BAC Information

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BAC

Clone NameB6Ng01-041L12
Chromosome18 (Build37)
Map Location 59,467,461 - 59,622,564
singlet/doubletdoublet
Overlap gene4833446K15Rik
Upstream geneSlc27a6, Isoc1, Adamts19, A730017C20Rik
Downstream geneLOC667549, EG240327, LOC546714, EG225594, F830016B08Rik, LOC667578, EG667584, LOC435565, Iigp1, EG629292, LOC667597
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041L12.bB6Ng01-041L12.g
ACCDH868298DH868299
length966860
definitionDH868298|Mus musculus domesticus DNA, BAC clone: B6Ng01-041L12, 5' end.DH868299|Mus musculus domesticus DNA, BAC clone: B6Ng01-041L12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,467,461 - 59,468,424)(59,621,705 - 59,622,564)
sequence
gaattctttactttttacattcattcatactgttgatactcacgtagctg
ttacttaataagaatctctgtagccattactaaaaatacagagtcagaat
tttagaattatttctttggagggattttaatataatcacattatacaccc
cttcactttcctcctccaaaaccttacatatacccttcctggttctcttt
taatgtcatggcttctttgtttcaatactgttgaaattcttaatttatat
tgaaattgttcatatatatgaggaaatattcgtagtaaagaaatgcaact
tgttcaatctgaaagtcagttttctttaaaaaaaaaaaaaaacccacggt
ctcaaattccttagcatttggttctgtaaatacaataaagacacatacta
aaatacaaatagctgggaaagataaaataatgccacctcgagaaaggaaa
tgatcacatgcatggcataagatcatgtctgacacacacctcctgagatc
attgctggtcacagaatctactcatattacctgggataaattctactcct
tattccagtatcccaaattcaatgatacacaactcaaatttatctttttt
taagatattgtttggtttttatctcatcttcctgcttaagggcatcacca
ccttcttagctgtcaatgtttaacatctttgtagcacgtatgcctttcct
catcattcagaaggatactaacccatgatttgtgtggaattgtacaacat
tggctgccttcctgcagttgatcccccacctcctgcagataccctttaca
actgtaggtcttatctcagccatgtctgctcttgtcctgagatgccttca
tccacagtgattcccttgagccgtgagcagatggtttgggtgctaccttg
cctgtgttctttctcactgtgtgccttcctcctttctctggaaatctagc
cctcccaaaccacaag
gaattccataggggtcatgacccacaggttaagagccattgttctaggca
tgttataagattatctcaattaatatttagtgagagatcaggacaggggt
actgttgttttatccagtttcccaaataagaaggctgaggtataagaggt
aatatagaggtatagggttacagctgacagattcatccttccaaaccaaa
catgagcttagcttgtgatccaaactccttactataaacaggcttcccca
gagaccttctgatttccagactcctgcctaggaaaaatcattttagaacc
ctggcctgtggcttaagaaaaagcctttaaaacaaatgtagtaagtgtgt
tggtttctctttttgttttgaggattatttttacctagaaatgggatgac
acatcacatccagactcaaaccctgttgctttcactttatgagccccata
caccaattttgatggtacaaagctccaaatgccagataactagggacagc
ctgtgcaatagagttataataacttaaattagccagcctataaacagcct
gcaaattatccccatcttccgttccatatgtagcctctcctgaaagttgc
aaattcctgcttcctctttcagaatcaatcccttgtgggtcatgcctaga
agcctcctctgagttgtaatgtcattgtgttatagtcttcttcagaaagg
gtatttaacagttataaaacaaatggcattgtgtgcaggatgtctggctt
tgactgctgatttaatttctcagaattccagactgtcttccataggatta
gtttttgaacttgagttctggcttgttactctcatgggtctgccagcaga
gccaatgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_59467461_59468424
seq2: B6Ng01-041L12.b_46_1011

seq1  GAATTCTTTACTTTTTACATTCATTCATACTGTTGATACTCACGTAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTACTTTTTACATTCATTCATACTGTTGATACTCACGTAGCTG  50

