BAC Information

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BAC

Clone NameB6Ng01-042J15
Chromosome18 (Build37)
Map Location 18,293,006 - 18,293,970
singlet/doubletsinglet
Overlap genenone
Upstream gene4921533I20Rik, LOC100040647
Downstream geneLOC100040658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042J15.bB6Ng01-042J15.g
ACCDH868926DH868927
length1,124962
definitionDH868926|Mus musculus domesticus DNA, BAC clone: B6Ng01-042J15, 5' end.DH868927|Mus musculus domesticus DNA, BAC clone: B6Ng01-042J15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagaattttttcctgaaagtgtgttagatacttgtcaaatgct
ttctcagcatctaataaaatgatcatgtgttttttctctttgagattttt
ttttaatattgtggattacattgatggattaccatatattgaatcatccc
tgcatccttgggatgaagcctacttgatcatgatggatgatctttttgat
gtgatcttggatttggtttgcaagaattttattgagttttttggcatcaa
gattcataagggaaattagtttgaatttctctttctttgttggatctttg
tgtggtttaggtatcagagtaattgtggcttcatagaatgaattggatca
tgtttcttctgattctagtctgtggaattaatttgaagagtattggtatt
agatatttcttgaatgtctgatagcactctgcactaaattcatctggtgc
tggacttttattggttgggaaactattaataaacttttttatttctttca
gggttatgggacagttttgatcatttatgtgattttgatttaactttggt
acctggtatctgtctagaaaattgtccattgcattcagattttacagttg
cgttgagtatatgcttttgtagtaggctttggtgattttttttggatttc
ctcactttctgttgttatatctcccttttaaattttgattttgtagattt
ggataatatctctgtaacctctgattagtttgactaaaggtttatctatc
tttttgatttttctcaaagaaccagttcctgctttgattgattcttttta
tagttcttttccttttatcaattcttgatgtaagagcatgagccactaga
gttctgtttaggaaattttcctatctgagatgagtttaaggctctatacc
atttttctcctctgttagattcatatctctggtttatgatgttgcctttg
ttccacttggacttgagattgtgcaaggtgataaatatgggtctatttta
atttttctacatacttgacagccagttagaagtagcacctttttgaagaa
tgcttttctttttcattgacattttggctaattggtaagataaagtgtct
gtaagtgtgtgtggtggtcgtgtc
gaattcccctacactggggcattgagccttcacaggaccatgggctctcc
tcccattcagggctatcctctgctacatatgcagctggagccatgggtcc
ctacatgtgtactccttggttggttgtttagtccctgggaggtctggggg
ttctggttggttggtatagttgttcttcctatggggttacaaacctattc
atctccttcagtcttttctctaactcctccattgaagacctcatgctcag
aacagtggttggctatgagcatctgcctctgtatctctcaggctctggca
gaaccactcaggaaacagctatatcagactcctgttattatgcacttctt
gacatccacaatagtgtctgggttttgtatatgggatggatcaccaggtg
ggacagtcttttcatggcctttcctccagtctctgctccacttttaatga
atttctatctgtgggccaacaatatgtctttattggtaaatgtcttgctg
tcaaaccttgtagccttgagtttgttttatatgggatatgtgttttacac
acacacacacacacacacacacacacacacacacacacacacagaaagag
acagagagagagagagacagagagagacagagagacagagacagagacag
agagacagagacagagagacagagagagaggaggataatcacaataatta
gaatttctaatctttttttttgcccatctattcttgcaaaacataggtat
ctatttaaatatcaagtctattttccacatttacctttctttttaatact
gcacttcaccagtcatccagttatactcagaaatgaatagaacacggata
attaaaaagcaaatatattcatggaaaatttgtgaatgaaatgcccagta
ttagtcctgggttttggagtatgatgctacatactagcatagtaaatgtt
gagaaatcctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_18293006_18293970
seq2: B6Ng01-042J15.g_65_1026 (reverse)

seq1  GTAGGATTTCTCAACATTTAACTATGCTAGTATGTAGCATCATACTCCAA  50
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GTAGGATTTCTCAACATTT-ACTATGCTAGTATGTAGCATCATACTCCAA  49

