BAC Information

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BAC

Clone NameB6Ng01-045L18
Chromosome18 (Build37)10 (Build37)
Map Location 56,386,386 - 56,386,593128,816,894 - 128,817,849
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC667401, LOC667409, LOC629043, LOC100043099, LOC629057, LOC100043104
Downstream geneLOC676543, LOC667432, Gramd3, LOC667458, Aldh7a1, Rnuxa, 1700065I17Rik, LOC675171, Lmnb1, March3, C330018D20Rik, Megf10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045L18.bB6Ng01-045L18.g
ACCDH871105DH871106
length946944
definitionDH871105|Mus musculus domesticus DNA, BAC clone: B6Ng01-045L18, 5' end.DH871106|Mus musculus domesticus DNA, BAC clone: B6Ng01-045L18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(56,386,386 - 56,386,593)(128,816,894 - 128,817,849)
sequence
gaattcttcaggatctgttgttatgactcccttttcatttctgattttgt
taattaggatgctttccctgtgccctctagtgagtctggctaagggttta
tctatcttgttgattttctcaaagaaccagctcctcatttggttgattct
ttgaatagttcttgtttccacttggttgattcaattccatcacctgtttg
gttgtgttttcctgcaattctttaagggatttttgtgcttcctctttaat
gtcttctacctgttttacagtgttctcctgtatgtctttaagtgagttat
taaattccttcttgatgtcctctaccatcatcatgagatatgcttttaaa
tccgggtctagctttttgggtgtgttggggtgccctggactgggcgaagt
gggagtgctgggttctgatgatggtgagtggtcttggtttgtgttagtaa
gattcttatgtttacctttcgccatctgttaatctctggagttagttgtt
atagttgtctctgtttagagattgttcctctggtgattctgttaccctct
atcaggagacctgggacactagctctctcctctgagtttcagtggtcaga
gcactctctacaggcaagctctcctcttacatggaaggtgcacagatatc
tggcgtttggacctcctcctggcctaagatgaaagcccaaaacaggacct
ttcccagaagctgtgttgctttggcctgtcccagaagctgttagcttctg
tagtgcacactctcacctgtgcagactactttccgcggagtcctagaacc
aagatggctcccgcagatgctgaggcaaagccctcccgggccgggcagac
acctctcctctggccggggagtggcctgatgtctggagcctcagaagtgt
tgctcagagctctgtagctctgctgtccagagctatagctgctgtc
gaattcttaaaatatttgtaataaattctttctttttcattaaacattat
tatccaaaagaaaaaaaaaaagaaatcagcattgaaactctttaaagtca
caataaatggtattagatatttaccctgctgtgagtctgccagacctgga
gttggctaaagccagacacaaagttttctgacattctgacgaatgttttc
ctgacattctagctctctaactttactgaatgtttgctgataacttctta
aaagtcctaaaagctttcttgctcattctgagagttaaaaactgctggct
taggtgattaacagtgatagcctatcagagaggattaagtaaagtagcct
atgccctttctcccacaggaagttccattgatctaactcccagtttaaca
attgaagccacaggaagacaaaggaacactttgaaaagtgattttaatct
ttttaaaaacattagtagttattttctttatttacatttcaaatgttatt
cacttcccttgtttcccctccggaaaaccctctatcccatcctccctccc
tctgcttctatgagggtgttccctcgaccatctacccactctctcttccc
catcttggcattcccctacactgaggcatccagctttcataagaccaagg
gcctgtcctcccactaatgttccacaaggccgtcttctgctacatatgaa
gctggagtccctcaatgtgtactatttggttggtggtctagtccctgaga
gctctggggtgtctggttcattcatattgttttcctcctatggggctgca
aacccttcagctccttcagtcctttctcaaactcttccattggggacccg
tgctcagtcaatggtggctgtgagcatctactctgtatctgtcagctctg
cagagctctcagagacagctatgtcagactctatcaccagcact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_56386386_56386593
seq2: B6Ng01-045L18.b_48_259 (reverse)

seq1  GCAGGAA---ATAACCAAAC---TCA-GGGGTGAAATCAACCAAGTGGAA  43
      |||||||   | ||||||||   | | ||  |  ||||||||||||||||
seq2  GCAGGAAAACACAACCAAACAGGTGATGGAATTGAATCAACCAAGTGGAA  50

seq1  ACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTGA  93
      ||   |||||||||||||||||| ||||||| |||||| |||||||||||
seq2  AC---AAGAACTATTCAAAGAATCAACCAAATGAGGAGCTGGTTCTTTGA  97

seq1  GAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAAAGGGCACA  143
      |||||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  GAAAATCAACAAGATAGATAAACCCTTAGCCAGACTCACTAGAGGGCACA  147

seq1  GGGACAAAATCCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACA  193
      |||| |  |||||||||||||||||||||||||||||||||| |||||||
seq2  GGGAAAGCATCCTAATTAACAAAATCAGAAATGAAAAGGGAGTCATAACA  197

