BAC Information

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BAC

Clone NameB6Ng01-035A09
Chromosome18 (Build37)
Map Location 87,533,120 - 87,534,047
singlet/doubletsinglet
Overlap genenone
Upstream geneNeto1, Cbln2, LOC100039872, LOC100039881, LOC665437, LOC435580, LOC546719, LOC383318
Downstream genePpia-ps18_1039.1, LOC329008, LOC100039961, LOC100039972
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035A09.bB6Ng01-035A09.g
ACCDH863605DH863606
length1,128923
definitionDH863605|Mus musculus domesticus DNA, BAC clone: B6Ng01-035A09, 5' end.DH863606|Mus musculus domesticus DNA, BAC clone: B6Ng01-035A09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttgttttagctctgagccccttttgattttctggggtccacctt
cttgagttcgttatatatattggatattagtcccctaactgatttaggat
aggtaaagattctttcccagtctgttggtggcctttttgtcttattgact
ttgtcttttgccttgcagaagctttgcaattttatgaggtcccatttgtc
cattcatgatcttacagaacaagccattgctgttctattcaggaattttt
cccctgtacccatatctttgaggcttttccctactttctcctctataagt
ttcagtgtctctggttatatgtggagtttctcaaaccacttagatttgac
cttagtacaaggagataggaatggatcaattcgcattcttctacatgata
cctgccagttgtgccagcaccatttgttgaaaatgctgtcttttttccac
tggatggtttttgctcccttgtcaaagatcaagtgaccataggtgagtgg
cttcatttctgggtcttcaattctattccactggtctacttgtctgtccc
tataccagtaccatgcagtttttatcacaattgctctgtagttcagcttt
agatcaggcatggtgattccaccagaggttcttttatccttgagaagagt
ttttgctatcctaggttttttgttattccagatgaatttgcagattgccc
tttctaattccttgaagaattgagttggaattttgatgtggattgcattg
aatctgtagattgcttttggcaagatagccatttttactatattgatcct
gccaatccatgagcatgggagatcttttcatcttctgagatcttctttaa
ttttttcttcagagacttgaagttcttatcatacagatctttcacttcct
taatagagtcacgccagatattttatatattgtgactatgagaaggtgtt
gttttctaatttctttctcagcattgtatcctttgtgttgagaaagccat
gacttgttgagttattttaatcagctcttcctgaagcttgttttacagcc
tagccgtctctgggtgaattaaggtgcactaaattatcatctctatgctc
ataagatattgagcttcttccctccact
gaattcagtactgcacaatattattcaaggtgtgaattatatggctgaaa
gtgttcaggtgtggggagccaccctcacattcgccattacaagatggcgc
tgacatcctgtgttctaagtggtaaacaaataatctgtgcatgtgccaag
ggtagttctccactctatgtgctctgctttccccttgacgacaactcagc
caatgggctgcagccaatcagggagcaacacgtcctaggtggaggataat
tctccttaaaagggacggggttttgccattttctctcttgctcctgaaga
tgtaagcaataaagcttttgccgcagaagattcaggtttgttgcgtcttt
cctggccggtcgagcgtgggtaatattcagggtagatatgaggtactaat
aatagataatagacgtatccatgtgtgacacctactttggtaaggttctg
tgtgttatggaaaatctgataattctctcatgtatgtccactcaaatagc
taataatactgctaattttatttatgttggaacaatgaaccacattttca
tatttgttttatcatttataactttactaaaactttatcataaagaaggt
gcaaataaaacaatgacatgttaatttaactagatctattgtttatgcat
ctcaatgaattttggtccattttgcatagccattctaaagctcagagctt
cacatggatttcacaattcactatcaaatatatttttacgattattctac
caccaaaaatcattttccagagttaaatctagataaaaactaacatatgc
cctctttcaatgagatcaagtgtctactactgcattcagtccttctcatc
ctctattttccctcatctactatgctttctagatatgtacccacatgaat
acgtttagtgtatgtgtgtgtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_87533120_87534047
seq2: B6Ng01-035A09.g_68_990

seq1  GAATTCAGTACTGCACAATATTATTCAAGGTGTGAATTATATGGCTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTACTGCACAATATTATTCAAGGTGTGAATTATATGGCTGAAA  50

