BAC Information

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BAC

Clone NameB6Ng01-033H01
Chromosome18 (Build37)
Map Location 40,467,676 - 40,467,925
singlet/doubletsinglet
Overlap geneKctd16
Upstream geneArhgap26, Nr3c1, Pabpc2, LOC100041939, Yipf5
Downstream geneEG225416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033H01.bB6Ng01-033H01.g
ACCDH862487DH862488
length806246
definitionDH862487|Mus musculus domesticus DNA, BAC clone: B6Ng01-033H01, 5' end.DH862488|Mus musculus domesticus DNA, BAC clone: B6Ng01-033H01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcttcacaatgataggaagagccgacatcgaaggatcaaaaag
cgacgtcgctatgaacgcttggccgccacaagccagttatccctgtggta
acttttctgacacctcctgcttaaaacccaaaaggtcagaaggatcgtga
ggccccgctttcacggtctgtattcgtactgaaaatcaagatcaagcgag
cttttgcccttctgctccacgggaggtttctgtcctccctgagctcgcct
taggacacctgcgttaccgtttgacaggtgtaccgccccagtcaaactcc
ccacctggcactgtccccggagcgggtcgcgcccgcccgcacgcgcggga
cggacgcttggcgccagaagcgagagcccctcggggctcgcccccccgcc
tcaccgggtcagtgaaaaaacgatgagagtagtggtatttcaccggcggc
ccgcgaggccggcgtgccccgaccccgacgcgaggacggggccgggcgcc
gggggcctcccacttattctacacctctcatgtctcttcaccgtgccaga
ctagagtcaagctcaacagggtcttctttccccgctgattccgccaagcc
cgttcccttggctgtggtttcgctggatagtaggtagggacagtgggaat
ctcgttcatccattcatgcgcgtcactaattagatgacgaggcatttggc
taccttaagagagtcatagtttactcccgccgtttacccgcgcttcattg
aatttcttcactttgacatttcagagcactggggcagaaaatcacatcgc
gtcaac
tctgaactcactgtcctttcaggtccacatttgctctggctctggcaact
gactgaaccaaacaattaggctcatacctagaactttggaaatggtaatg
gagttgataacacaccctaacagaaagaggaatgctccactaactagtac
actttcactagaagcctcaccctgtcagcagtttaggaatttgtaaagcc
aatctggacaatatttaaatggtttggaatttctaccttcatgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_40467676_40467925
seq2: B6Ng01-033H01.g_69_320 (reverse)

seq1  AAACATGAA-GTAGAAATTCCAAATCATGTAAATATTGTCCAGATTGGCT  49
      ||||||||| |||||||||||||| ||| |||||||||||||||||||||
seq2  AAACATGAAGGTAGAAATTCCAAACCATTTAAATATTGTCCAGATTGGCT  50

seq1  TTACAAATTCCTAAACTGCTGGCAGGGCGAGGCTTCTAGTGAAAGTCTTC  99
      ||||||||||||||||||||| ||||| |||||||||||||||||| | |
seq2  TTACAAATTCCTAAACTGCTGACAGGGTGAGGCTTCTAGTGAAAGTGTAC  100

seq1  TAGTGAGTGGAGCCTTCCTCTTTCTGTTAGAGTGTGTTTTCAACTCCATT  149
      |||| |||||||| |||||||||||||||| ||||||| |||||||||||
seq2  TAGTTAGTGGAGCATTCCTCTTTCTGTTAGGGTGTGTTATCAACTCCATT  150

seq1  ACCATTTTCGAAGATCTAGGTATGAGCCT-ATTGTTTGGTTCAGTCAGTT  198
      ||||||| | ||| ||||||||||||||| ||||||||||||||||||||
seq2  ACCATTTCCAAAGTTCTAGGTATGAGCCTAATTGTTTGGTTCAGTCAGTT  200

seq1  GCCAGAGCCAGAGCAAAGGTGGACCTGAAAGGACAGTGAGTTCAGAGAAT  248
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GCCAGAGCCAGAGCAAATGTGGACCTGAAAGGACAGTGAGTTCAGAGAAT  250

seq1  TC  250
      ||
seq2  TC  252