BAC Information

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BAC

Clone NameB6Ng01-038L14
Chromosome18 (Build37)
Map Location 58,929,355 - 59,087,349
singlet/doubletdoublet
Overlap geneAdamts19
Upstream geneSlc12a2, 9330166H04Rik, Fbn2, Slc27a6, Isoc1
Downstream geneA730017C20Rik, 4833446K15Rik, LOC667549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038L14.bB6Ng01-038L14.g
ACCDH866197DH866198
length1,1081,154
definitionDH866197|Mus musculus domesticus DNA, BAC clone: B6Ng01-038L14, 5' end.DH866198|Mus musculus domesticus DNA, BAC clone: B6Ng01-038L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,929,355 - 58,930,473)(59,086,172 - 59,087,349)
sequence
gaattcacctttaaaaattgagttaaagaggcatttttcctcttttcctt
ccatttgggtttaattaagacataactactataaagagaaagccagaggg
aacagccataggtaatccccatcagcatctatcatgccccagctcctgac
agtgccagtcttctgcaagatttgaaccacagcaggtggggcttccccag
ctccttctcacttcttgtttcgacacactcagcatcagtctctcacagaa
gtgtttttctttgtgtttatggtgaattcatttcgaacactgttgtaatc
aacacccatgaatacttcaataatatggtacaactcagaggtagacccat
agataagggcagttgtgtatgcataatgctctgctttaaaaaaatatata
attatattctatatattctagatacaattatatataaatttatatataat
aataacatttcttccctccatgcccttcctccataccctctcatatacct
ctccttgatctctttcaaattcatgccctcttttgtggtaataattatta
tatgcatatatatatatatatatatatatatttcgtagtgtaatgaaaat
ctttttcttcttaaatgagaaaatcaaattattgaagacaatgtgttgat
ttaaagaggtatatatggtgctttgaagttcataattatgactgtaataa
ctacatcctgttatttttctcctcagtgtaaaaacaattttatattgcaa
tatttcatatgcactgtgggacatttaaaaccacatccacaatctattcc
acattcctttcaaatgatgctccctaattcctgcacttcaacatgggcta
caacttggggacctgccttttgacaaatagaggatactgagttaaggttt
ggttaaagaaaggggtgtttttcattgttccctcacatcctcactcacta
caggacagtctgccatactgttaactatgctatgagaagacttacccgaa
aggactgaagcttcagtccggcttgtgaggagctgaggctgccaataacc
cggtcagtgagctcagactgagctctagcttcacaatatgtgatgttatg
gccatgac
gaattcttttttatactctaagaacttgaagcattatatgactccaatat
aatctgttctcatgctataaatgtatttcgacttgtgatgggagaaagaa
taaaatgttattgactatctgtgtaactttgggtaaaatattaaaaattg
ataaaaatcttaaaagacatgtaaaaatctctccactgcataggttatgt
atgattttaatctgtatcactataaagaactgcagggctaacatcagaat
taacatatagttgcaataaatatgcatacgacattgcaaaattattccat
ccaagtcaacaccatcaaataatttactacattaaacaactgatccattt
aagttctccagtgtgcctcaaactgatttttttcagagatacttacccac
agtgtcacatggctcatctttgtgcacacagaaatctttcctagaaggaa
aagtagaaaatcaaagtaaagattgattctctcaggcaatcgccagtcat
catgagacttatatttacataagccacatcatatattccctcaagtttaa
tataattcagaataagatgaaggaatagatctgaaaagatgactgatcag
aacaatatgagatatcttcctagttagtagataccacttcagtaccaaag
ccctggtttgttttgaattttgctgcaagttttcattacattttttttct
ttacaaaaccatagtttatggtcatggtaaattatttaccatgtgaaaat
atcataacactgcttcatcttataaaataacttcatgttaagagcttact
attccttactagtaaggaatactgtttcaagacatccacagtttcttttc
aagactttccaggcaaaaattttcaaacactgaaaaacatgtttgaataa
gcatgaagaagttagtatttttcaatgaactctttgaattatagttcata
ttttgttcttaatttagtgttacgtgttacagcattccttggaaatactt
actctgttccacatattaggatttcaagacgcaatttagagaacatatca
cagttagtgtaagggaatgcttaatttaatacaatataatactatcttgt
gctaggggtgattaacaacgttctaaccacctccatccaggcatccatct
cact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_58929355_58930473
seq2: B6Ng01-038L14.b_45_1152

