BAC Information

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BAC

Clone NameB6Ng01-031L19
Chromosome18 (Build37)
Map Location 17,522,121 - 17,523,077
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh2, LOC665519, 1700001G01Rik, 4921533I20Rik
Downstream geneLOC100040647
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031L19.bB6Ng01-031L19.g
ACCDH861267DH861268
length1,132807
definitionDH861267|Mus musculus domesticus DNA, BAC clone: B6Ng01-031L19, 5' end.DH861268|Mus musculus domesticus DNA, BAC clone: B6Ng01-031L19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagaacagatgaatctttaatgacagagaagcacttaaagaaata
ttcaaagttctcagtgatcagggaaatgcaaatcaaaatgaccctgagat
tccaccttacaacagtcagaatggctaagatcaaaagctcaggtgacagc
agatgctggcaaggatatggagaaagaggaacactcctggtgggattgca
aactggtaaaaccaatctggaaatcaatctggaggttcctcagaaaattg
taaaaagatctacctgaagatccagaaataccactcttgggcatatacct
gaaagttgccccaccatgccacaggggcatgtgttccactatgtttattg
cagtctttctttgttccagttttctcttgctctcttcctcctctacctcc
tcctctttcttctttttcttcttttttcatattcctcctttattgaatgg
gattcgttcactctgtgccatttgaggtggaggtttgtaaattcattctt
tctttctttctttctttctccctttctttcttctttcttctttcttcttt
ttaaattttctataaagggccctatagtgacagttttctcaactatcagg
aaagacattgaattttagttgaaattttagagagtatgggcaccaagtaa
gttgtaatgaataaatgtaccttataacatggccatgagtctatgcaacc
tgtgacaaagccttgtgatttcactgctaaatgtctgcaataggatcatg
tgtattaacactgatccttagtggtggtgctgcttgggtaaattgtgaaa
gatttgtaggattatggaaaaacaaaacaaaacaaaacaaaacggagtat
ctggtgctatttttgcagagtattgatgacttgggaaatgtggcctgctg
gtaaaaggggtcaactgaaagagaccttcagaaacattcctggctctggt
ccgataatgctacattctgtctgcaacatatacagacccaacctcatgat
ctgccatcccaaccaccatgccttttgcatgatagagtaaattctaggaa
acatggacaagaggaactcattctcctttaaggttgttccgttaggaatt
tgtatgctcctgaaaaaaaaaaaatgaaccca
gaattcagtgacatgctccactatgatgcccctcaacagaggaatggata
caaaaaatgtggtacatttacacaatggagtactactcagctattaaaaa
gaatgaatttatgaaattcctaggcaaatggttggacctggagggcatca
tcctgagtgaggtaacacaatcacaaaagaactcaaatgatatgtactca
ctgataagtggatattaacccagaaacttagtaagtgagatataaggtac
aatttgcaaaacacatgaaactgaagaagaatgaagaccaaagtgtggac
actttgccccttcttagaattggaaacaatcacccatggaaggagttaca
gagacaaagtttggagctgagacaaaaggatggaccatctagagactgcc
atatccagggatccatcccataattagcctccaaacgatggcaccattgc
atacactagcaagtgtttggtgcaaggaccgtgatatagccgtctcttgt
gagactaggcctgggcctagcaaacacataagtggatgctcacagtcagc
tattggatggatcacagggctcccaatggagctagagaaagtatccaagg
agctaaagggatctgcaaccctacaggtggaacaacattatgaactaacc
agtaccctggagctcttgtctctagctgcatatgtatcaaaagatggcct
agttggccatcactggaaagagacgcccactggacaggcaaactttatat
gccccagtacaggggaacgccagggccaaaaaatgggaatgggtgggtag
gggagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_17522121_17523077
seq2: B6Ng01-031L19.b_243_1178

seq1  TGCAAACTGGTAAAACCAATCTGGAAATCAATCTGGAGGTTCCTCAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACTGGTAAAACCAATCTGGAAATCAATCTGGAGGTTCCTCAGAAA  50

seq1  ATTGTAAAAAGATCTACCTGAAGATCCAGAAATACCACTCTTGGGCATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAAAAGATCTACCTGAAGATCCAGAAATACCACTCTTGGGCATAT  100