seq1  AAGCCAGGACTAATACTGGGCATTTCATTCACAAAATTTTCCATGAATAT  100
      || ||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AACCCAGGACTAATACTGGGCATTTCATTCAC-AAATTTTCCATGAATAT  98

seq1  ATTTGCTTTTTAATTATCCGTGTTCTATTCATTTCTGAGTATAACTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTTTTAATTATCCGTGTTCTATTCATTTCTGAGTATAACTGGAT  148

seq1  GACTGGTGAAGTGCAGTATTAAAAAGAAAGGTAAATGTGGAAAATAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGTGAAGTGCAGTATTAAAAAGAAAGGTAAATGTGGAAAATAGACT  198

seq1  TGATATTTAAATAGATACCTATGTTTTTGCAAGAATAGATGGGCAAAAAA  250
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGATATTTAAATAGATACCTATG-TTTTGCAAGAATAGATGGGCAAAAAA  247

seq1  AAAGATTAGAAATTCTAATTATTGTGATTATCCTCCTCTCTCTCTGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATTAGAAATTCTAATTATTGTGATTATCCTCCTCTCTCTCTGTCTC  297

seq1  TCTGTCTCTGTCTCTCTGTCTCTGTCTCTGTCTCTCTGTCTCTCTCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTGTCTCTCTGTCTCTGTCTCTGTCTCTCTGTCTCTCTCTGTC  347

seq1  TCTCTCTCTCTCTGTCTCTTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTGTCTCTTTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG  397

seq1  TGTGTGTGTGTGTGTGTGTAAAACACATATCCCATATAAAACAAACTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTAAAACACATATCCCATATAAAACAAACTCAA  447

seq1  GGCTACAAGGTTTGACAGCAAGACATTTACCAATAAAGACATATTGTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACAAGGTTTGACAGCAAGACATTTACCAATAAAGACATATTGTTGG  497

seq1  CCCACAGATAGAAATTCATTAAAAGTGGAGCAGAGACTGGAGGAAAGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGATAGAAATTCATTAAAAGTGGAGCAGAGACTGGAGGAAAGGCC  547

seq1  ATGAAAAGACTGTCCCACCTGGTGATCCATCCCATATACAAAACCCAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGACTGTCCCACCTGGTGATCCATCCCATATACAAAACCCAGAC  597

seq1  ACTATTGTGGATGTCAAGAAGTGCATAATAACAGGAGTCTGATATAGCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTGTGGATGTCAAGAAGTGCATAATAACAGGAGTCTGATATAGCTG  647

seq1  TTTCCTGAGTGGTTCTGCCAGAGCCTGAGAGATACAGAGGCAGATGCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGAGTGGTTCTGCCAGAGCCTGAGAGATACAGAGGCAGATGCTCA  697

seq1  TAGCCAACCACTGTTCTGAGCATGAGGTCTTCAATGGAGGAGTTAGAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAACCACTGTTCTGAGCATGAGGTCTTCAATGGAGGAGTTAGAGAA  747

seq1  AAGACTGAAGGAGATGAATAGGTTTGTAACCCCATAGGAAGAACAACTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGAAGGAGATGAATAGGTTTGTAACCCCATAGGAAGAACAACTAT  797

seq1  ACCAACCAACCAGAACCCCCAGACCTCCCAGGGACTAAACAACCAACCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAACCAGAACCCCCAGACCTCCCAGGGACTAAACAACCAACCAA  847

seq1  GGAGTACACATGTAGGGACCCATGGCTCCAGCTGCATATGTAGCAGAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTACACATGTAGGGACCCATGGCTCCAGCTGCATATGTAGCAGAGGA  897

seq1  TAGCCCTGAATGGGAGGAGAGCCCATGGTCCTGTGAAGGCTCAATGCCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTGAATGGGAGGAGAGCCCATGGTCCTGTGAAGGCTCAATGCCCC  947

seq1  AGTGTAGGGGAATTC  965
      |||||||||||||||
seq2  AGTGTAGGGGAATTC  962