seq1  GAATTCACCTTTAAAAATTGAGTTAAAGAGGCATTTTTCCTCTTTTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTTTAAAAATTGAGTTAAAGAGGCATTTTTCCTCTTTTCCTT  50

seq1  CCATTTGGGTTTAATTAAGACATAACTACTATAAAGAGAAAGCCAGAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTGGGTTTAATTAAGACATAACTACTATAAAGAGAAAGCCAGAGGG  100

seq1  AACAGCCATAGGTAATCCCCATCAGCATCTATCATGCCCCAGCTCCTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCCATAGGTAATCCCCATCAGCATCTATCATGCCCCAGCTCCTGAC  150

seq1  AGTGCCAGTCTTCTGCAAGATTTGAACCACAGCAGGTGGGGCTTCCCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCAGTCTTCTGCAAGATTTGAACCACAGCAGGTGGGGCTTCCCCAG  200

seq1  CTCCTTCTCACTTCTTGTTTCGACACACTCAGCATCAGTCTCTCACAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTCACTTCTTGTTTCGACACACTCAGCATCAGTCTCTCACAGAA  250

seq1  GTGTTTTTCTTTGTGTTTATGGTGAATTCATTTCGAACACTGTTGTAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTTCTTTGTGTTTATGGTGAATTCATTTCGAACACTGTTGTAATC  300

seq1  AACACCCATGAATACTTCAATAATATGGTACAACTCAGAGGTAGACCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCCATGAATACTTCAATAATATGGTACAACTCAGAGGTAGACCCAT  350

seq1  AGATAAGGGCAGTTGTGTATGCATAATGCTCTGCTTTAAAAAAATATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGGGCAGTTGTGTATGCATAATGCTCTGCTTTAAAAAAATATATA  400

seq1  ATTATATTCTATATATTCTAGATACAATTATATATAAATTTATATATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTCTATATATTCTAGATACAATTATATATAAATTTATATATAAT  450

seq1  AATAACATTTCTTCCCTCCATGCCCTTCCTCCATACCCTCTCATATACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACATTTCTTCCCTCCATGCCCTTCCTCCATACCCTCTCATATACCT  500

seq1  CTCCTTGATCTCTTTCAAATTCATGCCCTCTTTTGTGGTAATAATTATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGATCTCTTTCAAATTCATGCCCTCTTTTGTGGTAATAATTATTA  550

seq1  TATGCATATATATATATATATATATATATATTTCGTAGTGTAATGAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATATATATATATATATATATATATATTTCGTAGTGTAATGAAAAT  600

seq1  CTTTTTCTTCTTAAATGAGAAAATCAAATTATTGAAGACAATGTGTTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTTCTTAAATGAGAAAATCAAATTATTGAAGACAATGTGTTGAT  650

seq1  TTAAAGAGGTATATATGGTGCTTTGAAGTTCATAATTATGACTGTAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGGTATATATGGTGCTTTGAAGTTCATAATTATGACTGTAATAA  700

seq1  CTACATCCTGTTATTTTTCTCCTCAGTGTAAAAACAATTTTATATTGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATCCTGTTATTTTTCTCCTCAGTGTAAAAACAATTTTATATTGCAA  750

seq1  TATTTCATATGCACTGTGGGACATTTAAAACCACATCCACAATCTATTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATATGCACTGTGGGACATTTAAAACCACATCCACAATCTATTCC  800

