactgctgctttgctgaaaaacaaaaaaacaaaacaacaaca
acaacaacaaaaaccccataagggcaggcaaagtgagtcactaggccaaa
ggtagtcaccctatgcaaaccaaccaatgtctgcaaaggttacttgctac
accaataaaaataagccagctagtcctgttgcctaaatctgccccttact
aggtataaaaagtgtgttctttctttgttctgggtctctcctcttgcttg
catgctgagagggatccccaacatgttagatcaattaaaaaaaatccact
tgcagtttgcagcgatggcaatctctgtagtctttgtgagtgagggtctt
ttgacagactccaacataattattaaaaaacaatccacactaatgctggc
tatgcttgagtaattcagtctcccctctgcattgggagctgcaagctgca
gtcttctgtttcggttcacctgcctccaaactgcttgaactgctcatatc
ttcccagccatccaccccctgtggctagctgtcacaaatccctgtaactc
agtaaaatcaaaactatagaggcttgtaatttatcagtcagtaaattctc
aagccccaaaatgcccacacaaagaactcaaaaattccactgatataaac
acaagctgtactcctagatagggcaaattgcttattttatcctatagttc
ttgtatgctattcacagctacctgtggccatttcaagccccgtgaattca
gttcatcttcttcctccatctcctctctgtctttctgtcctgtctttaaa
ctctcagcctgccttccttttccactggccaattgcaggcttatcttttg
cctgccctgacctgcatatagacagcatccacacacttccttagaaaaaa
gccaagatcactggatgtcagtgaaaaaacaaacaaacaaacaaacaaac
atcacaatgagaatttctgaaaaaattgtcagcagagagtagcatgactg
gcaatagcctaaaacatgtcctagcagaatgttctagaagggccacatca
attgtttttacagactactctggaagaatacccttccgagacagaactcc
ctttttgtctgcatgaaatcagactacctctgtgatgcgagtgcttgcca
gaatgagagaagccttatttgtctctctatacca
gaattcagggccccccgggaagaggggctctggtcaaactccagtttctg
cgtgggctttcagatctgttagtgggcatgaatgtgctgtgtgggttctg
tggcttgttagtgggcatgaatgtgctgtgtgggctctgtggcttgttag
tgtgcatttgtatgctgcatgtacaatgactggtgaatttatacgatgga
ttatttttcctctctgtgtgtctgtgtatgtttgttggtgtgcacatata
tgtgttcatgtgtgtggaagtcagaggacaccttcagctgtcgttcttca
ggttctgtccatctgttctttgagacaaggtccttcgctgacctggaact
cactaagtcggctagactgcctgactagcaagccctggagctctgcctgt
tccacttctccagagctggtgttacggatgtgcactggcacatctgacct
ttcaaactgtgcgttctgggggtcaaactgagtttcttgtgcttgcaagg
caaacactttactgactaagccacaccccagctacagatgtgttattatt
aaggacagtctaatttacttgcagctaaatgctaagggaaagaaaagtat
cgacttgggtaatgaagttccacaggttctgataaatacagcatcatgtg
tctcctatgaaagtgtctttttttaaaaatttttttattaggtattttcc
tcaattacatttccaatgctatcccaaaagtcccccatacccccccccac
tcccctacccacccacttcccctttttggccctggcgttcccctgtactg
gggcatataaagtttgcaagtccaatgggcctctctttccagtgatggcc
gactaggccatcttttgatacatatgcagctagagtcagagctctggtac
tggttagtcataatgttgtccacctaataggatgcaaatcccttagctct
tgggtaatttctttagctcctcattgggggcctgggtcatctaaaagatg
actgtgagcatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_32814552_32815811
seq2: B6Ng01-031K04.b_39_1272 (reverse)

seq1  TGGTATAG-TAG-CAAATAAGGGCTTCT-TCATTCTTGGGCAAGCACTCT  47
      ||||||||  || ||||||| ||||||| |||||||  ||||||||||| 
seq2  TGGTATAGAGAGACAAATAA-GGCTTCTCTCATTCT--GGCAAGCACTCG  47

seq1  GACTACAGAGGTATGCTCTGATTTTCATGCAGACCAAAAAGGGAAGCTCT  97
       |  |||||||||   ||||| ||||||||||| ||||||||| || |||
seq2  CATCACAGAGGTA--GTCTGA-TTTCATGCAGA-CAAAAAGGG-AGTTCT  92

seq1  GGCTCTGGGAAGGGGTTATCTTCCAGAGTAGTCTGTGACAACTAGTTGAA  147
      |  ||| |||| ||||  |||||||||||||||||| | ||| | ||| |
seq2  G--TCTCGGAA-GGGTATTCTTCCAGAGTAGTCTGTAAAAAC-AATTG-A  137

seq1  TGTGGCCCTTCTAGAACATTCCTTGCTAGGACATGTTTTAGGCTATTGCC  197
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  TGTGGCCCTTCTAGAACATTC--TGCTAGGACATGTTTTAGGCTATTGCC  185

