BAC Information

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BAC

Clone NameB6Ng01-036B12
Chromosome18 (Build37)
Map Location 64,958,984 - 65,117,183
singlet/doubletdoublet
Overlap genenone
Upstream geneWdr7, LOC629436, LOC667773, St8sia3, LOC433193, Onecut2, LOC667783, LOC100043304, Fech, Nars, Atp8b1, LOC629480
Downstream geneNedd4l, Alpk2, LOC667816, Malt1, LOC638570, LOC100042820, Zfp532, 5330437I02Rik, Sec11c, Grp, Rax, Cplx4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036B12.bB6Ng01-036B12.g
ACCDH864381DH864382
length416919
definitionDH864381|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B12, 5' end.DH864382|Mus musculus domesticus DNA, BAC clone: B6Ng01-036B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,958,984 - 64,959,405)(65,116,277 - 65,117,183)
sequence
ttactccctagtggcccaaaccctagtatttgatagactagcattctcag
gatgatggctggatccagatggtcaaggtatccccatatttctctatatt
ttctttatatcttatgttggtcctgattgatgtggttttttttcaaatgc
tatgactattttaacactattggtattattatgatttaaaatgaaatgtg
gtccacaggctgggatggtgctggagatggactgagagttctatgtctta
atctacaggccacagagaccttaaagcccacctccacagtgatgcacttt
cttcaacaaggccacacctcctaatagtgccactccccataggccaggct
tttaaacacatgagtctatgggagctattcctattcaaatcatgagaggt
aaggggagggggaggg
gaattctgttttgaaaacaaacgctgcaagcagctctcacctcctaccaa
actcacccccttcccaagcacagcctgttatgcatgcgtgacaggcgctc
cacagcgtggaactaaccacactgtatccgacacactcagcggagcggtt
actgtaggtagggaatcattaactgtacagtgagagtgctcgtggcgacc
cagaggccaagttcagccaggagaaagcaaggcttccagtgccctcagcc
tcccagacttcagcctggacttcatcctatgctccaggcatttcaatgtg
tcctccgccacactgtgccacacggagcaagggttacacaccccagcaca
gaaccttggttaagaatcagagtgagccatgtctgcccactgcagttggg
aaagagaggctcaccccaaactgcccaccctcctcgcaccaggtaatctg
acgaagcatgaataagacagtaggcaatgagggtggagaaaggaacgggc
tttaggaattaggatttcattgtttatgtcacagacctgtttatcttgga
actcaagccccccagtgagccaggcgttgtactatcctcccttaatccta
acacttaagagatgggagttaggaattattctcagttgaacactagcttt
gagctaaatgtagcaagaccctgtctcaaaaccaaacaaccaaccaacca
acaaacaaaccaacaggtttcaccattgtcatgggtgcctgtattttttg
gctcaggggcacaatgttaggcgtggggaacctagaaacttgtctctatt
gcctggaatcaaaacaactttcaaagggaaggtcctcctcacttctagaa
gtcctggaagagggtttactacagttcacaggaatgttgggatgaataaa
ccgggtcctggtgtgagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_64958984_64959405
seq2: B6Ng01-036B12.b_45_466

seq1  GAATTCTTACTCCCTAGTGGCCCAAACCCTAGTATTTGATAGACTAGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTCCCTAGTGGCCCAAACCCTAGTATTTGATAGACTAGCAT  50

seq1  TCTCAGGATGATGGCTGGATCCAGATGGTCAAGGTATCCCCATATTTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGATGATGGCTGGATCCAGATGGTCAAGGTATCCCCATATTTCTC  100

seq1  TATATTTTCTTTATATCTTATGTTGGTCCTGATTGATGTGGTTTTTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTCTTTATATCTTATGTTGGTCCTGATTGATGTGGTTTTTTTTC  150

seq1  AAATGCTATGACTATTTTAACACTATTGGTATTATTATGATTTAAAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTATGACTATTTTAACACTATTGGTATTATTATGATTTAAAATGA  200

seq1  AATGTGGTCCACAGGCTGGGATGGTGCTGGAGATGGACTGAGAGTTCTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGTCCACAGGCTGGGATGGTGCTGGAGATGGACTGAGAGTTCTAT  250

seq1  GTCTTAATCTACAGGCCACAGAGACCTTAAAGCCCACCTCCACAGTGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAATCTACAGGCCACAGAGACCTTAAAGCCCACCTCCACAGTGATG  300

seq1  CACTTTCTTCAACAAGGCCACACCTCCTAATAGTGCCACTCCCCATAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTCTTCAACAAGGCCACACCTCCTAATAGTGCCACTCCCCATAGGC  350

seq1  CAGGCTTTTAAACACATGAGTCTATGGGAGCTATTCCTATTCAAATCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTTTAAACACATGAGTCTATGGGAGCTATTCCTATTCAAATCATG  400

seq1  AGAGGTAAGGGGAGGGGGAGGG  422
      ||||||||||||||||||||||
seq2  AGAGGTAAGGGGAGGGGGAGGG  422

seq1: chr18_65116277_65117183
seq2: B6Ng01-036B12.g_68_986 (reverse)