seq1  ACATTCCTTTCAAATGATGCTCCCTAATTCCTGCACTTCAACATGGGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCCTTTCAAATGATGCTCCCTAATTCCTGCACTTCAACATGGGCTA  850

seq1  CAACTTGGGGACCTGCCTTTTGACAAATAGAGGATACTGAGTTTAAGGAT  900
      ||||||||||||||||||||||||||||||||||||||||| |||||| |
seq2  CAACTTGGGGACCTGCCTTTTGACAAATAGAGGATACTGAG-TTAAGG-T  898

seq1  TTGGTTAAAGAAAGGGGTGTTTTTCATTGTTCCCTCCACATCCTCACTCA  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TTGGTTAAAGAAAGGGGTGTTTTTCATTGTTCCCT-CACATCCTCACTCA  947

seq1  CTACAGGACAGTCTGCCATACTGTTAACTATGCTATGAGAAGACTTACCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGGACAGTCTGCCATACTGTTAACTATGCTATGAGAAGACTTACCC  997

seq1  GAAAGGAACTGAAGCTTCAGTCCGGC-TGTGAGGAGCTGAAGCCTGCCAA  1049
      |||||| ||||||||||||||||||| |||||||||||| || |||||||
seq2  GAAAGG-ACTGAAGCTTCAGTCCGGCTTGTGAGGAGCTG-AGGCTGCCAA  1045

seq1  TAACCCGGTCAGTGAGCTCAGACATGAAGCTCTTAGCTTCCAACAAATAT  1099
      ||||||||||||||||||||||| || ||||| |||||||  || |||| 
seq2  TAACCCGGTCAGTGAGCTCAGAC-TG-AGCTC-TAGCTTC--AC-AATA-  1088

seq1  TGTGATGTTATGGCCATGAC  1119
      ||||||||||||||||||||
seq2  TGTGATGTTATGGCCATGAC  1108

seq1: chr18_59086172_59087349
seq2: B6Ng01-038L14.g_69_1222 (reverse)

seq1  AGTGTAGATGGGGTGCCTGAGATGAGAGGTGGTTAAGAACGTTGTTTAAT  50
      |||| |||| || |||||| |||| ||||||||| ||||||||| |||||
seq2  AGTG-AGAT-GGATGCCTG-GATG-GAGGTGGTT-AGAACGTTG-TTAAT  44

seq1  GTCACACCCCTAGCAACAGATAGATATATAATAGT-TATTTAATATAGCA  99
          |||||||||||  ||||||   ||| ||| | |||| |||  ||||
seq2  ----CACCCCTAGCACAAGATAG---TATTATATTGTATTAAATTAAGCA  87

seq1  TATCCCCTACACTAAACTGTGATTATGTTCTCTAAATTGCGGTCTGTGAA  149
      | |||| |||||| |||||||| ||||||||||||||||| |||| ||||
seq2  T-TCCCTTACACT-AACTGTGA-TATGTTCTCTAAATTGC-GTCT-TGAA  132

seq1  ATCCTAAATATGTGGAAACAAGAGTAAGTATTTCCAAGGAATGCTGTAAC  199
      ||||| |||||||||||   ||||||||||||||||||||||||||||||
seq2  ATCCT-AATATGTGGAA--CAGAGTAAGTATTTCCAAGGAATGCTGTAAC  179

seq1  ACGTAACACTAAAATTAAGAACAAAATATGAACTATAATTCAAAGAGTTC  249
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACGTAACACT-AAATTAAGAACAAAATATGAACTATAATTCAAAGAGTTC  228

seq1  ATTTGAAAAATACTAACTTCTTCATGCTTATTCAAACATGTTTTTCAGTG  299
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTGAAAAATACTAACTTCTTCATGCTTATTCAAACATGTTTTTCAGTG  277

