BAC Information

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BAC

Clone NameB6Ng01-033M14
Chromosome18 (Build37)
Map Location 27,097,926 - 27,201,887
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041274
Downstream geneEG665977, EG665646
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033M14.bB6Ng01-033M14.g
ACCDH862741DH862742
length111635
definitionDH862741|Mus musculus domesticus DNA, BAC clone: B6Ng01-033M14, 5' end.DH862742|Mus musculus domesticus DNA, BAC clone: B6Ng01-033M14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,097,926 - 27,098,036)(27,201,253 - 27,201,887)
sequence
gaattcattaatttgctaatatgtttaaataattacatgttttatttatt
catgttcttacttatttttttttttggtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtg
gaattctccttctcttttatgatgaaccattgaccttgatgtacaagttg
aacatcatggtttccccaactagacatcttcaaccaatcccacttcctgt
gtttatatatcctgttgcattgtattctttgtggtctcttttcctggagc
atggtacatttttcttgctgtgatatatctcttttcaacaattgcctttc
taacttatccacctggcagaatcatgtagcacggaaatgaggccagaaaa
accacttttagcttccaatgcagcattagatctccttactattattttct
atcacagtaccaactgtatacttcaatagacgaacccaaacttctctcaa
tttgctatcacagaggtcagctctacacagtacctttgtcaaagaagatg
gttagcattttcctgcagtggagaggaaacgaacatggtaagaaagtgtc
tcaaacaaaggtaggatgagaaaacagttatgaagggagataggattttg
aagacactttacttatccaatgacattgtggaatagataagtcatacaga
tgaactccatcaaatgtagagtattctagagacatttctagtacacacag
acacacaggagagagagaaagagagagagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_27097926_27098036
seq2: B6Ng01-033M14.b_43_153

seq1  GAATTCATTAATTTGCTAATATGTTTAAATAATTACATGTTTTATTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAATTTGCTAATATGTTTAAATAATTACATGTTTTATTTATT  50

seq1  CATGTTCTTACTTATTTTTTTTTTTGGTGTGTGTGTGTGTGTGTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCTTACTTATTTTTTTTTTTGGTGTGTGTGTGTGTGTGTGTGTGT  100

seq1  GTGTGTGTGTG  111
      |||||||||||
seq2  GTGTGTGTGTG  111

seq1: chr18_27201253_27201887
seq2: B6Ng01-033M14.g_71_705 (reverse)

seq1  CTCTCTCTCTCTCTCTTTCTCTCTCTCCTGTGTGTCTGTGTGTACTAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTTTCTCTCTCTCCTGTGTGTCTGTGTGTACTAGAA  50

seq1  ATGTCTCTAGAATACTCTACATTTGATGGAGTTCATCTGTATGACTTATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCTAGAATACTCTACATTTGATGGAGTTCATCTGTATGACTTATC  100

seq1  TATTCCACAATGTCATTGGATAAGTAAAGTGTCTTCAAAATCCTATCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCACAATGTCATTGGATAAGTAAAGTGTCTTCAAAATCCTATCTCC  150

seq1  CTTCATAACTGTTTTCTCATCCTACCTTTGTTTGAGACACTTTCTTACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAACTGTTTTCTCATCCTACCTTTGTTTGAGACACTTTCTTACCA  200

seq1  TGTTCGTTTCCTCTCCACTGCAGGAAAATGCTAACCATCTTCTTTGACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCGTTTCCTCTCCACTGCAGGAAAATGCTAACCATCTTCTTTGACAA  250

seq1  AGGTACTGTGTAGAGCTGACCTCTGTGATAGCAAATTGAGAGAAGTTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACTGTGTAGAGCTGACCTCTGTGATAGCAAATTGAGAGAAGTTTGG  300

seq1  GTTCGTCTATTGAAGTATACAGTTGGTACTGTGATAGAAAATAATAGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCGTCTATTGAAGTATACAGTTGGTACTGTGATAGAAAATAATAGTAA  350

seq1  GGAGATCTAATGCTGCATTGGAAGCTAAAAGTGGTTTTTCTGGCCTCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATCTAATGCTGCATTGGAAGCTAAAAGTGGTTTTTCTGGCCTCATT  400

seq1  TCCGTGCTACATGATTCTGCCAGGTGGATAAGTTAGAAAGGCAATTGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGCTACATGATTCTGCCAGGTGGATAAGTTAGAAAGGCAATTGTTG  450

seq1  AAAAGAGATATATCACAGCAAGAAAAATGTACCATGCTCCAGGAAAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGATATATCACAGCAAGAAAAATGTACCATGCTCCAGGAAAAGAG  500

seq1  ACCACAAAGAATACAATGCAACAGGATATATAAACACAGGAAGTGGGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAAAGAATACAATGCAACAGGATATATAAACACAGGAAGTGGGATT  550

seq1  GGTTGAAGATGTCTAGTTGGGGAAACCATGATGTTCAACTTGTACATCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAAGATGTCTAGTTGGGGAAACCATGATGTTCAACTTGTACATCAA  600

seq1  GGTCAATGGTTCATCATAAAAGAGAAGGAGAATTC  635
      |||||||||||||||||||||||||||||||||||
seq2  GGTCAATGGTTCATCATAAAAGAGAAGGAGAATTC  635