BAC Information

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BAC

Clone NameB6Ng01-032E20
Chromosome18 (Build37)
Map Location 4,590,626 - 4,591,835
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435549, EG664867, LOC621666, Lyzl1, LOC383374, LOC664909, Map3k8, Papd1, EG664931, LOC100039354
Downstream geneLOC433157, 9430020K01Rik, LOC268988, Svil, Zfp438, LOC100039442
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032E20.bB6Ng01-032E20.g
ACCDH861681DH861682
length1,200695
definitionDH861681|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E20, 5' end.DH861682|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttctctggaggtggatggcacctatgtgccaaggagcctcat
cccccaaccctcctcctactgactagccacgtgggtaaaataacagcctc
tattctgagctcatacatagaagcttccttctaccagaggcagattttgg
atttagaaaactcttagcaaaatcttcctgtggcttctgaagaaacagta
gattcactcggaggatcagcattctcctcaggtaaacaccccagcccagc
ccagcccagcccagcccagcccagcccagcccaaacctcatgcatgctca
ttgctttccttgttttgttgaaaagctaattatgaaaacagagtttggaa
gaagctgctgctctctagcttctcctgatgaaagggcttgtttctatttc
tctgaatgaggaataaagacacaaatcttgtgaagagaaaactgtagtgt
gttctctgtagagacagagctggttgtgtcagtcacacatagccagggta
agctttgctggcttctggctattcctctgcctggtgtgctggccctggga
ctggtcacatggctagaccttccagatatggctcctagtcactcattgaa
tatgatgaccagttctctttcccttgctgtttctctttaagcagttgggc
actacttattccatttttaaaatcttattccatttttaaatgtgaaatct
gttcttgtgtgttctatttgagtaattcttaaacttacagccctctccaa
tgatagattagagatgtgtctgaagtgtatggtaacttgtgttaacattt
tctctgaataccaaccactactttcttttgagagaaaaggatgagtcatc
tgccagatgggccatttcttctgaaaacttgccaccaccctctcccttct
tttgtaaacctctctgcctatgaatctgtcaccatgtctcactgactgaa
aacgtattcactggctcattctcattctctctctttctttccctcacttc
ttctcctctccggccacgcctctcacttgaggaaatttcattcctactag
ctgctagattcacgttcatcaatcagtgggtggcaactatctccgttcct
gctctgggctaagatgccatcccggtggcagggagaggagactctggaga
catccgccccaacctcatgactgtttatgctctgcactcactacatgcat


gaattctgttcatatggatatcttctttaggtttgttgaaagactttctt
gctttttctcgagcttagtttccctctttgtgttgaagttttccctttat
tatcctttgatgggctggatttgtgaaaagatcttgtgtaaatttagttt
tgtcatagaatactttggtttttccatcaatggtaattgagagtttttct
gagtataatagcctggactggtatttgccctcttagggtctgtatgacat
ctgcccaggatcttctgggtttcatagtctttggggagaagtcaggtgta
attctgataggtctgcctttatatgttacttgacatttttccctttctgc
ttttaatattctttctttgttttgtgcattttggtgttttgattattata
tgatgggaggaatttctgatccaacctatttggagttccttaggcttctt
gtatattcatgggcatctatttctttaggttagggaagttttcttctata
attttgttgaagatatttactggccttttaatttggaaatcttccttctc
atatatacctattatccttagttttggtcttttcattgtgtcctggattt
ctggatgttttgggttaggatcttttttgcatttcacattttctttgatt
gtttgtcaatgttttctatgatatcttctgcacctgagatcctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_4590626_4591835
seq2: B6Ng01-032E20.b_43_1242

seq1  GAATTCTGTTCTCTGGAGGTGGATGGCACCTATGTGCCAAGGAGCCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCTCTGGAGGTGGATGGCACCTATGTGCCAAGGAGCCTCAT  50

seq1  CCCCCAACCCTCCTCCTACTGACTAGCCACGTGGGTAAAATAACAGCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAACCCTCCTCCTACTGACTAGCCACGTGGGTAAAATAACAGCCTC  100

seq1  TATTCTGAGCTCATACATAGAAGCTTCCTTCTACCAGAGGCAGATTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGAGCTCATACATAGAAGCTTCCTTCTACCAGAGGCAGATTTTGG  150

seq1  ATTTAGAAAACTCTTAGCAAAATCTTCCTGTGGCTTCTGAAGAAACAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGAAAACTCTTAGCAAAATCTTCCTGTGGCTTCTGAAGAAACAGTA  200

seq1  GATTCACTCGGAGGATCAGCATTCTCCTCAGGTAAACACCCCAGCCCAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACTCGGAGGATCAGCATTCTCCTCAGGTAAACACCCCAGCCCAGC  250

seq1  CCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAAACCTCATGCATGCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCAGCCCAGCCCAGCCCAGCCCAGCCCAAACCTCATGCATGCTCA  300