seq1  TTTGAAAATTTTTGCCTTGGAAAGTCTTGAAAAGGAAACTGTGGATGTCT  349
      |||||||||||||||| |||||||||||||||| ||||||||||||||||
seq2  TTTGAAAATTTTTGCC-TGGAAAGTCTTGAAAA-GAAACTGTGGATGTCT  325

seq1  TGAAACAGTATTCCTTACTAGTAAGGAATAGTAAGCTCTTAACATGAAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACAGTATTCCTTACTAGTAAGGAATAGTAAGCTCTTAACATGAAGT  375

seq1  TATTTTATAAGATGAAGCAGTGTTATGATATTTTCACATGGTAAATAATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATAAGATGAAGCAGTGTTATGATATTTTCACATGGTAAATAATT  425

seq1  TACCATGACCATAAACTATGGTTTTGTAAAGAAAAAAAATGTAATGAAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGACCATAAACTATGGTTTTGTAAAGAAAAAAAATGTAATGAAAA  475

seq1  CTTGCAGCAAAATTCAAAACAAACCAGGGCTTTGGTACTGAAGTGGTATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGCAAAATTCAAAACAAACCAGGGCTTTGGTACTGAAGTGGTATC  525

seq1  TACTAACTAGGAAGATATCTCATATTGTTCTGATCAGTCATCTTTTCAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACTAGGAAGATATCTCATATTGTTCTGATCAGTCATCTTTTCAGA  575

seq1  TCTATTCCTTCATCTTATTCTGAATTATATTAAACTTGAGGGAATATATG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCCTTCATCTTATTCTGAATTATATTAAACTTGAGGGAATATATG  625

seq1  ATGTGGCTTATGTAAATATAAGTCTCATGATGACTGGCGATTGCCTGAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCTTATGTAAATATAAGTCTCATGATGACTGGCGATTGCCTGAGA  675

seq1  GAATCAATCTTTACTTTGATTTTCTACTTTTCCTTCTAGGAAAGATTTCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAATCTTTACTTTGATTTTCTACTTTTCCTTCTAGGAAAGATTTCT  725

seq1  GTGTGCACAAAGATGAGCCATGTGACACTGTGGGTAAGTATCTCTGAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCACAAAGATGAGCCATGTGACACTGTGGGTAAGTATCTCTGAAAA  775

seq1  AAATCAGTTTGAGGCACACTGGAGAACTTAAATGGATCAGTTGTTTAATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTTTGAGGCACACTGGAGAACTTAAATGGATCAGTTGTTTAATG  825

seq1  TAGTAAATTATTTGATGGTGTTGACTTGGATGGAATAATTTTGCAATGTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAATTATTTGATGGTGTTGACTTGGATGGAATAATTTTGCAATGTC  875

seq1  GTATGCATATTTATTGCAACTATATGTTAATTCTGATGTTAGCCCTGCAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGCATATTTATTGCAACTATATGTTAATTCTGATGTTAGCCCTGCAG  925

seq1  TTCTTTATAGTGATACAGATTAAAATCATACATAACCTATGCAGTGGAGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTATAGTGATACAGATTAAAATCATACATAACCTATGCAGTGGAGA  975

seq1  GATTTTTACATGTCTTTTAAGATTTTTATCAATTTTTAATATTTTACCCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTACATGTCTTTTAAGATTTTTATCAATTTTTAATATTTTACCCA  1025

seq1  AAGTTACACAGATAGTCAATAACATTTTATTCTTTCTCCCATCACAAGTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTACACAGATAGTCAATAACATTTTATTCTTTCTCCCATCACAAGTC  1075

seq1  GAAATACATTTATAGCATGAGAACAGATTATATTGGAGTCATATAATGCT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATACATTTATAGCATGAGAACAGATTATATTGGAGTCATATAATGCT  1125

seq1  TCAAGTTCTTAGAGTATAAAAAAGAATTC  1178
      |||||||||||||||||||||||||||||
seq2  TCAAGTTCTTAGAGTATAAAAAAGAATTC  1154