seq1  TTACTTAATAAGAATCTCTGTAGCCATTACTAAAAATACAGAGTCAGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAATAAGAATCTCTGTAGCCATTACTAAAAATACAGAGTCAGAAT  100

seq1  TTTAGAATTATTTCTTTGGAGGGATTTTAATATAATCACATTATACACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAATTATTTCTTTGGAGGGATTTTAATATAATCACATTATACACCC  150

seq1  CTTCACTTTCCTCCTCCAAAACCTTACATATACCCTTCCTGGTTCTCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTTTCCTCCTCCAAAACCTTACATATACCCTTCCTGGTTCTCTTT  200

seq1  TAATGTCATGGCTTCTTTGTTTCAATACTGTTGAAATTCTTAATTTATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTCATGGCTTCTTTGTTTCAATACTGTTGAAATTCTTAATTTATAT  250

seq1  TGAAATTGTTCATATATATGAGGAAATATTCGTAGTAAAGAAATGCAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTGTTCATATATATGAGGAAATATTCGTAGTAAAGAAATGCAACT  300

seq1  TGTTCAATCTGAAAGTCAGTTTTCTTTAAAAAAAAAAAAAAACCCACGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAATCTGAAAGTCAGTTTTCTTTAAAAAAAAAAAAAAACCCACGGT  350

seq1  CTCAAATTCCTTAGCATTTGGTTCTGTAAATACAATAAAGACACATACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATTCCTTAGCATTTGGTTCTGTAAATACAATAAAGACACATACTA  400

seq1  AAATACAAATAGCTGGGAAAGATAAAATAATGCCACCTCGAGAAAGGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACAAATAGCTGGGAAAGATAAAATAATGCCACCTCGAGAAAGGAAA  450

seq1  TGATCACATGCATGGCATAAGATCATGTCTGACACACACCTCCTGAGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACATGCATGGCATAAGATCATGTCTGACACACACCTCCTGAGATC  500

seq1  ATTGCTGGTCACAGAATCTACTCATATTACCTGGGATAAATTCTACTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGGTCACAGAATCTACTCATATTACCTGGGATAAATTCTACTCCT  550

seq1  TATTCCAGTATCCCAAATTCAATGATACACAACTCAAATTTATCTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCAGTATCCCAAATTCAATGATACACAACTCAAATTTATCTTTTTT  600

seq1  TAAGATATTGTTTGGTTTTTATCTCATCTTCCTGCTTAAGGGCATCACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATATTGTTTGGTTTTTATCTCATCTTCCTGCTTAAGGGCATCACCA  650

seq1  CCTTCTTAGCTGTCAATGTTTAACATCTTTGTAGCACGTATGCCTTTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTAGCTGTCAATGTTTAACATCTTTGTAGCACGTATGCCTTTCCT  700

seq1  CATCATTCAGAAGGATACTAACCCATGATTTGTGTGGAATTGTACAACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTCAGAAGGATACTAACCCATGATTTGTGTGGAATTGTACAACAT  750

seq1  TGGCTGCCTTCCTGCAGTTGATCCCCCACCTCCTGCAGATACCCTTTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCCTTCCTGCAGTTGATCCCCCACCTCCTGCAGATACCCTTTACA  800

seq1  ACTGTAGGTCTTATCTCAGCCATGTCTGCTCTTGTCCTGAGATGCCTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGGTCTTATCTCAGCCATGTCTGCTCTTGTCCTGAGATGCCTTCA  850

seq1  TCCACAGTGATTTCCATGAGCCGTGAGCAGATGGTTTGGGTGCTACCTTG  900
      |||||||||||| || ||||||||||||||||||||||||||||||||||
seq2  TCCACAGTGATTCCCTTGAGCCGTGAGCAGATGGTTTGGGTGCTACCTTG  900

seq1  CCTGTGTTCTTTCTCACTGTGTGCCTTCCTCCTTTCTCTGGAAA-CCAGC  949
      |||||||||||||||||||||||||||||||||||||||||||| | |||
seq2  CCTGTGTTCTTTCTCACTGTGTGCCTTCCTCCTTTCTCTGGAAATCTAGC  950

