BAC Information

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BAC

Clone NameB6Ng01-043E24
Chromosome18 (Build37)
Map Location 4,613,906 - 4,615,066
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC435549, EG664867, LOC621666, Lyzl1, LOC383374, LOC664909, Map3k8, Papd1, EG664931, LOC100039354
Downstream geneLOC433157, 9430020K01Rik, LOC268988, Svil, Zfp438, LOC100039442, Zeb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043E24.bB6Ng01-043E24.g
ACCDH869414DH869415
length1,1391,165
definitionDH869414|Mus musculus domesticus DNA, BAC clone: B6Ng01-043E24, 5' end.DH869415|Mus musculus domesticus DNA, BAC clone: B6Ng01-043E24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggattaccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagcctgaagctggaaagaacccagat
gcccctcaacagaggaatggatacagtaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggagctcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctctttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggatcatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagatttatcgaaag
gacccagatgtagctgtctcttgtgagactatgccgggacctagcaaccc
agaagtggatgctcatagtcagctatggatggatcacagggctcccaatg
taggagctgagaaataccaaggactaacggatctgcaaccttatagtgac
acatgatgaactaccagaccccggactctgactctagctacatagtacaa
agaagcctagtggcatcatgtagatagcccattgacacgctaacttaatg
tccctacaggaccctggccaaaatgggatttgtctagca
gaattcttgtatgacccttttagacagactggactggcccaacatcagtt
ttctgagtgggccataacttttcatctctatactttgaagtcacacagca
gattcctcagttttggcagctatttgcctgctataggactcctgttgtcc
agcagaaacaacggaatagggacagctgatcagccctcgtgtttgaggct
caactactatgttttggatagaattcaattgtacccctcaaggcttcagg
tgttgacattcagtccccactgtgagcacatctcacgtatctcattgcag
caatggaaagctgactaacaggagcattgaataggatcctggttcctcct
attaagaataacatagcggggttggggatttagctcagtggtagagtgct
tgcctagcaagcgcaaggccctgggttcggtcctcagctctggaaaaaaa
agaaaaaaaaaaaaaagaataacatagagaagcaaagtcatgttccagat
tcttctccactccttgtatctttttgcaagagaggcagtggtgcctgatt
tacaagtctgagacaacgagctgagcatactcagccagcatcctcctcct
cctcctccttctctttgaatcaacacacattcttgacaagttctctaagt
tatggagcattcgtttttgttgttggctaggaaagcctgtctattgagaa
gttggatggttaatatttcattgccaaattgacagtatctagaattaccc
aggagagaggcctctaggcatacctgtgagggattatctggattaagcta
tcccctgagagaatgtctaagaagaattatctttcactatgttcaatgac
taggaaaactttctcagctgtagggcaaggcagttcctggattatggaaa
gagagaaagtgagccacgcaccccccttgtttctgcttcttgaccgtgcg
tgccatgtgaccagctccctcataactcactctgctgtgacttcctgcca
cagcagtctgtaccaacaggcctgcaccttttcttccctgttatcagggt
actaaacacaaccaagggaaaggacttacaccacaattaagtcccacgtg
tttgtgttattttgttttctgaaaaaggttcactatggcatctcagctga
cctgagattactatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_4613906_4615066
seq2: B6Ng01-043E24.g_67_1231 (reverse)

seq1  CATAGTGAATCTCAGGTCAGCTAGAG-TGACATAGTGAGACCCTGTCTCA  49
      |||||| ||||||||||||||| ||| || ||||||  || ||| | |||
seq2  CATAGT-AATCTCAGGTCAGCT-GAGATGCCATAGT--GAACCTTTTTCA  46

seq1  GAAAAACAAAAATAAACAAA-ACAGTGGACTTAATTGTTGTGTTAGGTCC  98
      | |||||||||  | ||||| ||   |||||||||||| ||| || ||||
seq2  G-AAAACAAAATAACACAAACACGTGGGACTTAATTGTGGTG-TAAGTCC  94

seq1  TTTCCCTTTGTTGTGTTAAGTACCCTGATAACAGGGA--GAAAGGTGCA-  145
      |||||||| |||||||| |||||||||||||||||||   ||||||||| 
seq2  TTTCCCTTGGTTGTGTTTAGTACCCTGATAACAGGGAAGAAAAGGTGCAG  144

seq1  GCCTGTGGTTACAGACTGCTGTGGCAGGGAGTCACAGCAGAGTGAG-TAT  194
      |||||| | ||||||||||||||||||| ||||||||||||||||| |||
seq2  GCCTGTTGGTACAGACTGCTGTGGCAGGAAGTCACAGCAGAGTGAGTTAT  194

