BAC Information

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BAC

Clone NameB6Ng01-033K04
Chromosome18 (Build37)
Map Location 70,386,881 - 70,388,036
singlet/doubletsinglet
Overlap genenone
Upstream geneEG225681, Tcf4, Ccdc68, Rab27b
Downstream gene2310002L13Rik, 4930503L19Rik, Stard6, Poli, Mbd2, EG668032
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033K04.bB6Ng01-033K04.g
ACCDH862626DH862627
length1,0531,141
definitionDH862626|Mus musculus domesticus DNA, BAC clone: B6Ng01-033K04, 5' end.DH862627|Mus musculus domesticus DNA, BAC clone: B6Ng01-033K04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgaaccccatttttaatggggttatttgaatt
tctggagtccagcttcttgagctctttgtatatattggatattagtcccc
tatcagatttaggattggtaaaaatcctttcccaatatgttggtggtctt
tttgtcttattgatggtgtcttttgccttatagaagctttgcaattttat
ggggttccatttgtcaattcttgatcttacagccaagtcattgctctttt
gtttagaaatttttcccctgtgcccatatcttcttttccctactttctcc
tctattaatttcagtgtctctggtcttatgtggaggtctttgatcccctt
agacttgagctttgtacaaggagataagaatggatcaactcacattcttc
tacatgttaaccgccagttgtgccagcaccatttgttgaaaatgctgtct
tttttccactggatggttttagctcccttgtcaaaaatcaagtgaccaaa
gctgtgtggattcatttctggatcgtcaattctattctattgatcttcct
gtctgtcactgtaccagtgccatggagattttatcacaatcgctctgtag
tacagcttaatgtcaggcatggtgattccaccagaggttcttttactgtt
cagaatactttttgctatcctaagttttttatttttccagaagaatttgc
aaattgccttttttaacttagttaagaattgagttggaattttgatgggg
attgcattgaatctatagattgcttttggcaggatagccatttttattat
attaatcctgtcaatccatgagaatgggagatctttccatcttctgagat
cttctagttttccttggtgttgcctggaagattttgatggcagaaggact
tctcaggaggtgggggagctataggtcagacaatggagtttaggtacccg
atctgcttgctgttgcctcaggcgatacattggcaagagattggtgtgga
acattccctgctggactccctaagacctgatggcccttacatgaagacag
agc
gaattcattacacatgtgggaagtatgaggaaaggccaagatttcttcca
aggacaaggactggttatcagtcctatgtagacacagcttctaagagatt
ctccattgctacggtctctggtcgagtcagctggacaagccgaaaggttt
aaaagtcactcatgaggcaaaagagtttcaaggaaactctcctcctggag
tctagcgttctctacccatacattaatttttcattcccgtgttccattac
cgcgttagtctagtgtatgaatccacgtgctctctttcagtattttccta
ttataagtgctttttaaaattgaattctgacatggctaaagccttctgcc
agtgttccaacagtcctagaaaggtcctagagcaagatcatgggcttgga
attcagtaagattgtaaaagctaagtcactcccttacacaggaatttacc
atcactaaggaagaaggaagtttcagaccaaaggagaaaccagaaactat
agcagagttacacccatacacatatttaaaatggcctaaggggaaggtgg
actatacaagagactaaaataggaactatggcaagggcgcgaagcccttg
accctggcttctaagattagtgaatcttaggtggagcccttgttgatccc
agctgttatcaatgtattctatcccaggtggttcccgttagaccttttgt
gtttgcattcctctgttttatgtaagattccggttatctcaattgtacct
tgcaaatttgtcacccaacttccttattgtcctctgcataaaaagtctga
tgctcgatttgaaaatgacactcagattccacaaaatttctcctgtgtgc
gtctgtttgtcattcatccacgctttgcccacccgcgtcaagagacccgt
tccacgcagacacagggacccagagggtctgcagcactccatcactgaaa
atagcactgttatttataaagttacctctgactatctttacagcatacta
tccagcaaacaagatatgagggtgcggccaaagcttcataaagtaaagtg
gatttaatgtgacccactttaatgctgctagaaaagcagagattaccttt
ctagagtctaggtattctcttttaatacttgtttacatcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_70386881_70388036
seq2: B6Ng01-033K04.g_66_1206

seq1  GAATTCATTACACATGTGGGAAGTATGAGGAAAGGCCAAGATTTCTTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTACACATGTGGGAAGTATGAGGAAAGGCCAAGATTTCTTCCA  50

seq1  AGGACAAGGACTGGTTATCAGTCCTATGTAGACACAGCTTCTAAGAGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAAGGACTGGTTATCAGTCCTATGTAGACACAGCTTCTAAGAGATT  100

seq1  CTCCATTGCTACGGTCTCTGGTCGAGTCAGCTGGACAAGCCGAAAGGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTGCTACGGTCTCTGGTCGAGTCAGCTGGACAAGCCGAAAGGTTT  150