seq1  TCCTCACACCA-GACCC-GTTTATTCATCCCAACATTCCTTGTGACTGGT  48
      ||||||||||| ||||| ||||||||||||||||||||| |||||   ||
seq2  TCCTCACACCAGGACCCGGTTTATTCATCCCAACATTCC-TGTGAACTGT  49

seq1  AGTAAA-CCTCTTCCA-GACTTCTTAAGAGGTGA-GAGGACCTTCCCTTT  95
      |||||| ||||||||| |||||||  ||| |||| |||||||||||||||
seq2  AGTAAACCCTCTTCCAGGACTTCT--AGAAGTGAGGAGGACCTTCCCTTT  97

seq1  G-AAGTTGTTTTGA-TCCAGGCGATAGAGACAAGTTTCTAGGTT-CCCAC  142
      | |||||||||||| ||||||| ||||||||||||||||||||| |||||
seq2  GAAAGTTGTTTTGATTCCAGGCAATAGAGACAAGTTTCTAGGTTCCCCAC  147

seq1  GCCT-ACATTGTGGCCCCTGAGCC-AAAGATACAGGCACCCATGACAAT-  189
      |||| ||||||| ||||||||||| ||| |||||||||||||||||||| 
seq2  GCCTAACATTGT-GCCCCTGAGCCAAAAAATACAGGCACCCATGACAATG  196

seq1  GTGAAACCTGTTTGTTTGTTTGTTGGTTGGTTGGTTGTTTGGTTTTGAGA  239
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTGAAACCTGTTGGTTTGTTTGTTGGTTGGTTGGTTGTTTGGTTTTGAGA  246

seq1  CAGGGTCTTGCTACA-TTAGCTC-AAGCTAGTGTTCAACTGAGAAT-ATT  286
      ||||||||||||||| ||||||| |||||||||||||||||||||| |||
seq2  CAGGGTCTTGCTACATTTAGCTCAAAGCTAGTGTTCAACTGAGAATAATT  296

seq1  CCTAACT-CCATCTCTTAAGTGTTAGGATTATGGGAGGATAGTACAACGC  335
      ||||||| ||||||||||||||||||||||| ||||||||||||||||||
seq2  CCTAACTCCCATCTCTTAAGTGTTAGGATTAAGGGAGGATAGTACAACGC  346

seq1  CTGGCTCACTGGGGGGCTTGAGTTCCAAGAT-AACAGGTCTGTGACATAA  384
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CTGGCTCACTGGGGGGCTTGAGTTCCAAGATAAACAGGTCTGTGACATAA  396

seq1  ACAATGAAATCCTAATTCCTAAAGCCCGTTCCTTTCTCCACCCTCATTGC  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAAATCCTAATTCCTAAAGCCCGTTCCTTTCTCCACCCTCATTGC  446

seq1  CTACTGTCTTATTCATGCTTCGTCAGATTACCTGGTGCGAGGAGGGTGGG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTCTTATTCATGCTTCGTCAGATTACCTGGTGCGAGGAGGGTGGG  496

seq1  CAGTTTGGGGTGAGCCTCTCTTTCCCAACTGCAGTGGGCAGACATGGCTC  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGGGGTGAGCCTCTCTTTCCCAACTGCAGTGGGCAGACATGGCTC  546

seq1  ACTCTGATTCTTAACCAAGGTTCTGTGCTGGGGTGTGTAACCCTTGCTCC  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGATTCTTAACCAAGGTTCTGTGCTGGGGTGTGTAACCCTTGCTCC  596

seq1  GTGTGGCACAGTGTGGCGGAGGACACATTGAAATGCCTGGAGCATAGGAT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCACAGTGTGGCGGAGGACACATTGAAATGCCTGGAGCATAGGAT  646

seq1  GAAGTCCAGGCTGAAGTCTGGGAGGCTGAGGGCACTGGAAGCCTTGCTTT  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCCAGGCTGAAGTCTGGGAGGCTGAGGGCACTGGAAGCCTTGCTTT  696

seq1  CTCCTGGCTGAACTTGGCCTCTGGGTCGCCACGAGCACTCTCACTGTACA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGCTGAACTTGGCCTCTGGGTCGCCACGAGCACTCTCACTGTACA  746

seq1  GTTAATGATTCCCTACCTACAGTAACCGCTCCGCTGAGTGTGTCGGATAC  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGATTCCCTACCTACAGTAACCGCTCCGCTGAGTGTGTCGGATAC  796

seq1  AGTGTGGTTAGTTCCACGCTGTGGAGCGCCTGTCACGCATGCATAACAGG  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGTTAGTTCCACGCTGTGGAGCGCCTGTCACGCATGCATAACAGG  846

seq1  CTGTGCTTGGGAAGGGGGTGAGTTTGGTAGGAGGTGAGAGCTGCTTGCAG  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTTGGGAAGGGGGTGAGTTTGGTAGGAGGTGAGAGCTGCTTGCAG  896

seq1  CGTTTGTTTTCAAAACAGAATTC  907
      |||||||||||||||||||||||
seq2  CGTTTGTTTTCAAAACAGAATTC  919