seq1  ACCTGAAAGTTGCCCCACCATGCCACAGGGGCATGTGTTCCACTATGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGAAAGTTGCCCCACCATGCCACAGGGGCATGTGTTCCACTATGTTT  150

seq1  ATTGCAGTCTTTCTTTGTTCCAGTTTTCTCTTGCTCTCTTCCTCCTCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAGTCTTTCTTTGTTCCAGTTTTCTCTTGCTCTCTTCCTCCTCTAC  200

seq1  CTCCTCCTCTTTCTTCTTTTTCTTCTTTTTTCATATTCCTCCTTTATTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTCTTTCTTCTTTTTCTTCTTTTTTCATATTCCTCCTTTATTGA  250

seq1  ATGGGATTCGTTCACTCTGTGCCATTTGAGGTGGAGGTTTGTAAATTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATTCGTTCACTCTGTGCCATTTGAGGTGGAGGTTTGTAAATTCAT  300

seq1  TCTTTCTTTCTTTCTTTCTTTCTCCCTTTCTTTCTTCTTTCTTCTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTCCCTTTCTTTCTTCTTTCTTCTTTCTT  350

seq1  CTTTTTAAATTTTCTATAAAGGGCCCTATAGTGACAGTTTTCTCAACTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAATTTTCTATAAAGGGCCCTATAGTGACAGTTTTCTCAACTAT  400

seq1  CAGGAAAGACATTGAATTTTAGTTGAAATTTTAGAGAGTATGGGCACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGACATTGAATTTTAGTTGAAATTTTAGAGAGTATGGGCACCAA  450

seq1  GTAAGTTGTAATGAATAAATGTACCTTATAACATGGCCATGAGTCTATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTTGTAATGAATAAATGTACCTTATAACATGGCCATGAGTCTATGC  500

seq1  AACCTGTGACAAAGCCTTGTGATTTCACTGCTAAATGTCTGCAATAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTGACAAAGCCTTGTGATTTCACTGCTAAATGTCTGCAATAGGAT  550

seq1  CATGTGTATTAACACTGATCCTTAGTGGTGGTGCTGCTTGGGTAAATTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTATTAACACTGATCCTTAGTGGTGGTGCTGCTTGGGTAAATTGT  600

seq1  GAAAGATTTGTAGGATTTATGGAAAAACAAAACAAAACAAAACAAAACGG  650
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GAAAGATTTGTAGGA-TTATGGAAAAACAAAACAAAACAAAACAAAACGG  649

seq1  AGTATCTGGTGCTATTTTTGCAGAGTATTGATGACTTGGGAAATGTGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCTGGTGCTATTTTTGCAGAGTATTGATGACTTGGGAAATGTGGCC  699

seq1  TGGCTGGTAAAAGGGGGTCAACTGAAAGGAGACCTTCAGAAACATTCCTG  750
      | |||||||||| |||||||||||||| ||||||||||||||||||||||
seq2  T-GCTGGTAAAA-GGGGTCAACTGAAA-GAGACCTTCAGAAACATTCCTG  746

seq1  GCTCTGGTCCGATATTGCTACATTCTGTCTGGCAAACATATACAGACCCC  800
      |||||||||||||| ||||||||||||||||   |||||||||||| |||
seq2  GCTCTGGTCCGATAATGCTACATTCTGTCTG--CAACATATACAGA-CCC  793

seq1  AACCTCATGATTCTGCCATCCCAACCACCATGCCTTTTTGCCATGATAGA  850
      |||||||||| |||||||||||||||||||||||||||   |||||||||
seq2  AACCTCATGA-TCTGCCATCCCAACCACCATGCCTTTT--GCATGATAGA  840

seq1  GTATATCCTAGGAAACCATGAACAAAGAGGAACTCATTCTCCTTT-AGGT  899
      ||| || |||||||| |||| || ||||||||||||||||||||| ||||
seq2  GTAAATTCTAGGAAA-CATGGAC-AAGAGGAACTCATTCTCCTTTAAGGT  888

seq1  TGTTTCGCTCAGGAATTTTGTTAGTGCTACCAGAAAAAAAAAAAAAAAAT  949
      |||| || | ||||| |||||   |||| || |    |||||||||||||
seq2  TGTTCCG-TTAGGAA-TTTGT--ATGCT-CCTG----AAAAAAAAAAAAT  929

seq1  GAAACCCA  957
      | ||||||
seq2  G-AACCCA  936