BAC Information

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BAC

Clone NameB6Ng01-035N04
Chromosome18 (Build37)
Map Location 40,467,676 - 40,467,919
singlet/doubletsinglet
Overlap geneKctd16
Upstream geneArhgap26, Nr3c1, Pabpc2, LOC100041939, Yipf5
Downstream geneEG225416
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035N04.bB6Ng01-035N04.g
ACCDH864187DH864188
length276207
definitionDH864187|Mus musculus domesticus DNA, BAC clone: B6Ng01-035N04, 5' end.DH864188|Mus musculus domesticus DNA, BAC clone: B6Ng01-035N04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tctgaactcactgtcctttcaggtccacatttgctctggctctggcaact
gactgaaccaaacaattaggctcatacctagaactttggaaatggtaatg
gagttgataacacaccctaacagaaagaggaatgctccactaactagtac
actttcactagaagcctcaccctgtcagcagtttaggaatttgtaaagcc
aatctggacaatatttaaatggtttggaatttctaccttcatgttttttt
tttttttttttttttttttttttttt
acagggaaatcatcactcagggacttcaggtagaaaactagccagtcagc
ctctggatagacaaggctcaacagttcagagaaccaggccatcgcaaata
gttcacagacctgcaaggaagacatgcagatccctgccccccaccccacc
cctcccccagccccacccaaacatagggagaaaaggcagtgtgggggagg
gggaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_40467676_40467919
seq2: B6Ng01-035N04.b_54_299 (reverse)

seq1  AAACATGAA-GTAGAAATTCCAAATCATGTAAATATTGTCCAGATTGGCT  49
      ||||||||| |||||||||||||| ||| |||||||||||||||||||||
seq2  AAACATGAAGGTAGAAATTCCAAACCATTTAAATATTGTCCAGATTGGCT  50

seq1  TTACAAATTCCTAAACTGCTGGCAGGGCGAGGCTTCTAGTGAAAGTCTTC  99
      ||||||||||||||||||||| ||||| |||||||||||||||||| | |
seq2  TTACAAATTCCTAAACTGCTGACAGGGTGAGGCTTCTAGTGAAAGTGTAC  100

seq1  TAGTGAGTGGAGCCTTCCTCTTTCTGTTAGAGTGTGTTTTCAACTCCATT  149
      |||| |||||||| |||||||||||||||| ||||||| |||||||||||
seq2  TAGTTAGTGGAGCATTCCTCTTTCTGTTAGGGTGTGTTATCAACTCCATT  150

seq1  ACCATTTTCGAAGATCTAGGTATGAGCCT-ATTGTTTGGTTCAGTCAGTT  198
      ||||||| | ||| ||||||||||||||| ||||||||||||||||||||
seq2  ACCATTTCCAAAGTTCTAGGTATGAGCCTAATTGTTTGGTTCAGTCAGTT  200

seq1  GCCAGAGCCAGAGCAAAGGTGGACCTGAAAGGACAGTGAGTTCAGA  244
      ||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCCAGAGCCAGAGCAAATGTGGACCTGAAAGGACAGTGAGTTCAGA  246