seq1  GAGGGAGCTGGTCACATGGCACGCACGGTCAAGAAGCAGAAACAA-GGGG  243
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GAGGGAGCTGGTCACATGGCACGCACGGTCAAGAAGCAGAAACAAGGGGG  244

seq1  GTGCGTGGCTCACTTTCTCTCTTTCCATAATCCAGGAACTGCCCTG-CCT  292
      ||||||||||||||||||||||||||||||||||||||||||| || |||
seq2  GTGCGTGGCTCACTTTCTCTCTTTCCATAATCCAGGAACTGCCTTGCCCT  294

seq1  ACAGCTGAGATAGTTTTCCTAGTCATTGAACATAGTG-AAGATAATTCTT  341
      |||||||||| |||||||||||||||||||||||||| ||||||||||||
seq2  ACAGCTGAGAAAGTTTTCCTAGTCATTGAACATAGTGAAAGATAATTCTT  344

seq1  CCTAGACATTCTCTCAGGGGATAGCTTAATCCAGATAATCCCTCACAGGT  391
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGACATTCTCTCAGGGGATAGCTTAATCCAGATAATCCCTCACAGGT  394

seq1  ATGCCTAGAGGCCTCTCTCCTGGGTAATTCTAGATACTGTCAATTTGGCA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTAGAGGCCTCTCTCCTGGGTAATTCTAGATACTGTCAATTTGGCA  444

seq1  ATG-AATATTAACCATCCAACTTCTCAATAGACAGGCTTTCCTAGCCAAC  490
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATATTAACCATCCAACTTCTCAATAGACAGGCTTTCCTAGCCAAC  494

seq1  AACAAAAACGAATGCTCCATAACTTAGAGAACTTGTCAAGAATGTGTGTT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAACGAATGCTCCATAACTTAGAGAACTTGTCAAGAATGTGTGTT  544

seq1  GATTCAAAGAGAAGGAGGAGGAGGAGGAGGATGCTGGCTGAGTATGCTCA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAAAGAGAAGGAGGAGGAGGAGGAGGATGCTGGCTGAGTATGCTCA  594

seq1  GCTCGTTGTCTCAGACTTGTAAATCAGGCACCACTGCCTCTCTTGCAAAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGTTGTCTCAGACTTGTAAATCAGGCACCACTGCCTCTCTTGCAAAA  644

seq1  AGATACAAGGAGTGGAGAAGAATCTGGAACATGACTTTGCTTCTCTATGT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAAGGAGTGGAGAAGAATCTGGAACATGACTTTGCTTCTCTATGT  694

seq1  TATTCTTTTTTTTTTTTTTCTTTTTTTTCCAGAGCTGAGGACCGAACCCA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTTTTTTTTTTTTCTTTTTTTTCCAGAGCTGAGGACCGAACCCA  744

seq1  GGGCCTTGCGCTTGCTAGGCAAGCACTCTACCACTGAGCTAAATCCCCAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTTGCGCTTGCTAGGCAAGCACTCTACCACTGAGCTAAATCCCCAA  794

seq1  CCCCGCTATGTTATTCTTAATAGGAGGAACCAGGATCCTATTCAATGCTC  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCTATGTTATTCTTAATAGGAGGAACCAGGATCCTATTCAATGCTC  844

seq1  CTGTTAGTCAGCTTTCCATTGCTGCAATGAGATACGTGAGATGTGCTCAC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAGTCAGCTTTCCATTGCTGCAATGAGATACGTGAGATGTGCTCAC  894

seq1  AGTGGGGACTGAATGTCAACACCTGAAGCCTTGAGGGGTACAATTGAATT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGGACTGAATGTCAACACCTGAAGCCTTGAGGGGTACAATTGAATT  944

seq1  CTATCCAAAACATAGTAGTTGAGCCTCAAACACGAGGGCTGATCAGCTGT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCAAAACATAGTAGTTGAGCCTCAAACACGAGGGCTGATCAGCTGT  994

seq1  CCCTATTCCGTTGTTTCTGCTGGACAACAGGAGTCCTATAGCAGGCAAAT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATTCCGTTGTTTCTGCTGGACAACAGGAGTCCTATAGCAGGCAAAT  1044

seq1  AGCTGCCAAAACTGAGGAATCTGCTGTGTGACTTCAAAGTATAGAGATGA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCAAAACTGAGGAATCTGCTGTGTGACTTCAAAGTATAGAGATGA  1094

seq1  AAAGTTATGGCCCACTCAGAAAACTGATGTTGGGCCAGTCCAGTCTGTCT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTATGGCCCACTCAGAAAACTGATGTTGGGCCAGTCCAGTCTGTCT  1144

seq1  AAAAGGGTCATACAAGAATTC  1161
      |||||||||||||||||||||
seq2  AAAAGGGTCATACAAGAATTC  1165