seq1  ACAGATCCTGAAGAA  208
      |||||||||||||||
seq2  ACAGATCCTGAAGAA  212

seq1: chr10_128816894_128817849
seq2: B6Ng01-045L18.g_68_1011

seq1  GAATTCTTAAAATATTTGTAATAAATTCTTTCTTTTTCATTAAACATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAATATTTGTAATAAATTCTTTCTTTTTCATTAAACATTAT  50

seq1  TATCCAAAAGAAAAAAAAAAAGAAATCAGCATTGAAACTCTTTAAAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAAAAGAAAAAAAAAAAGAAATCAGCATTGAAACTCTTTAAAGTCA  100

seq1  CAATAAATGGTATTAGATATTTACCCTGCTGTGAGTCTGCCAGACCTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAATGGTATTAGATATTTACCCTGCTGTGAGTCTGCCAGACCTGGA  150

seq1  GTTGGCTAAAGCCAGACACAAAGTTTTCTGACATTCTGACGAATGTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTAAAGCCAGACACAAAGTTTTCTGACATTCTGACGAATGTTTTC  200

seq1  CTGACATTCTAGCTCTCTAACTTTACTGAATGTTTGCTGATAACTTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACATTCTAGCTCTCTAACTTTACTGAATGTTTGCTGATAACTTCTTA  250

seq1  AAAGTCCTAAAAGCTTTCTTGCTCATTCTGAGAGTTAAAAACTGCTGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCTAAAAGCTTTCTTGCTCATTCTGAGAGTTAAAAACTGCTGGCT  300

seq1  TAGGTGATTAACAGTGATAGCCTATCAGAGAGGATTAAGTAAAGTAGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGATTAACAGTGATAGCCTATCAGAGAGGATTAAGTAAAGTAGCCT  350

seq1  ATGCCCTTTCTCCCACAGGAAGTTCCATTGATCTAACTCCCAGTTTAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTTTCTCCCACAGGAAGTTCCATTGATCTAACTCCCAGTTTAACA  400

seq1  ATTGAAGCCACAGGAAGACAAAGGAACACTTTGAAAAGTGATTTTAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGCCACAGGAAGACAAAGGAACACTTTGAAAAGTGATTTTAATCT  450

seq1  TTTTAAAAACATTAGTAGTTATTTTCTTTATTTACATTTCAAATGTTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAACATTAGTAGTTATTTTCTTTATTTACATTTCAAATGTTATT  500

seq1  CACTTCCCTTGTTTCCCCTCCGGAAAACCCTCTATCCCATCCTCCCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCCTTGTTTCCCCTCCGGAAAACCCTCTATCCCATCCTCCCTCCC  550

seq1  TCTGCTTCTATGAGGGTGTTCCCTCGACCATCTACCCACTCTCTCTTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCTATGAGGGTGTTCCCTCGACCATCTACCCACTCTCTCTTCCC  600

seq1  CATCTTGGCATTCCCCTACACTGAGGCATCCAGCTTTCATAAGACCAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGGCATTCCCCTACACTGAGGCATCCAGCTTTCATAAGACCAAGG  650

seq1  GCCTGTCCTCCCACTAATGTTCCACAAGGCCGTCTTCTGCTACATATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCCTCCCACTAATGTTCCACAAGGCCGTCTTCTGCTACATATGAA  700

seq1  GCTGGAGTCCCTCAATGTGTACTATTTGGTTGGTGGTCTAGTCCCTGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGTCCCTCAATGTGTACTATTTGGTTGGTGGTCTAGTCCCTGAGA  750

seq1  GCTCTGGGGTGTCTGGTTCATTCATATTGTTTTTCCTCCTATGGGGCTGC  800
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCTCTGGGGTGTCTGGTTCATTCATATTG-TTTTCCTCCTATGGGGCTGC  799

seq1  AAAACCCTTCAGCTCCTTCAGTCCTTTCTCAAACTCTTCCATTGGGGACC  850
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  -AAACCCTTCAGCTCCTTCAGTCCTTTCTCAAACTCTTCCATTGGGGA-C  847

seq1  CCGTGCTCAGTCCAATGGTTGGCTGTGAGCATCTACCTCTGTATCTGTCA  900
      ||||||||||| |||||| |||||||||||||||| ||||||||||||||
seq2  CCGTGCTCAGT-CAATGG-TGGCTGTGAGCATCTA-CTCTGTATCTGTCA  894

seq1  GGCTCTGGCAGAGCCTCTCAGGAGACAGCTATGTCAGACTCCTATCAACA  950
       ||||| |||||| |||||| ||||||||||||||||||| ||||| || 
seq2  -GCTCT-GCAGAG-CTCTCA-GAGACAGCTATGTCAGACT-CTATC-ACC  938

seq1  AGCACT  956
      ||||||
seq2  AGCACT  944