seq1  TTGCTTTCCTTGTTTTGTTGAAAAGCTAATTATGAAAACAGAGTTTGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTCCTTGTTTTGTTGAAAAGCTAATTATGAAAACAGAGTTTGGAA  350

seq1  GAAGCTGCTGCTCTCTAGCTTCTCCTGATGAAAGGGCTTGTTTCTATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGCTGCTCTCTAGCTTCTCCTGATGAAAGGGCTTGTTTCTATTTC  400

seq1  TCTGAATGAGGAATAAAGACACAAATCTTGTGAAGAGAAAACTGTAGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAATGAGGAATAAAGACACAAATCTTGTGAAGAGAAAACTGTAGTGT  450

seq1  GTTCTCTGTAGAGACAGAGCTGGTTGTGTCAGTCACACATAGCCAGGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTGTAGAGACAGAGCTGGTTGTGTCAGTCACACATAGCCAGGGTA  500

seq1  AGCTTTGCTGGCTTCTGGCTATTCCTCTGCCTGGTGTGCTGGCCCTGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGCTGGCTTCTGGCTATTCCTCTGCCTGGTGTGCTGGCCCTGGGA  550

seq1  CTGGTCACATGGCTAGACCTTCCAGATATGGCTCCTAGTCACTCATTGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCACATGGCTAGACCTTCCAGATATGGCTCCTAGTCACTCATTGAA  600

seq1  TATGATGACCAGTTCTCTTTCCCTTGCTGTTTCTCTTTAAGCAGTTGGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGACCAGTTCTCTTTCCCTTGCTGTTTCTCTTTAAGCAGTTGGGC  650

seq1  ACTACTTATTCCATTTTTAAAATCTTATTCCATTTTTAAATGTGAAATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTATTCCATTTTTAAAATCTTATTCCATTTTTAAATGTGAAATCT  700

seq1  GTTCTTGTGTGTTCTATTTGAGTAATTCTTAAACTTACAGCCCTCTCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGTGTGTTCTATTTGAGTAATTCTTAAACTTACAGCCCTCTCCAA  750

seq1  TGATAGATTAGAGATGTGTCTGAAGTGTATGGTAACTTGTGTTAACATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGATTAGAGATGTGTCTGAAGTGTATGGTAACTTGTGTTAACATTT  800

seq1  TCTCTGAATACCAACCACTACTTTCTTTTGAGAGAAAAGGATGAGTCATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGAATACCAACCACTACTTTCTTTTGAGAGAAAAGGATGAGTCATC  850

seq1  TGCCAGATGGGCCATTTCTTCTGAAAAACTTGCCACCACCCTCTCCCTTC  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGCCAGATGGGCCATTTCTTCTG-AAAACTTGCCACCACCCTCTCCCTTC  899

seq1  TTTTGTAAACCTCTCTGCCTATGAAATCTGTCACCATGTCTCACTGACTG  950
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTTTGTAAACCTCTCTGCCTATG-AATCTGTCACCATGTCTCACTGACTG  948

seq1  AATAAGGTATTCACTGGCTCATTCTCATTCTCTCTCTCTCTCTCCCTTCA  1000
      || || ||||||||||||||||||||||||||||||| ||| |||| |||
seq2  AA-AACGTATTCACTGGCTCATTCTCATTCTCTCTCTTTCTTTCCC-TCA  996

seq1  CTTCTTCTCCTCTCCGCCACCGCCTCTCACTTGAAGAAAATTTCATTCCT  1050
      |||||||||||||||| |  ||||||||||||| || |||||||||||||
seq2  CTTCTTCTCCTCTCCGGCCACGCCTCTCACTTG-AGGAAATTTCATTCCT  1045

seq1  ACTAGCTGCTAGATCCA-GTTCAATCAATCAGTTGGTTGTCGACTAATCT  1099
      |||||||||||||| || |||| ||||||||| ||| || | ||| ||||
seq2  ACTAGCTGCTAGATTCACGTTC-ATCAATCAG-TGGGTGGCAACT-ATCT  1092

seq1  CGTTCCCTGCTCTGTGCTGAGATGCCATCACAGGTGCAGGGAAGGCAGCT  1149
      |  | ||||||||| ||| |||||||||| | |  |||||||  | ||  
seq2  CCGTTCCTGCTCTGGGCTAAGATGCCATCCCGGTGGCAGGGAGAGGAGAC  1142

seq1  TCTGAGAACATCAGCCCCAACCTCAGTACGTGTTATGCACTCGACTTCCA  1199
      ||||   ||||| ||||||||||||  ||   |||||| ||  |||  ||
seq2  TCTGGAGACATCCGCCCCAACCTCATGACTGTTTATGCTCTGCACT--CA  1190

seq1  CCTACATGCAT  1210
       ||||||||||
seq2  -CTACATGCAT  1200


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