seq1  AGTCATGCTACTTCTCTTGCTGACAATTTTTATCAGAAATTCTCATTGTG  247
      ||||||||||| |||| |||||||||||||| ||||||||||||||||||
seq2  AGTCATGCTAC-TCTC-TGCTGACAATTTTT-TCAGAAATTCTCATTGTG  232

seq1  ATGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTTCACTGACATCCAGTG  297
      ||||||   |||||||   |||||||   |||||||||||||||||||||
seq2  ATGTTT--GTTTGTTT--GTTTGTTT--GTTTTTTCACTGACATCCAGTG  276

seq1  ATCCTTGGCTTTTTTTCTTAAGGAAGTGTGTGGATTGCTGTCTATATGCA  347
      || ||||||||||||   |||||||||||||||| |||||||||||||||
seq2  AT-CTTGGCTTTTTT--CTAAGGAAGTGTGTGGA-TGCTGTCTATATGCA  322

seq1  GGTCAGGGCAGGCAAAAGATAAGCCTGCAATTGGCCAGTGGAAAAGGAAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGGGCAGGCAAAAGATAAGCCTGCAATTGGCCAGTGGAAAAGGAAG  372

seq1  GCAGGCTGAGAGTTTTAAAGACAGGACAGAAAGACAGAGAGGAGATGGAG  447
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTGAGAG-TTTAAAGACAGGACAGAAAGACAGAGAGGAGATGGAG  421

seq1  GAAGAAGATGAACTGAATTCACGGGGCTTGAAATGGCCACAGGTAGCTGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGATGAACTGAATTCACGGGGCTTGAAATGGCCACAGGTAGCTGT  471

seq1  GAATAGCATACAAGAACTATAGGATAAAATAAGCAATTTGCCCTATCTAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCATACAAGAACTATAGGATAAAATAAGCAATTTGCCCTATCTAG  521

seq1  GAGTACAGCTTGTGTTTATATCAGTGGAATTTTTGAGTTCTTTGTGTGGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACAGCTTGTGTTTATATCAGTGGAATTTTTGAGTTCTTTGTGTGGG  571

seq1  CATTTTGGGGCTTGAGAATTTACTGACTGATAAATTACAAGCCTCTATAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGGGGCTTGAGAATTTACTGACTGATAAATTACAAGCCTCTATAG  621

seq1  TTTTGATTTTACTGAGTTACAGGGATTTGTGACAGCTAGCCACAGGGGGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTTTACTGAGTTACAGGGATTTGTGACAGCTAGCCACAGGGGGT  671

seq1  GGATGGCTGGGAAGATATGAGCAGTTCAAGCAGTTTGGAGGCAGGTGAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCTGGGAAGATATGAGCAGTTCAAGCAGTTTGGAGGCAGGTGAAC  721

seq1  CGAAACAGAAGACTGCAGCTTGCAGCTCCCAATGCAGAGGGGAGACTGAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAACAGAAGACTGCAGCTTGCAGCTCCCAATGCAGAGGGGAGACTGAA  771

seq1  TTACTCAAGCATAGCCAGCATTAGTGTGGATTGTTTTTTAATAATTATGT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCAAGCATAGCCAGCATTAGTGTGGATTGTTTTTTAATAATTATGT  821

seq1  TGGAGTCTGTCAAAAGACCCTCACTCACAAAGACTACAGAGATTGCCATC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCTGTCAAAAGACCCTCACTCACAAAGACTACAGAGATTGCCATC  871

seq1  GCTGCAAACTGCAAGTGGATTTTTTTTAATTGATCTAACATGTTGGGGAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAAACTGCAAGTGGATTTTTTTTAATTGATCTAACATGTTGGGGAT  921

seq1  CCCTCTCAGCATGCAAGCAAGAGGAGAGACCCAGAACAAAGAAAGAACAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCAGCATGCAAGCAAGAGGAGAGACCCAGAACAAAGAAAGAACAC  971

seq1  ACTTTTTATACCTAGTAAGGGGCAGATTTAGGCAACAGGACTAGCTGGCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTATACCTAGTAAGGGGCAGATTTAGGCAACAGGACTAGCTGGCT  1021

seq1  TATTTTTATTGGTGTAGCAAGTAACCTTTGCAGACATTGGTTGGTTTGCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTATTGGTGTAGCAAGTAACCTTTGCAGACATTGGTTGGTTTGCA  1071

seq1  TAGGGTGACTACCTTTGGCCTAGTGACTCACTTTGCCTGCCCTTATGGGG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTGACTACCTTTGGCCTAGTGACTCACTTTGCCTGCCCTTATGGGG  1121

seq1  TTTTTGTTGTTGTTGTTGTTGTTTTGTTTTTTTGTTTTTCAGCAAAGCAG  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTGTTGTTGTTGTTGTTTTGTTTTTTTGTTTTTCAGCAAAGCAG  1171