seq1  GTGTTCAGGTGTGGGGAGCCACCCTCACATTCGCCATTACAAGATGGCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCAGGTGTGGGGAGCCACCCTCACATTCGCCATTACAAGATGGCGC  100

seq1  TGACATCCTGTGTTCTAAGTGGTAAACAAATAATCTGTGCATGTGCCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATCCTGTGTTCTAAGTGGTAAACAAATAATCTGTGCATGTGCCAAG  150

seq1  GGTAGTTCTCCACTCTATGTGCTCTGCTTTCCCCTTGACGACAACTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTTCTCCACTCTATGTGCTCTGCTTTCCCCTTGACGACAACTCAGC  200

seq1  CAATGGGCTGCAGCCAATCAGGGAGCAACACGTCCTAGGTGGAGGATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGCTGCAGCCAATCAGGGAGCAACACGTCCTAGGTGGAGGATAAT  250

seq1  TCTCCTTAAAAGGGACGGGGTTTTGCCATTTTCTCTCTTGCTCCTGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTAAAAGGGACGGGGTTTTGCCATTTTCTCTCTTGCTCCTGAAGA  300

seq1  TGTAAGCAATAAAGCTTTTGCCGCAGAAGATTCAGGTTTGTTGCGTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCAATAAAGCTTTTGCCGCAGAAGATTCAGGTTTGTTGCGTCTTT  350

seq1  CCTGGCCGGTCGAGCGTGGGTAATATTCAGGGTAGATATGAGGTACTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCGGTCGAGCGTGGGTAATATTCAGGGTAGATATGAGGTACTAAT  400

seq1  AATAGATAATAGACGTATCCATGTGTGACACCTACTTTGGTAAGGTTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATAATAGACGTATCCATGTGTGACACCTACTTTGGTAAGGTTCTG  450

seq1  TGTGTTATGGAAAATCTGATAATTCTCTCATGTATGTCCACTCAAATAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTATGGAAAATCTGATAATTCTCTCATGTATGTCCACTCAAATAGC  500

seq1  TAATAATACTGCTAATTTTATTTATGTTGGAACAATGAACCACATTTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATACTGCTAATTTTATTTATGTTGGAACAATGAACCACATTTTCA  550

seq1  TATTTGTTTTATCATTTATAACTTTACTAAAACTTTATCATAAAGAAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTTTATCATTTATAACTTTACTAAAACTTTATCATAAAGAAGGT  600

seq1  GCAAATAAAACAATGACATGTTAATTTAACTAGATCTATTGTTTATGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATAAAACAATGACATGTTAATTTAACTAGATCTATTGTTTATGCAT  650

seq1  CTCAATGAATTTTGGTCCATTTTGCATAGCCATTCTAAAGCTCAGAGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGAATTTTGGTCCATTTTGCATAGCCATTCTAAAGCTCAGAGCTT  700

seq1  CACATGGATTTCACAATTCACTATCAAATATATTTTTACGATTATTCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGGATTTCACAATTCACTATCAAATATATTTTTACGATTATTCTAC  750

seq1  CACCAAAAATCA-TTTCCAGAGTTAAATCTAGATAAAAACTAACAATATG  799
      |||||||||||| ||||||||||||||||||||||||||||||| |||||
seq2  CACCAAAAATCATTTTCCAGAGTTAAATCTAGATAAAAACTAAC-ATATG  799

seq1  CCCTCTTTCAATGAGATCAAGTGTCTACTACTTGCATTCAGTCCTTCTTC  849
      ||||||||||||||||||||||||||||||| ||||||||||||||| ||
seq2  CCCTCTTTCAATGAGATCAAGTGTCTACTAC-TGCATTCAGTCCTTC-TC  847

seq1  ATCCTCTAATTTTCCCTCATCTTACTATGCTTTCTAGATATTGTACCCAC  899
      ||||||| ||||||||||||| |||||||||||||||||| |||||||||
seq2  ATCCTCT-ATTTTCCCTCATC-TACTATGCTTTCTAGATA-TGTACCCAC  894

seq1  ATGAATACGTTTAGTGTATGTGTGTGTAT  928
      |||||||||||||||||||||||||||||
seq2  ATGAATACGTTTAGTGTATGTGTGTGTAT  923