seq1  AAAAGTCACTCATGAGGCAAAAGAGTTTCAAGGAAACTCTCCTCCTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCACTCATGAGGCAAAAGAGTTTCAAGGAAACTCTCCTCCTGGAG  200

seq1  TCTAGCGTTCTCTACCCATACATTAATTTTTCATTCCCGTGTTCCATTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCGTTCTCTACCCATACATTAATTTTTCATTCCCGTGTTCCATTAC  250

seq1  CGCGTTAGTCTAGTGTATGAATCCACGTGCTCTCTTTCAGTATTTTCCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGTTAGTCTAGTGTATGAATCCACGTGCTCTCTTTCAGTATTTTCCTA  300

seq1  TTATAAGTGCTTTTTAAAATTGAATTCTGACATGGCTAAAGCCTTCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGTGCTTTTTAAAATTGAATTCTGACATGGCTAAAGCCTTCTGCC  350

seq1  AGTGTTCCAACAGTCCTAGAAAGGTCCTAGAGCAAGATCATGGGCTTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCCAACAGTCCTAGAAAGGTCCTAGAGCAAGATCATGGGCTTGGA  400

seq1  ATTCAGTAAGATTGTAAAAGCTAAGTCACTCCCTTACACAGGAATTTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTAAGATTGTAAAAGCTAAGTCACTCCCTTACACAGGAATTTACC  450

seq1  ATCACTAAGGAAGAAGGAAGTTTCAGACCAAAGGAGAAACCAGAAACTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTAAGGAAGAAGGAAGTTTCAGACCAAAGGAGAAACCAGAAACTAT  500

seq1  AGCAGAGTTACACCCATACACATATTTAAAATGGCCTAAGGGGAAGGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGTTACACCCATACACATATTTAAAATGGCCTAAGGGGAAGGTGG  550

seq1  ACTATACAAGAGACTAAAATAGGAACTATGGCAAGGGCGCGAAGCCCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACAAGAGACTAAAATAGGAACTATGGCAAGGGCGCGAAGCCCTTG  600

seq1  ACCCTGGCTTCTAAGATTAGTGAATCTTAGGTGGAGCCCTTGTTGATCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGCTTCTAAGATTAGTGAATCTTAGGTGGAGCCCTTGTTGATCCC  650

seq1  AGCTGTTATCAATGTATTCTATCCCAGGTGGTTCCCGTTAGACCTTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTATCAATGTATTCTATCCCAGGTGGTTCCCGTTAGACCTTTTGT  700

seq1  GTTTGCATTCCTCTGTTTTATGTAAGATTCCGGTTATCTCAATTGTACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCATTCCTCTGTTTTATGTAAGATTCCGGTTATCTCAATTGTACCT  750

seq1  TGCAAATTTGTCACCCAACTTCCTTATTGTCCTCTGCATAAAAAGTCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATTTGTCACCCAACTTCCTTATTGTCCTCTGCATAAAAAGTCTGA  800

seq1  TGCTCGATTTGAAAATGACACTCAGATTCCACAAAATTTCTCCTGTGTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCGATTTGAAAATGACACTCAGATTCCACAAAATTTCTCCTGTGTGC  850

seq1  GTCTGTTTGTCATTCATCCACGCTTTGCCCACCCGCGTCAAGAGACCCGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTTGTCATTCATCCACGCTTTGCCCACCCGCGTCAAGAGACCCGT  900

seq1  TCCACGCAGACACAGGGACCCAGAGGGTCTGCAGCACTCCATCACTGAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACGCAGACACAGGGACCCAGAGGGTCTGCAGCACTCCATCACTGAAA  950

seq1  ATAGCACTGTTATTTATAAAGTTACCTCTGACTATCTTTACAGCATACTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCACTGTTATTTATAAAGTTACCTCTGACTATCTTTACAGCATACTA  1000

seq1  TCCAGCAAACAAGATATGAGAGTGCAGCCAAAGCTTCATTAAAGTAAAGT  1050
      |||||||||||||||||||| |||| |||||||||||| |||||||||||
seq2  TCCAGCAAACAAGATATGAGGGTGCGGCCAAAGCTTCA-TAAAGTAAAGT  1049

seq1  GGATTTAAATGTGACCCCACTTTAATGCTGCTAAGATAGCAGAGATTTAC  1100
      |||||| ||||||| ||||||||||||||||||  | |||||||| ||||
seq2  GGATTT-AATGTGA-CCCACTTTAATGCTGCTAGAAAAGCAGAGA-TTAC  1096

seq1  CTTGTCTTAGAGTTCTATGTTAATTCTCTTTTATAATACTTTGTTTTTAA  1150
      ||| || ||||| |||| ||  |||||||||  |||||| ||||||   |
seq2  CTT-TC-TAGAG-TCTAGGT--ATTCTCTTT--TAATAC-TTGTTT---A  1135

seq1  CATCAA  1156
      ||||||
seq2  CATCAA  1141