BAC Information

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BAC

Clone NameB6Ng01-037F08
Chromosome18 (Build37)
Map Location 75,414,480 - 75,582,278
singlet/doubletdoublet
Overlap geneDym, Smad7
Upstream geneMbd1, Ccdc11, LOC628298, LOC668124, LOC668126, Myo5b, Acaa2, LOC672799, Lipg, Rpl17, BC031181, LOC628356, EG667777
Downstream geneGm672, Zbtb7c, 4833419G08Rik, LOC668184, Smad2, LOC668188
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037F08.bB6Ng01-037F08.g
ACCDH865239DH865240
length407252
definitionDH865239|Mus musculus domesticus DNA, BAC clone: B6Ng01-037F08, 5' end.DH865240|Mus musculus domesticus DNA, BAC clone: B6Ng01-037F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,414,480 - 75,414,892)(75,582,027 - 75,582,278)
sequence
tatttaataaagtcacttagagttcttctaatctcaggtttgcaacgccc
tctcggaaatcttgatgacattttacattttgagagacccctcccacatg
atctccacttctctgccctaaccaaaactaggggcgtgaaagctggaccg
acagacagccttatggactgacacacagatggaattagaggtggttcagc
ttccttcccacaatagacacctattgtaattctcgctccctcttggccac
acctatttcatcagtgagctgggcactatactcttgtaggttttacttcc
tatttcctttgacagaaaactcagtttcccaagtccttccctgccatttg
taccacttatatcccatgatgccctatgtgggagtgtggaagtatatgtg
ggggtgg
tcttatgtgagagaattctgtgtgtgagagagaattttctgtgtgagaga
gacaattctgcctgtgagagacagttctgtctgtgagagacaatcttgtg
agaggaagagaattctgtgagagagaaaagaatctctgtatgagagacag
ttctgagtgtgtgtgagagaagattctgtgtgtgagagataattttctgt
gtgagagacagttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
tg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_75414480_75414892
seq2: B6Ng01-037F08.b_49_461

seq1  GAATTCTATTTAATAAAGTCACTTAGAGTTCTTCTAATCTCAGGTTTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATTTAATAAAGTCACTTAGAGTTCTTCTAATCTCAGGTTTGCA  50

seq1  ACGCCCTCTCGGAAATCTTGATGACATTTTACATTTTGAGAGACCCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCCTCTCGGAAATCTTGATGACATTTTACATTTTGAGAGACCCCTCC  100

seq1  CACATGATCTCCACTTCTCTGCCCTAACCAAAACTAGGGGCGTGAAAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGATCTCCACTTCTCTGCCCTAACCAAAACTAGGGGCGTGAAAGCT  150

seq1  GGACCGACAGACAGCCTTATGGACTGACACACAGATGGAATTAGAGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCGACAGACAGCCTTATGGACTGACACACAGATGGAATTAGAGGTGG  200

seq1  TTCAGCTTCCTTCCCACAATAGACACCTATTGTAATTCTCGCTCCCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTTCCTTCCCACAATAGACACCTATTGTAATTCTCGCTCCCTCTT  250

seq1  GGCCACACCTATTTCATCAGTGAGCTGGGCACTATACTCTTGTAGGTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACACCTATTTCATCAGTGAGCTGGGCACTATACTCTTGTAGGTTTT  300

seq1  ACTTCCTATTTCCTTTGACAGAAAACTCAGTTTCCCAAGTCCTTCCCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTATTTCCTTTGACAGAAAACTCAGTTTCCCAAGTCCTTCCCTGC  350

seq1  CATTTGTACCACTTATATCCCATGATGCCCTATGTGGGAGTGTGGAAGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTACCACTTATATCCCATGATGCCCTATGTGGGAGTGTGGAAGTA  400

seq1  TATGTGGGGGTGG  413
      |||||||||||||
seq2  TATGTGGGGGTGG  413

seq1: chr18_75582027_75582278
seq2: B6Ng01-037F08.g_77_328 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACAGAACTGTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACAGAACTGTCTCTC  50

seq1  ACACAGAAAATTATCTCTCACACACAGAATCTTCTCTCACACACACTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAAATTATCTCTCACACACAGAATCTTCTCTCACACACACTCAG  100

seq1  AACTGTCTCTCATACAGAGATTCTTTTCTCTCTCACAGAATTCTCTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTCTCTCATACAGAGATTCTTTTCTCTCTCACAGAATTCTCTTCCT  150

seq1  CTCACAAGATTGTCTCTCACAGACAGAACTGTCTCTCACAGGCAGAATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAAGATTGTCTCTCACAGACAGAACTGTCTCTCACAGGCAGAATTG  200

seq1  TCTCTCTCACACAGAAAATTCTCTCTCACACACAGAATTCTCTCACATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCACACAGAAAATTCTCTCTCACACACAGAATTCTCTCACATAA  250

seq1  GA  252
      ||
seq2  GA  252