seq1  CAGTACATTTCGAACTTATGGGTCATCTATTAACATCACAGCTATTAACG  1247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACATTTCGAACTTATGGGTCATCTATTAACATCACAGCTATTAACG  1221

seq1  TCACAGGGAATTC  1260
      |||||||||||||
seq2  TCACAGGGAATTC  1234

seq1: chr18_32726580_32727602
seq2: B6Ng01-031K04.g_68_1079

seq1  GAATTCAGGGCCCCCCGGGAAGAGGGGCTCTGGTCAAACTCCAGTTTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGCCCCCCGGGAAGAGGGGCTCTGGTCAAACTCCAGTTTCTG  50

seq1  CGTGGGCTTTCAGATCTGTTAGTGGGCATGAATGTGCTGTGTGGGTTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGGGCTTTCAGATCTGTTAGTGGGCATGAATGTGCTGTGTGGGTTCTG  100

seq1  TGGCTTGTTAGTGGGCATGAATGTGCTGTGTGGGCTCTGTGGCTTGTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGTTAGTGGGCATGAATGTGCTGTGTGGGCTCTGTGGCTTGTTAG  150

seq1  TGTGCATTTGTATGCTGCATGTACAATGACTGGTGAATTTATACGATGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATTTGTATGCTGCATGTACAATGACTGGTGAATTTATACGATGGA  200

seq1  TTATTTTTCCTCTCTGTGTGTCTGTGTATGTTTGTTGGTGTGCACATATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTCCTCTCTGTGTGTCTGTGTATGTTTGTTGGTGTGCACATATA  250

seq1  TGTGTTCATGTGTGTGGAAGTCAGAGGACACCTTCAGCTGTCGTTCTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCATGTGTGTGGAAGTCAGAGGACACCTTCAGCTGTCGTTCTTCA  300

seq1  GGTTCTGTCCATCTGTTCTTTGAGACAAGGTCCTTCGCTGACCTGGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGTCCATCTGTTCTTTGAGACAAGGTCCTTCGCTGACCTGGAACT  350

seq1  CACTAAGTCGGCTAGACTGCCTGACTAGCAAGCCCTGGAGCTCTGCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAGTCGGCTAGACTGCCTGACTAGCAAGCCCTGGAGCTCTGCCTGT  400

seq1  TCCACTTCTCCAGAGCTGGTGTTACGGATGTGCACTGGCACATCTGACCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTCTCCAGAGCTGGTGTTACGGATGTGCACTGGCACATCTGACCT  450

seq1  TTCAAACTGTGCGTTCTGGGGGTCAAACTGAGTTTCTTGTGCTTGCAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACTGTGCGTTCTGGGGGTCAAACTGAGTTTCTTGTGCTTGCAAGG  500

seq1  CAAACACTTTACTGACTAAGCCACACCCCAGCTACAGATGTGTTATTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACTTTACTGACTAAGCCACACCCCAGCTACAGATGTGTTATTATT  550

seq1  AAGGACAGTCTAATTTACTTGCAGCTAAATGCTAAGGGAAAGAAAAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAGTCTAATTTACTTGCAGCTAAATGCTAAGGGAAAGAAAAGTAT  600

seq1  CGACTTGGGTAATGAAGTTCCACAGGTTCTGATAAATACAGCATCATGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTTGGGTAATGAAGTTCCACAGGTTCTGATAAATACAGCATCATGTG  650

seq1  TCTCCTATGAAAGTGTCTTTTTTTAAAAATTTTTTTATTAGGTATTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTATGAAAGTGTCTTTTTTTAAAAATTTTTTTATTAGGTATTTTCC  700

seq1  TCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCCCCCCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCCCCCCCAC  750

seq1  TCCCCTACCCACCCACTTCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTACCCACCCACTTCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTG  800

seq1  GGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCC  850

seq1  GACTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGG  900
      ||||||||||||||||||||||||||||||||||||| |||||||   ||
seq2  GACTAGGCCATCTTTTGATACATATGCAGCTAGAGTC-AGAGCTC--TGG  897

seq1  TACTGGTTAGTTCATAATGTTGTTCCACCTATAGGGATGCAGATCCCTTT  950
      |||||||||| ||||||||||| ||||||||   ||||||| ||||| ||
seq2  TACTGGTTAG-TCATAATGTTG-TCCACCTAATAGGATGCAAATCCC-TT  944

seq1  AGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGTTCCA  1000
      |||| |||||||| ||||| |||||||| ||||||||| |||| ||  ||
seq2  AGCT-CTTGGGTAATTTCTTTAGCTCCT-CATTGGGGG-CCTGGGT--CA  989

seq1  TCTTATAGATGACTGTGAGCATC  1023
      ||| | |||||||||||||||||
seq2  TCTAAAAGATGACTGTGAGCATC  1012