seq1  ACTCCC-AACCACATG  964
       ||||| ||||||| |
seq2  CCTCCCAAACCACAAG  966

seq1: chr18_59621705_59622564
seq2: B6Ng01-041L12.g_69_928 (reverse)

seq1  AGACATTGGCTCTGCTGGCAGACCCATGAGAGTAACAAGCCAGAACTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATTGGCTCTGCTGGCAGACCCATGAGAGTAACAAGCCAGAACTCAA  50

seq1  GTTC-AAAACTAATCCTATGGAAGACAGTCTGGAATTACTGAGAAATTAA  99
      |||| |||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTTCAAAAACTAATCCTATGGAAGACAGTCTGGAATT-CTGAGAAATTAA  99

seq1  ATCAGCAGTCAAAGCCAGACATCCTGCACACAATGCCATTTGTTTTATAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCAGTCAAAGCCAGACATCCTGCACACAATGCCATTTGTTTTATAA  149

seq1  CTGTTAAATACCCTTTCTGAAGAAGACTATAACACAATGACATTACAACT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAAATACCCTTTCTGAAGAAGACTATAACACAATGACATTACAACT  199

seq1  CAGAGGAGGCTTCTAGGCATGACCCACAAGGGATTGATTCTGAAAGAGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAGGCTTCTAGGCATGACCCACAAGGGATTGATTCTGAAAGAGGA  249

seq1  AGCAGGAATTTGCAACTTTCAGGAGAGGCTACATATGGAACGGAAGATGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAATTTGCAACTTTCAGGAGAGGCTACATATGGAACGGAAGATGG  299

seq1  GGATAATTTGCAGGCTGTTTATAGGCTGGCTAATTTAAGTTATTATAACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATTTGCAGGCTGTTTATAGGCTGGCTAATTTAAGTTATTATAACT  349

seq1  CTATTGCACAGGCTGTCCCTAGTTATCTGGCATTTGGAGCTTTGTACCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGCACAGGCTGTCCCTAGTTATCTGGCATTTGGAGCTTTGTACCAT  399

seq1  CAAAATTGGTGTATGGGGCTCATAAAGTGAAAGCAACAGGGTTTGAGTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATTGGTGTATGGGGCTCATAAAGTGAAAGCAACAGGGTTTGAGTCT  449

seq1  GGATGTGATGTGTCATCCCATTTCTAGGTAAAAATAATCCTCAAAACAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGATGTGTCATCCCATTTCTAGGTAAAAATAATCCTCAAAACAAA  499

seq1  AAGAGAAACCAACACACTTACTACATTTGTTTTAAAGGCTTTTTCTTAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAAACCAACACACTTACTACATTTGTTTTAAAGGCTTTTTCTTAAG  549

seq1  CCACAGGCCAGGGTTCTAAAATGATTTTTCCTAGGCAGGAGTCTGGAAAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGGCCAGGGTTCTAAAATGATTTTTCCTAGGCAGGAGTCTGGAAAT  599

seq1  CAGAAGGTCTCTGGGGAAGCCTGTTTATAGTAAGGAGTTTGGATCACAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGTCTCTGGGGAAGCCTGTTTATAGTAAGGAGTTTGGATCACAAG  649

seq1  CTAAGCTCATGTTTGGTTTGGAAGGATGAATCTGTCAGCTGTAACCCTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCTCATGTTTGGTTTGGAAGGATGAATCTGTCAGCTGTAACCCTAT  699

seq1  ACCTCTATATTACCTCTTATACCTCAGCCTTCTTATTTGGGAAACTGGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTATATTACCTCTTATACCTCAGCCTTCTTATTTGGGAAACTGGAT  749

seq1  AAAACAACAGTACCCCTGTCCTGATCTCTCACTAAATATTAATTGAGATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAACAGTACCCCTGTCCTGATCTCTCACTAAATATTAATTGAGATA  799

seq1  ATCTTATAACATGCCTAGAACAATGGCTCTTAACCTGTGGGTCATGACCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATAACATGCCTAGAACAATGGCTCTTAACCTGTGGGTCATGACCC  849

seq1  CTATGGAATTC  860
      |||||||||||
seq2  CTATGGAATTC  860